Richard M. Leahy

208 papers A* 2A 1B 14Misc 17Journal 94Unranked 75

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	An Approach to Simultaneous Acquisition of Real-Time MRI Video, EEG, and Surface EMG for Articulatory, Brain, and Muscle Activity During Speech Production. CoRR Jihwan Lee, Parsa Razmara, Kevin Huang, Sean Foley, Aditya Kommineni, Haley Hsu, Woojae Jeong, Prakash Kumar, Xuan Shi, Yoonjeong Lee, Tiantian Feng, Takfarinas Medani, Ye Tian, Sudarsana Reddy Kadiri, Krishna S. Nayak, Dani Byrd, Louis Goldstein, Richard M. Leahy, Shrikanth Narayanan
2026	J	`jnl`	Learning Cross-Joint Attention for Generalizable Video-Based Seizure Detection. CoRR Omar Zamzam, Takfarinas Medani, Chinmay Chinara, Richard M. Leahy
2026	J	`jnl`	Optimizing electrode placement and information capacity for local field potentials in cortex. NeuroImage Jace A. Willis, Christopher E. Wright, Ruoqian Zhu, Yilan Ruan, Joshua Stallings, Amada M. Abrego, Takfarinas Medani, Promit Moitra, Arjun Ramakrishnan, Charles E. Schroeder, Anand A. Joshi, Nitin Tandon, Richard M. Leahy, John C. Mosher, John P. Seymour
2025	J	`jnl`	Decoding Neural Signatures of Semantic Evaluations in Depression and Suicidality. CoRR Woojae Jeong, Aditya Kommineni, Kleanthis Avramidis, Colin McDaniel, Donald Berry, Myzelle Hughes, Thomas McGee, Elsi Kaiser, Dani Byrd, Assal Habibi, B. Rael Cahn, Idan A. Blank, Kristina Lerman, Dimitrios Pantazis, Sudarsana Reddy Kadiri, Takfarinas Medani, Shrikanth Narayanan, Richard M. Leahy
2025	J	`jnl`	Deep Learning Characterizes Depression and Suicidal Ideation from Eye Movements. CoRR Kleanthis Avramidis, Woojae Jeong, Aditya Kommineni, Sudarsana Reddy Kadiri, Marcus Ma, Colin McDaniel, Myzelle Hughes, Thomas McGee, Elsi Kaiser, Dani Byrd, Assal Habibi, B. Rael Cahn, Idan A. Blank, Kristina Lerman, Takfarinas Medani, Richard M. Leahy, Shrikanth Narayanan
2025	J	`jnl`	Generalizable Representation Learning for fMRI-based Neurological Disorder Identification. Trans. Mach. Learn. Res. Wenhui Cui, Haleh Akrami, Anand A. Joshi, Richard M. Leahy
2025	J	`jnl`	Informed Bootstrap Augmentation Improves EEG Decoding. CoRR Woojae Jeong, Wenhui Cui, Kleanthis Avramidis, Takfarinas Medani, Shrikanth Narayanan, Richard M. Leahy
2025	J	`jnl`	Modeling and Reversing Brain Lesions Using Diffusion Models. CoRR Omar Zamzam, Haleh Akrami, Anand A. Joshi, Richard M. Leahy
2025	J	`jnl`	Multi-Center Fetal Brain Tissue Annotation (FeTA) Challenge 2022 Results. IEEE Trans. Medical Imaging Kelly Payette, Céline Steger, Roxane Licandro, Priscille de Dumast, Hongwei Bran Li, Matthew J. Barkovich, Liu Li, Maik Dannecker, Chen Chen, Cheng Ouyang, Niccolò McConnell, Alina Dana Miron, Yongmin Li, Alena Uus, Irina Grigorescu, Paula Ramirez Gilliland, Md Mahfuzur Rahman Siddiquee, Daguang Xu, Andriy Myronenko, Haoyu Wang, Ziyan Huang, Jin Ye, Mireia Alenyà, Valentin Comte, Oscar Camara, Jean-Baptiste Masson, Astrid Nilsson, Charlotte Godard, Moona Mazher, Abdul Qayyum, Yibo Gao, Hangqi Zhou, Shangqi Gao, Jia Fu, Guiming Dong, Guotai Wang, ZunHyan Rieu, HyeonSik Yang, Minwoo Lee, Szymon Plotka, Michal K. Grzeszczyk, Arkadiusz Sitek, Luisa Vargas Daza, Santiago Usma, Pablo Arbeláez, Wenying Lu, Wenhao Zhang, Jing Liang, Romain Valabrègue, Anand A. Joshi, Krishna N. Nayak, Richard M. Leahy, Luca Wilhelmi, Aline Dändliker, Hui Ji, Antonio G. Gennari, Anton Jakovcic, Melita Klaic, Ana Adzic, Pavel Markovic, Gracia Grabaric, Gregor Kasprian, Gregor Dovjak, Milan Rados, Lana Vasung, Meritxell Bach Cuadra, András Jakab
2025	J	`jnl`	Neural Codecs as Biosignal Tokenizers. CoRR Kleanthis Avramidis, Tiantian Feng, Woojae Jeong, Jihwan Lee, Wenhui Cui, Richard M. Leahy, Shrikanth Narayanan
2025	J	`jnl`	Neural Responses to Affective Sentences Reveal Signatures of Depression. CoRR Aditya Kommineni, Woojae Jeong, Kleanthis Avramidis, Colin McDaniel, Myzelle Hughes, Thomas McGee, Elsi Kaiser, Kristina Lerman, Idan A. Blank, Dani Byrd, Assal Habibi, B. Rael Cahn, Sudarsana Kadiri, Takfarinas Medani, Richard M. Leahy, Shrikanth Narayanan
2024	Misc	`conf`	Beta Quantile Regression for Robust Estimation of Uncertainty in the Presence of Outliers. ICASSP Haleh Akrami, Omar Zamzam, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy
2024	J	`jnl`	Generalizable Representation Learning for fMRI-based Neurological Disorder Identification. CoRR Wenhui Cui, Haleh Akrami, Anand A. Joshi, Richard M. Leahy
2024	—	`conf`	Knowledge-guided EEG Representation Learning. EMBC Aditya Kommineni, Kleanthis Avramidis, Richard M. Leahy, Shrikanth Narayanan
2024	J	`jnl`	Knowledge-guided EEG Representation Learning. CoRR Aditya Kommineni, Kleanthis Avramidis, Richard M. Leahy, Shrikanth Narayanan
2024	—	`conf`	Neuro-GPT: Towards A Foundation Model For EEG. ISBI Wenhui Cui, Woojae Jeong, Philipp Thölke, Takfarinas Medani, Karim Jerbi, Anand A. Joshi, Richard M. Leahy
2023	J	`jnl`	Beta quantile regression for robust estimation of uncertainty in the presence of outliers. CoRR Haleh Akrami, Omar Zamzam, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy
2023	J	`jnl`	Brainstorm-DUNEuro: An integrated and user-friendly Finite Element Method for modeling electromagnetic brain activity. NeuroImage Takfarinas Medani, Juan Garcia-Prieto, François Tadel, Marios Antonakakis, Tim Erdbrügger, Malte Hoeltershinken, Wayne Mead, Sophie Schrader, Anand A. Joshi, Christian Engwer, Carsten H. Wolters, John C. Mosher, Richard M. Leahy
2023	J	`jnl`	Identification of overlapping and interacting networks reveals intrinsic spatiotemporal organization of the human brain. NeuroImage Jian Li, Yijun Liu, Jessica L. Wisnowski, Richard M. Leahy
2023	J	`jnl`	Learning A Disentangling Representation For PU Learning. CoRR Omar Zamzam, Haleh Akrami, Mahdi Soltanolkotabi, Richard M. Leahy
2023	Misc	`conf`	Learning From Positive and Unlabeled Data Using Observer-GAN. ICASSP Omar Zamzam, Haleh Akrami, Richard M. Leahy
2023	—	`ed.`	Medical Image Computing and Computer Assisted Intervention - MICCAI 2023 Workshops - MTSAIL 2023, LEAF 2023, AI4Treat 2023, MMMI 2023, REMIA 2023, Held in Conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8-12, 2023, Proceedings MTSAIL/LEAF/AI4Treat/MMMI/REMIA@MICCAI Jonghye Woo, Alessa Hering, Wilson Silva, Xiang Li, Huazhu Fu, Xiaofeng Liu, Fangxu Xing, Sanjay Purushotham, Tejas Sudharshan Mathai, Pritam Mukherjee, Max De Grauw, Regina Beets-Tan, Valentina Corbetta, Elmar Kotter, Mauricio Reyes, Christian F. Baumgartner, Quanzheng Li, Richard M. Leahy, Bin Dong, Hao Chen, Yuankai Huo, Jinglei Lv, Xinxing Xu, Xiaomeng Li, Dwarikanath Mahapatra, Li Cheng, Caroline Petitjean, Benoît Presles
2023	J	`jnl`	Meta Transfer of Self-Supervised Knowledge: Foundation Model in Action for Post-Traumatic Epilepsy Prediction. CoRR Wenhui Cui, Haleh Akrami, Ganning Zhao, Anand A. Joshi, Richard M. Leahy
2023	J	`jnl`	Neuro-GPT: Developing A Foundation Model for EEG. CoRR Wenhui Cui, Woojae Jeong, Philipp Thölke, Takfarinas Medani, Karim Jerbi, Anand A. Joshi, Richard M. Leahy
2023	J	`jnl`	Tuning Minimum-Norm regularization parameters for optimal MEG connectivity estimation. NeuroImage Elisabetta Vallarino, Ana-Sofía Hincapié Casas, Karim Jerbi, Richard M. Leahy, Annalisa Pascarella, Alberto Sorrentino, Sara Sommariva
2022	J	`jnl`	A robust variational autoencoder using beta divergence. Knowl. Based Syst. Haleh Akrami, Anand A. Joshi, Jian Li, Sergül Aydöre, Richard M. Leahy
2022	J	`jnl`	Learning From Positive and Unlabeled Data Using Observer-GAN. CoRR Omar Zamzam, Haleh Akrami, Richard M. Leahy
2022	J	`jnl`	Learning from imperfect training data using a robust loss function: application to brain image segmentation. CoRR Haleh Akrami, Wenhui Cui, Anand A. Joshi, Richard M. Leahy
2022	—	`ed.`	Multiscale Multimodal Medical Imaging - Third International Workshop, MMMI 2022, Held in Conjunction with MICCAI 2022, Singapore, September 22, 2022, Proceedings MMMI@MICCAI Xiang Li, Jinglei Lv, Yuankai Huo, Bin Dong, Richard M. Leahy, Quanzheng Li
2022	—	`conf`	PET Denoising and Uncertainty Estimation Based on NVAE Model Using Quantile Regression Loss. MICCAI (4) Jianan Cui, Yutong Xie, Anand A. Joshi, Kuang Gong, Kyung Sang Kim, Young-Don Son, Jong Hoon Kim, Richard M. Leahy, Huafeng Liu, Quanzheng Li
2022	J	`jnl`	Semi-supervised Learning using Robust Loss. CoRR Wenhui Cui, Haleh Akrami, Anand A. Joshi, Richard M. Leahy
2022	J	`jnl`	Toward Improved Generalization: Meta Transfer of Self-supervised Knowledge on Graphs. CoRR Wenhui Cui, Haleh Akrami, Anand A. Joshi, Richard M. Leahy
2021	B	`conf`	A pairwise approach for fMRI group studies using the BrainSync Transform. Image Processing Anand A. Joshi, Soyoung Choi, Jian Li, Haleh Akrami, Richard M. Leahy
2021	J	`jnl`	Autoregression and Structured Low-Rank Modeling of Sinogram Neighborhoods. IEEE Trans. Computational Imaging Rodrigo A. Lobos, Muhammad Usman Ghani, W. Clem Karl, Richard M. Leahy, Justin P. Haldar
2021	J	`jnl`	Deep Quantile Regression for Uncertainty Estimation in Unsupervised and Supervised Lesion Detection. CoRR Haleh Akrami, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy
2021	—	`ed.`	Multimodal Learning for Clinical Decision Support - 11th International Workshop, ML-CDS 2021, Held in Conjunction with MICCAI 2021, Strasbourg, France, October 1, 2021, Proceedings ML-CDS@MICCAI Tanveer F. Syeda-Mahmood, Xiang Li, Anant Madabhushi, Hayit Greenspan, Quanzheng Li, Richard M. Leahy, Bin Dong, Hongzhi Wang
2021	—	`conf`	Prediction of posttraumatic epilepsy using machine learning. Biomedical Applications in Molecular, Structural, and Functional Imaging Haleh Akrami, Andrei Irimia, Wenhui Cui, Anand A. Joshi, Richard M. Leahy
2021	—	`conf`	Quantile Regression for Uncertainty Estimation in VAEs with Applications to Brain Lesion Detection. IPMI Haleh Akrami, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy
2021	J	`jnl`	Robust brain network identification from multi-subject asynchronous fMRI data. NeuroImage Jian Li, Jessica L. Wisnowski, Anand A. Joshi, Richard M. Leahy
2020	—	`conf`	3D Phase Retrieval at Nano-Scale via Accelerated Wirtinger Flow. EUSIPCO Zalan Fabian, Justin P. Haldar, Richard M. Leahy, Mahdi Soltanolkotabi
2020	J	`jnl`	3D Phase Retrieval at Nano-Scale via Accelerated Wirtinger Flow. CoRR Zalan Fabian, Justin P. Haldar, Richard M. Leahy, Mahdi Soltanolkotabi
2020	—	`conf`	A Network-Based Approach to Study of Adhd Using Tensor Decomposition of Resting State Fmri Data. ISBI Jian Li, Anand A. Joshi, Richard M. Leahy
2020	J	`jnl`	Addressing Variance Shrinkage in Variational Autoencoders using Quantile Regression. CoRR Haleh Akrami, Anand A. Joshi, Sergül Aydöre, Richard M. Leahy
2020	—	`conf`	Autoregression and Structured Low-Rank Modeling of Sinograms. ISBI Rodrigo A. Lobos, Richard M. Leahy, Justin P. Haldar
2020	—	`conf`	Brain Lesion Detection Using A Robust Variational Autoencoder and Transfer Learning. ISBI Haleh Akrami, Anand A. Joshi, Jian Li, Sergül Aydöre, Richard M. Leahy
2020	—	`ed.`	Multiscale Multimodal Medical Imaging - First International Workshop, MMMI 2019, Held in Conjunction with MICCAI 2019, Shenzhen, China, October 13, 2019, Proceedings MMMI@MICCAI Quanzheng Li, Richard M. Leahy, Bin Dong, Xiang Li
2020	J	`jnl`	Realistic head modeling of electromagnetic brain activity: An integrated Brainstorm pipeline from MRI data to the FEM solution. CoRR Takfarinas Medani, Juan Garcia-Prieto, François Tadel, Sophie Schrader, Anand A. Joshi, Christian Engwer, Carsten H. Wolters, John C. Mosher, Richard M. Leahy
2020	J	`jnl`	Robust Variational Autoencoder for Tabular Data with Beta Divergence. CoRR Haleh Akrami, Sergül Aydöre, Richard M. Leahy, Anand A. Joshi
2020	J	`jnl`	Temporal non-local means filtering for studies of intrinsic brain connectivity from individual resting fMRI. Medical Image Anal. Jian Li, Soyoung Choi, Anand A. Joshi, Jessica L. Wisnowski, Richard M. Leahy
2020	J	`jnl`	fMRI-Kernel Regression: A Kernel-based Method for Pointwise Statistical Analysis of rs-fMRI for Population Studies. CoRR Anand A. Joshi, Soyoung Choi, Haleh Akrami, Richard M. Leahy
2019	—	`conf`	A Matched Filter Decomposition of fMRI into Resting and Task Components. MICCAI (3) Anand A. Joshi, Haleh Akrami, Jian Li, Richard M. Leahy
2019	B	`conf`	Brain network identification in asynchronous task fMRI data using robust and scalable tensor decomposition. Image Processing Jian Li, Jessica L. Wisnowski, Anand A. Joshi, Richard M. Leahy
2019	B	`conf`	Group-wise alignment of resting fMRI in space and time. Image Processing Haleh Akrami, Anand A. Joshi, Jian Li, Richard M. Leahy
2019	Misc	`conf`	Low-Rank Modeling of Local Sinogram Neighborhoods with Tomographic Applications. ACSSC Rodrigo A. Lobos, Richard M. Leahy, Justin P. Haldar
2019	B	`conf`	Predicting cognitive scores from resting fMRI data and geometric features of the brain. Image Processing Anand A. Joshi, Jian Li, Haleh Akrami, Richard M. Leahy
2019	J	`jnl`	Robust Variational Autoencoder. CoRR Haleh Akrami, Anand A. Joshi, Jian Li, Richard M. Leahy
2019	J	`jnl`	Scalable and Robust Tensor Decomposition of Spontaneous Stereotactic EEG Data. IEEE Trans. Biomed. Eng. Jian Li, Justin P. Haldar, John C. Mosher, Dileep R. Nair, Jorge A. Gonzalez-Martinez, Richard M. Leahy
2018	J	`jnl`	Are you thinking what I'm thinking? Synchronization of resting fMRI time-series across subjects. NeuroImage Anand A. Joshi, Minqi Chong, Jian Li, Soyoung Choi, Richard M. Leahy
2018	J	`jnl`	EEG for Current With Two-Dimensional Support. IEEE Trans. Biomed. Eng. George Dassios, Athanassios S. Fokas, Parham Hashemzadeh, Richard M. Leahy
2018	—	`conf`	Global PDF-based temporal non-local means filtering reveals individual differences in brain connectivity. ISBI Jian Li, Soyoung Choi, Anand A. Joshi, Jessica L. Wisnowski, Richard M. Leahy
2018	—	`conf`	Using the Anisotropic Laplace Equation to Compute Cortical Thickness. MICCAI (3) Anand A. Joshi, Chitresh Bhushan, Ronald Salloum, Jessica L. Wisnowski, David W. Shattuck, Richard M. Leahy
2018	—	`conf`	rfDemons: Resting fMRI-Based Cortical Surface Registration Using the BrainSync Transform. MICCAI (3) Anand A. Joshi, Jian Li, Minqi Chong, Haleh Akrami, Richard M. Leahy
2017	B	`conf`	A whole brain atlas with sub-parcellation of cortical gyri using resting fMRI. Image Processing Anand A. Joshi, Soyoung Choi, Gaurav Sonkar, Minqi Chong, Jorge Gonzalez-Martinez, Dileep Nair, David W. Shattuck, Hanna Damasio, Richard M. Leahy
2017	B	`conf`	An algorithm for automatic parameter adjustment for brain extraction in BrainSuite. Image Processing Gautham Rajagopal, Anand A. Joshi, Richard M. Leahy
2017	—	`conf`	BrainSync: An Orthogonal Transformation for Synchronization of fMRI Data Across Subjects. MICCAI (1) Anand A. Joshi, Minqi Chong, Richard M. Leahy
2017	J	`jnl`	Individual parcellation of resting fMRI with a group functional connectivity prior. NeuroImage Minqi Chong, Chitresh Bhushan, Anand A. Joshi, Soyoung Choi, Justin P. Haldar, David W. Shattuck, R. Nathan Spreng, Richard M. Leahy
2017	—	`conf`	Kernel Methods for Riemannian Analysis of Robust Descriptors of the Cerebral Cortex. IPMI Suyash P. Awate, Richard M. Leahy, Anand A. Joshi
2017	—	`conf`	Parameter selection for optimized non-local means filtering of task fMRI. ISBI Jian Li, Richard M. Leahy
2017	Misc	`conf`	Robust tensor decomposition of resting brain networks in stereotactic EEG. ACSSC Jian Li, John C. Mosher, Dileep R. Nair, Jorge Gonzalez-Martinez, Richard M. Leahy
2016	Misc	`conf`	Multi-kernel based nonlinear models for connectivity identification of brain networks. ICASSP G. V. Karanikolas, Georgios B. Giannakis, Konstantinos Slavakis, Richard M. Leahy
2016	J	`jnl`	Registration-Based Morphometry for Shape Analysis of the Bones of the Human Wrist. IEEE Trans. Medical Imaging Anand A. Joshi, Richard M. Leahy, Ramsey Derek Badawi, Abhijit J. Chaudhari
2016	—	`conf`	Riemannian Statistical Analysis of Cortical Geometry with Robustness to Partial Homology and Misalignment. MICCAI (1) Suyash P. Awate, Richard M. Leahy, Anand A. Joshi
2015	J	`jnl`	Co-registration and distortion correction of diffusion and anatomical images based on inverse contrast normalization. NeuroImage Chitresh Bhushan, Justin P. Haldar, Soyoung Choi, Anand A. Joshi, David W. Shattuck, Richard M. Leahy
2015	—	`conf`	Correcting inhomogeneity-induced distortion in FMRI using non-rigid registration. ISBI Micah C. Chambers, Chitresh Bhushan, Justin P. Haldar, Richard M. Leahy, David W. Shattuck
2015	—	`conf`	Direct estimation from list-mode data for reversible tracers using graphical modeling. ISBI Wentao Zhu, Ning Guo, Bing Bai, Peter S. Conti, Richard M. Leahy, Quanzheng Li
2015	—	`conf`	Measuring Asymmetric Interactions in Resting State Brain Networks. IPMI Anand A. Joshi, Ronald Salloum, Chitresh Bhushan, Richard M. Leahy
2014	J	`jnl`	Patlak Image Estimation From Dual Time-Point List-Mode PET Data. IEEE Trans. Medical Imaging Wentao Zhu, Quanzheng Li, Bing Bai, Peter S. Conti, Richard M. Leahy
2014	J	`jnl`	Sparsity Constrained Mixture Modeling for the Estimation of Kinetic Parameters in Dynamic PET. IEEE Trans. Medical Imaging Yanguang Lin, Justin P. Haldar, Quanzheng Li, Peter S. Conti, Richard M. Leahy
2014	J	`jnl`	To cut or not to cut? Assessing the modular structure of brain networks. NeuroImage Yu-Teng Chang, Dimitrios Pantazis, Richard M. Leahy
2013	Misc	`conf`	A measure of connectivity in the presence of crosstalk. ACSSC Sergül Aydöre, Syed Ashrafulla, Anand A. Joshi, Richard M. Leahy
2013	J	`jnl`	A note on the phase locking value and its properties. NeuroImage Sergül Aydöre, Dimitrios Pantazis, Richard M. Leahy
2013	J	`jnl`	Canonical granger causality between regions of interest. NeuroImage Syed Ashrafulla, Justin P. Haldar, Anand A. Joshi, Richard M. Leahy
2013	Misc	`conf`	Causality in variance in electrophysiological data using the ARCH model. ACSSC Syed Ashrafulla, Justin P. Haldar, John C. Mosher, Richard M. Leahy
2013	J	`jnl`	Linear transforms for Fourier data on the sphere: Application to high angular resolution diffusion MRI of the brain. NeuroImage Justin P. Haldar, Richard M. Leahy
2013	—	`conf`	Morphometry for early monitoring of treatment response in rheumatoid arthritis. ISBI Anand A. Joshi, Richard M. Leahy, Ramsey Derek Badawi, Abhijit J. Chaudhari
2013	—	`conf`	Parametric distributions for assessing significance in modular partitions of brain networks. ISBI Yu-Teng Chang, Richard M. Leahy, Dimitrios Pantazis
2013	—	`conf`	The equivalence of linear spherical deconvolution and model-free linear transform methods for diffusion MRI. ISBI Justin P. Haldar, Richard M. Leahy
2012	—	`conf`	A Method for Automated Cortical Surface Registration and Labeling. WBIR Anand A. Joshi, David W. Shattuck, Richard M. Leahy
2012	—	`conf`	An Invariant Shape Representation Using the Anisotropic Helmholtz Equation. MICCAI (3) Anand A. Joshi, Syed Ashrafulla, David W. Shattuck, Hanna Damasio, Richard M. Leahy
2012	—	`conf`	Assessing statistical significance when partitioning large-scale brain networks. ISBI Yu-Teng Chang, Dimitrios Pantazis, Richard M. Leahy
2012	—	`conf`	Canonical Granger causality applied to functional brain data. ISBI Syed Ashrafulla, Justin P. Haldar, Anand A. Joshi, Richard M. Leahy
2012	—	`conf`	Constrained mixture modeling for the estimation of kinetic parameters in dynamic PET. ISBI Yanguang Lin, Quanzheng Li, Justin P. Haldar, Richard M. Leahy
2012	—	`conf`	Correcting susceptibility-induced distortion in diffusion-weighted MRI using constrained nonrigid registration. APSIPA Chitresh Bhushan, Justin P. Haldar, Anand A. Joshi, Richard M. Leahy
2012	—	`conf`	Dual-time-point Patlak estimation from list mode PET data. ISBI Wentao Zhu, Quanzheng Li, Richard M. Leahy
2012	—	`conf`	Geodesic curvature flow on surfaces for automatic sulcal delineation. ISBI Anand A. Joshi, David W. Shattuck, Hanna Damasio, Richard M. Leahy
2012	—	`conf`	New linear transforms for data on a Fourier 2-sphere with application to diffusion MRI. ISBI Justin P. Haldar, Richard M. Leahy
2012	—	`conf`	Non-rigid Image Registration Using Gaussian Mixture Models. WBIR Sangeetha Somayajula, Anand A. Joshi, Richard M. Leahy
2012	—	`conf`	Of the largest eigenvalue for modularity-based partitioning. SSP Yu-Teng Chang, Dimitrios Pantazis, Richard M. Leahy
2012	—	`conf`	Phase synchrony in multivariate Gaussian data with applications to cortical networks. ISBI Sergül Aydöre, Dimitrios Pantazis, Richard M. Leahy
2012	—	`conf`	Robust identification of partial-correlation based networks with applications to cortical thickness data. ISBI David Wheland, Anand A. Joshi, Katie McMahon, Narelle K. Hansell, Nicholas G. Martin, Margaret J. Wright, Paul M. Thompson, David W. Shattuck, Richard M. Leahy
2011	J	`jnl`	Brainstorm: A User-Friendly Application for MEG/EEG Analysis. Comput. Intell. Neurosci. François Tadel, Sylvain Baillet, John C. Mosher, Dimitrios Pantazis, Richard M. Leahy
2011	J	`jnl`	Optimal Rebinning of Time-of-Flight PET Data. IEEE Trans. Medical Imaging Sangtae Ahn, Sanghee Cho, Quanzheng Li, Yanguang Lin, Richard M. Leahy
2011	J	`jnl`	PET Image Reconstruction Using Information Theoretic Anatomical Priors. IEEE Trans. Medical Imaging Sangeetha Somayajula, Christos Panagiotou, Anand Rangarajan, Quanzheng Li, Simon R. Arridge, Richard M. Leahy
2011	—	`conf`	Partitioning directed graphs based on modularity and information flow. ISBI Yu-Teng Chang, Dimitrios Pantazis, Richard M. Leahy
2011	—	`conf`	Structural analysis of the cerebral cortex using blind source separation. ISBI David Wheland, Dimitrios Pantazis, Richard M. Leahy
2010	B	`conf`	A new combined surface and volume registration. Image Processing Natasha Leporé, Anand A. Joshi, Richard M. Leahy, Caroline C. Brun, Yi-Yu Chou, Xavier Pennec, Agatha D. Lee, Marina Barysheva, Greig I. de Zubicaray, Margaret J. Wright, Katie L. McMahon, Arthur W. Toga, Paul M. Thompson
2010	—	`conf`	Anatomical structural network analysis of human brain using partial correlations of gray matter volumes. ISBI Anand A. Joshi, Shantanu H. Joshi, Ivo D. Dinov, David W. Shattuck, Richard M. Leahy, Arthur W. Toga
2010	—	`conf`	Canonical correlation analysis applied to functional connectivity in MEG. ISBI Juan L. P. Soto, Dimitrios Pantazis, Karim Jerbi, Sylvain Bailler, Richard M. Leahy
2010	J	`jnl`	Comparison of landmark-based and automatic methods for cortical surface registration. NeuroImage Dimitrios Pantazis, Anand A. Joshi, Jintao Jiang, David W. Shattuck, Lynne E. Bernstein, Hanna Damasio, Richard M. Leahy
2010	J	`jnl`	Identifying true cortical interactions in MEG using the nulling beamformer. NeuroImage Hua Brian Hui, Dimitrios Pantazis, Steven L. Bressler, Richard M. Leahy
2010	—	`conf`	Statistically optimal graph partition method based on modularity. ISBI Yu-Teng Chang, Dimitrios Pantazis, Hua Brian Hui, Richard M. Leahy
2010	J	`jnl`	Sulcal set optimization for cortical surface registration. NeuroImage Anand A. Joshi, Dimitrios Pantazis, Quanzheng Li, Hanna Damasio, David W. Shattuck, Arthur W. Toga, Richard M. Leahy
2009	—	`conf`	A Framework for Brain Registration via Simultaneous Surface and Volume Flow. IPMI Anand A. Joshi, Richard M. Leahy, Arthur W. Toga, David W. Shattuck
2009	J	`jnl`	A Parameterization-Based Numerical Method for Isotropic and Anisotropic Diffusion Smoothing on Non-Flat Surfaces. IEEE Trans. Image Process. Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy
2009	J	`jnl`	A novel ANCOVA design for analysis of MEG data with application to a visual attention study. NeuroImage Dimitrios Pantazis, Gregory V. Simpson, Darren L. Weber, Corby L. Dale, Thomas E. Nichols, Richard M. Leahy
2009	J	`jnl`	Controlling Familywise Error Rate for Matched Subspace Detection in Dynamic FDG PET. IEEE Trans. Medical Imaging Zheng Li, Quanzheng Li, Dimitrios Pantazis, Xiaoli Yu, Peter S. Conti, Richard M. Leahy
2009	—	`conf`	Diffusion Optical Tomography Using Entropic Priors. ISBI Christos Panagiotou, Sangeetha Somayajula, Adam P. Gibson, Martin Schweiger, Richard M. Leahy, Simon R. Arridge
2009	—	`conf`	Direct Estimation of Patlak Parameters from List Mode PET Data. ISBI Quanzheng Li, Richard M. Leahy
2009	J	`jnl`	Directed Mammalian Gene Regulatory Networks Using Expression and Comparative Genomic Hybridization Microarray Data from Radiation Hybrids. PLoS Comput. Biol. Sangtae Ahn, Richard T. Wang, Christopher C. Park, Andy Lin, Richard M. Leahy, Kenneth Lange, Desmond J. Smith
2009	—	`conf`	Generalized Sidelobe Canceller for Magnetoencephalography Arrays. ISBI John C. Mosher, Matti Hämäläinen, Dimitrios Pantazis, Hua Brian Hui, Richard C. Burgess, Richard M. Leahy
2009	J	`jnl`	Lesion Detection in Dynamic FDG-PET Using Matched Subspace Detection. IEEE Trans. Medical Imaging Zheng Li, Quanzheng Li, Xiaoli Yu, Peter S. Conti, Richard M. Leahy
2009	—	`conf`	Optimal Illumination Patterns for Fluorescence Tomography. ISBI Joyita Dutta, Sangtae Ahn, Anand A. Joshi, Richard M. Leahy
2009	A*	`conf`	Optimization of landmark selection for cortical surface registration. CVPR Anand A. Joshi, David W. Shattuck, Dimitrios Pantazis, Quanzheng Li, Hanna Damasio, Richard M. Leahy
2009	—	`conf`	Posture Matching and Elastic Registration of a Mouse Atlas to Surface Topography Range Data. ISBI Anand A. Joshi, Abhijit J. Chaudhari, Changqing Li, David W. Shattuck, Joyita Dutta, Richard M. Leahy, Arthur W. Toga
2008	—	`conf`	A two-step imaging procedure for MEG characterization of cortical currents: Location and spatial extent. ISBI Sheraz Khan, Benoit Cottereau, Richard M. Leahy, John C. Mosher, Habib Ammari, Sylvain Baillet
2008	J	`jnl`	Analysis of Resolution and Noise Properties of Nonquadratically Regularized Image Reconstruction Methods for PET. IEEE Trans. Medical Imaging Sangtae Ahn, Richard M. Leahy
2008	—	`conf`	Mutual information based non-rigidmouse registration using a scale-space approach. ISBI Sangeetha Somayajula, Anand A. Joshi, Richard M. Leahy
2007	J	`jnl`	A Fast Fully 4-D Incremental Gradient Reconstruction Algorithm for List Mode PET Data. IEEE Trans. Medical Imaging Quanzheng Li, Evren Asma, Sangtae Ahn, Richard M. Leahy
2007	—	`conf`	A Finite Element Method for Elastic Parameterization and Alignment of Cortical Surfaces Using Sulcal Constraints. ISBI Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy
2007	—	`conf`	Brain Image Registration Using Cortically Constrained Harmonic Mappings. IPMI Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy
2007	—	`conf`	Exploring Human Visual Attention in an Meg Study of a Spatial Cueing Paradigm Using a Novel Ancova Design. ISBI Dimitrios Pantazis, Gregory V. Simpson, Darren L. Weber, Corby L. Dale, Thomas E. Nichols, Richard M. Leahy
2007	—	`conf`	Fast Image Reconstruction Methods for Fully 3d Multispectral Optical Bioluminescence Tomography. ISBI Sangtae Ahn, Abhijit J. Chaudhari, Felix Darvas, Charles A. Bouman, Richard M. Leahy
2007	—	`conf`	Generalized Surface Flows for Deformable Registration and Cortical Matching. MICCAI (1) Ilya Eckstein, Anand A. Joshi, C.-C. Jay Kuo, Richard M. Leahy, Mathieu Desbrun
2007	J	`jnl`	Iterative Image Reconstruction Using Inverse Fourier Rebinning for Fully 3-D PET. IEEE Trans. Medical Imaging Sanghee Cho, Quanzheng Li, Sangtae Ahn, Bing Bai, Richard M. Leahy
2007	—	`conf`	Pet Image Reconstruction Using Anatomical Information Through Mutual Information Based Priors: A Scale Space Approach. ISBI Sangeetha Somayajula, Anand Rangarajan, Richard M. Leahy
2007	—	`conf`	Simultaneous surface and volumetric registration using harmonic maps. Computational Imaging Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy
2007	J	`jnl`	Surface-Constrained Volumetric Brain Registration Using Harmonic Mappings. IEEE Trans. Medical Imaging Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy
2007	—	`conf`	Variance Approximation for Exponential Family Penalized Maximum Likelihood Estimators: Application fo Kinetic Parametric Estimation. ISBI Quanzheng Li, Richard M. Leahy
2006	—	`conf`	Linearly constrained MEG beamformers for MVAR modeling of cortical interactions. ISBI Hua Brian Hui, Richard M. Leahy
2006	—	`conf`	Matched subspace detection for dynamic PET: an ROC phantom study for MAP reconstruction. ISBI Zheng Li, Quanzheng Li, Xiaoli Yu, Peter S. Conti, Richard M. Leahy
2006	J	`jnl`	Mean and covariance properties of dynamic PET reconstructions from list-mode data. IEEE Trans. Medical Imaging Evren Asma, Richard M. Leahy
2006	—	`conf`	Spatial resolution properties of nonquadratically regularized image reconstruction for PET. ISBI Sangtae Ahn, Richard M. Leahy
2006	J	`jnl`	Statistical Modeling and Reconstruction of Randoms Precorrected PET Data. IEEE Trans. Medical Imaging Quanzheng Li, Richard M. Leahy
2006	—	`conf`	Statistical modeling and reconstruction of randoms pre-corrected PET data. ISBI Quanzheng Li, Richard M. Leahy
2006	J	`jnl`	Task-based comparison of inverse methods in magnetoencephalography. IEEE Trans. Biomed. Eng. Esen Küçükaltun-Yildirim, Dimitrios Pantazis, Richard M. Leahy
2005	—	`conf`	A Framework for Registration, Statistical Characterization and Classification of Cortically Constrained Functional Imaging Data. IPMI Anand A. Joshi, David W. Shattuck, Paul M. Thompson, Richard M. Leahy
2005	J	`jnl`	A comparison of random field theory and permutation methods for the statistical analysis of MEG data. NeuroImage Dimitrios Pantazis, Thomas E. Nichols, Sylvain Baillet, Richard M. Leahy
2005	—	`conf`	Imaging of oscillatory behavior in event-related MEG studies. Computational Imaging Dimitrios Pantazis, Darren L. Weber, Corby L. Dale, Thomas E. Nichols, Gregory V. Simpson, Richard M. Leahy
2005	J	`jnl`	Investigations of dipole localization accuracy in MEG using the bootstrap. NeuroImage Felix Darvas, M. Rautiainen, Dimitrios Pantazis, Sylvain Baillet, Habib Benali, John C. Mosher, Line Garnero, Richard M. Leahy
2004	—	`conf`	A Fast Fully 4D Incremental Gradient Reconstruction Algorithm for List Mode PET Data. ISBI Quanzheng Li, Evren Asma, Richard M. Leahy
2004	J	`jnl`	Accurate estimation of the fisher information matrix for the PET image reconstruction problem. IEEE Trans. Medical Imaging Quanzheng Li, Evren Asma, Jinyi Qi, James R. Bading, Richard M. Leahy
2004	—	`conf`	Cortical Surface Parameterization by P-Harmonic Energy Minimization. ISBI Anand A. Joshi, Richard M. Leahy, Paul M. Thompson, David W. Shattuck
2004	—	`conf`	Electromagnetic Brain Mapping using BrainStorm. ISBI Sylvain Baillet, John C. Mosher, Richard M. Leahy
2004	J	`jnl`	Localization of realistic cortical activity in MEG using current multipoles. NeuroImage Karim Jerbi, Sylvain Baillet, John C. Mosher, G. Nolte, Line Garnero, Richard M. Leahy
2004	—	`conf`	Statistical Surface-Based Morphometry Using a Non-Parametric Approach. ISBI Dimitrios Pantazis, Richard M. Leahy, Thomas E. Nichols, Martin Styner
2003	—	`conf`	Spatiotemporal Localization of Significant Activation in MEG Using Permutation Tests. IPMI Dimitrios Pantazis, Thomas E. Nichols, Sylvain Baillet, Richard M. Leahy
2002	—	`conf`	Automated interictal spike detection and source localization in MEG using ICA and spatial-temporal clustering. ISBI Alexei Ossadtchi, Richard M. Leahy, John C. Mosher, Nancy Lopez, William Sutherling
2002	J	`jnl`	BrainSuite: An automated cortical surface identification tool. Medical Image Anal. David W. Shattuck, Richard M. Leahy
2002	J	`jnl`	Editorial. IEEE Trans. Medical Imaging Richard M. Leahy, Michael F. Insana
2002	—	`conf`	Multi-modality tomographic image reconstruction using mesh modeling. ISBI Jovan G. Brankov, Yongyi Yang, Richard M. Leahy, Miles N. Wernick
2002	B	`conf`	Segmentation of the skull in 3D human MR images using mathematical morphology. Image Processing Belma Dogdas, David W. Shattuck, Richard M. Leahy
2002	J	`jnl`	Spatiotemporal reconstruction of list mode PET data. IEEE Trans. Medical Imaging Thomas E. Nichols, Jinyi Qi, Evren Asma, Richard M. Leahy
2001	J	`jnl`	Automated Graph Based Analysis and Correction of Cortical Volume Topology. IEEE Trans. Medical Imaging David W. Shattuck, Richard M. Leahy
2001	J	`jnl`	Electromagnetic brain mapping. IEEE Signal Process. Mag. Sylvain Baillet, John C. Mosher, Richard M. Leahy
2001	—	`ed.`	Information Processing in Medical Imaging, 17th International Conference, IPMI 2001, Davis, CA, USA, June 18-22, 2001, Proceedings IPMI Michael F. Insana, Richard M. Leahy
2000	A	`conf`	BrainSuite: An Automated Cortical Surface Identification Tool. MICCAI David W. Shattuck, Richard M. Leahy
2000	J	`jnl`	Comparison of 3D maximum a posteriori and filtered backprojection algorithms for high resolution animal imaging with microPET. IEEE Trans. Medical Imaging Arion Chatziioannou, Jinyi Qi, A. Moore, Alex Annala, K. Nguyen, Richard M. Leahy, Simon R. Cherry
2000	J	`jnl`	Guest Editorial Recent Developments in Iterative Image Reconstruction for PET and SPECT. IEEE Trans. Medical Imaging Richard M. Leahy, Charles L. Byrne
2000	B	`conf`	Optimization method for creating semi-isometric flat maps of the cerebral cortex. Image Processing Bijan Timsari, Richard M. Leahy
2000	J	`jnl`	Paired MEG data set source localization using recursively applied and projected (RAP) MUSIC. IEEE Trans. Biomed. Eng. John J. Ermer, John C. Mosher, Mingxiong Huang, Richard M. Leahy
2000	J	`jnl`	Resolution and noise properties of MAP reconstruction for fully 3D PET. IEEE Trans. Medical Imaging Jinyi Qi, Richard M. Leahy
2000	J	`jnl`	Statistical approaches in quantitative positron emission tomography. Stat. Comput. Richard M. Leahy, Jinyi Qi
2000	B	`conf`	Topologically constrained cortical surfaces from MRI. Image Processing David W. Shattuck, Richard M. Leahy
1999	J	`jnl`	A theoretical study of the contrast recovery and variance of MAP reconstructions from PET data. IEEE Trans. Medical Imaging Jinyi Qi, Richard M. Leahy
1999	—	`conf`	Continuous Time Dynamic PET Imaging Using List Mode Data. IPMI Thomas E. Nichols, Jinyi Qi, Richard M. Leahy
1999	J	`jnl`	EEG and MEG: forward solutions for inverse methods. IEEE Trans. Biomed. Eng. John C. Mosher, Richard M. Leahy, Paul S. Lewis
1999	B	`conf`	Fast computation of the covariance of MAP reconstructions of PET images. Image Processing Jinyi Qi, Richard M. Leahy
1999	—	`conf`	MEG Source Imaging Using Multipolar Expansions. IPMI John C. Mosher, Richard M. Leahy, David W. Shattuck, Sylvain Baillet
1999	J	`jnl`	Source localization using recursively applied and projected (RAP) MUSIC. IEEE Trans. Signal Process. John C. Mosher, Richard M. Leahy
1999	B	`conf`	Topological refinement of volumetric data. Image Processing David W. Shattuck, Richard M. Leahy
1998	J	`jnl`	Recursive MUSIC: A framework for EEG and MEG source localization. IEEE Trans. Biomed. Eng. John C. Mosher, Richard M. Leahy
1997	J	`jnl`	Approximate maximum likelihood hyperparameter estimation for Gibbs priors. IEEE Trans. Image Process. Zhenyu Zhou, Richard M. Leahy, Jinyi Qi
1997	J	`jnl`	MEG-Based Imaging of Focal Neuronal Current Sources. IEEE Trans. Medical Imaging J. W. Phillips, Richard M. Leahy, John C. Mosher
1997	J	`jnl`	Surface-Based Labeling of Cortical Anatomy Using a Deformable Atlas. IEEE Trans. Medical Imaging Stephanie Sandor, Richard M. Leahy
1995	Misc	`conf`	Adaptive filtering of stable processes for active attenuation of impulsive noise. ICASSP Richard M. Leahy, Zhenyu Zhou, Yung-Chih Hsu
1995	B	`conf`	Approximate maximum likelihood hyperparameter estimation for Gibbs priors. ICIP Zhenyu Zhou, Richard M. Leahy
1995	Misc	`conf`	Matrix kernels for MEG and EEG source localization and imaging. ICASSP John C. Mosher, Richard M. Leahy, Paul S. Lewis
1995	Misc	`conf`	Neuromagnetic source reconstruction. ICASSP Paul S. Lewis, John C. Mosher, Richard M. Leahy
1994	J	`jnl`	Determining cardiac velocity fields and intraventricular pressure distribution from a sequence of ultrafast CT cardiac images. IEEE Trans. Medical Imaging Samuel Moon-Ho Song, Richard M. Leahy, Douglas P. Boyd, Bruce H. Brundage, Sandy Napel
1994	J	`jnl`	Fast gradient-based methods for Bayesian reconstruction of transmission and emission PET images. IEEE Trans. Medical Imaging Erkan U. Mumcuoglu, Richard M. Leahy, Simon R. Cherry, Zhenyu Zhou
1994	—	`conf`	Matching Deformable Atlas Models to Preprocessed Magnetic Resonance Brain Images. ICIP (3) Stephanie Sandor, Richard M. Leahy
1993	J	`jnl`	An Optimal Graph Theoretic Approach to Data Clustering: Theory and Its Application to Image Segmentation. IEEE Trans. Pattern Anal. Mach. Intell. Zhenyu Wu, Richard M. Leahy
1993	J	`jnl`	An approximate method of evaluating the joint likelihood for first-order GMRFs. IEEE Trans. Image Process. Zhenyu Wu, Richard M. Leahy
1993	—	`conf`	Biomagnetic localization from transient quasi-static events. ICASSP (1) John C. Mosher, Richard M. Leahy, Paul S. Lewis
1992	A*	`conf`	Image segmentation via edge contour finding: a graph theoretic approach. CVPR Zhenyu Wu, Richard M. Leahy
1992	J	`jnl`	Multiple dipole modeling and localization from spatio-temporal MEG data. IEEE Trans. Biomed. Eng. John C. Mosher, Paul S. Lewis, Richard M. Leahy
1992	J	`jnl`	Statistic-based MAP image-reconstruction from Poisson data using Gibbs priors. IEEE Trans. Signal Process. Thomas J. Hebert, Richard M. Leahy
1991	—	`conf`	Incorporation of Anatomical MR Data for Improved Dunctional Imaging with PET. IPMI Richard M. Leahy, X. Yan
1991	Misc	`conf`	MAP restoration of blurred, photon-limited images via an expectation maximization algorithm. ICASSP Thomas J. Hebert, Richard M. Leahy
1990	Misc	`conf`	A new unsupervised hierarchical segmentation algorithm for textured images. ICASSP Zhenyu Wu, Richard M. Leahy
1990	B	`conf`	Multispectral tissue classification of MR images using sensor fusion approaches. Image Processing Rae H. Lee, Richard M. Leahy
1988	Misc	`conf`	A nonlinear simplex algorithm for minimum order solutions. ICASSP Richard M. Leahy, Brian Jeffs, Zhenyu Wu
1987	J	`jnl`	An Evaluation of Methods for Neuromagnetic Image Reconstruction. IEEE Trans. Biomed. Eng. Brian Jeffs, Richard M. Leahy, Manbir Singh
1986	J	`jnl`	An optimal technique for constraint-based image restoration and reconstruction. IEEE Trans. Acoust. Speech Signal Process. Richard M. Leahy, Constantinos E. Goutis
1985	Misc	`conf`	Optimal techniques for constraint based signal restoration and image reconstruction. ICASSP Richard M. Leahy, Costas E. Goutis
1984	Misc	`conf`	Spectra using data distribution and covariance modelling. ICASSP Costas E. Goutis, Richard M. Leahy, P. G. Cassidy
1984	Misc	`conf`	Tomographic and spectral analysis using noise statistics. ICASSP Richard M. Leahy, Constantinos E. Goutis, S. Drossos
1983	Misc	`conf`	Reconstruction algorithms for limited view projection data. ICASSP Constantinos E. Goutis, Richard M. Leahy, S. Drossos