Richard J. Edwards

16 papers Journal 13Unranked 2
YearRankTypeTitle / Venue / Authors
2019 J jnl
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.
Briefings Bioinform.
Maria Victoria Schneider, Philippa C. Griffin, Sonika Tyagi, Madison Flannery, Saravanan Dayalan, Simon Gladman, Nathan S. Watson-Haigh, Philipp E. Bayer, Michael A. Charleston, Ira Cooke, Rob Cook, Richard J. Edwards, David Edwards, Dominique Gorse, Malcolm J. McConville, David Powell, Marc R. Wilkins, Andrew Lonie
2019 — ch.
Phylogenetic Tree Rooting.
Encyclopedia of Bioinformatics and Computational Biology (2)
Richard J. Edwards
2015 J jnl
QSLiMFinder: improved short linear motif prediction using specific query protein data.
Bioinform.
Nicolas Palopoli, Kieren T. Lythgow, Richard J. Edwards
2015 J jnl
SLiMScape 3.x: a Cytoscape 3 app for discovery of Short Linear Motifs in protein interaction networks.
F1000Research
Emily Olorin, Kevin T. O'Brien, Nicolas Palopoli, Åsa Pérez-Bercoff, Denis C. Shields, Richard J. Edwards
2012 J jnl
ELM - the database of eukaryotic linear motifs.
Nucleic Acids Res.
Holger Dinkel, Sushama Michael, Robert J. Weatheritt, Norman E. Davey, Kim Van Roey, Brigitte Altenberg, Grischa Toedt, Bora Uyar, Markus Seiler, Aidan Budd, Lisa Jödicke, Marcel A. Dammert, Christian Schroeter, Maria Hammer, Tobias Schmidt, Peter Jehl, Caroline McGuigan, Magdalena Dymecka, Claudia Chica, Katja Luck, Allegra Via, Andrew Chatr-aryamontri, Niall J. Haslam, Gleb Grebnev, Richard J. Edwards, Michel O. Steinmetz, Heike Meiselbach, Francesca Diella, Toby J. Gibson
2011 J jnl
SLiMSearch 2.0: biological context for short linear motifs in proteins.
Nucleic Acids Res.
Norman E. Davey, Niall J. Haslam, Denis C. Shields, Richard J. Edwards
2010 J jnl
Estimation and efficient computation of the true probability of recurrence of short linear protein sequence motifs in unrelated proteins.
BMC Bioinform.
Norman E. Davey, Richard J. Edwards, Denis C. Shields
2010 J jnl
SLiMFinder: a web server to find novel, significantly over-represented, short protein motifs.
Nucleic Acids Res.
Norman E. Davey, Niall J. Haslam, Denis C. Shields, Richard J. Edwards
2010 — conf
SLiMSearch: A Webserver for Finding Novel Occurrences of Short Linear Motifs in Proteins, Incorporating Sequence Context.
PRIB
Norman E. Davey, Niall J. Haslam, Denis C. Shields, Richard J. Edwards
2009 J jnl
Masking residues using context-specific evolutionary conservation significantly improves short linear motif discovery.
Bioinform.
Norman E. Davey, Denis C. Shields, Richard J. Edwards
2008 J jnl
CompariMotif: quick and easy comparisons of sequence motifs.
Bioinform.
Richard J. Edwards, Norman E. Davey, Denis C. Shields
2007 J jnl
The SLiMDisc server: short, linear motif discovery in proteins.
Nucleic Acids Res.
Norman E. Davey, Richard J. Edwards, Denis C. Shields
2006 J jnl
Absolute Net Charge and the Biological Activity of Oligopeptides.
J. Chem. Inf. Model.
Laavanya Parthasarathi, Marc Devocelle, Chresten R. Søndergaard, Ivan Baran, Colm O'Dushlaine, Norman E. Davey, Richard J. Edwards, Niamh Moran, Dermot Kenny, Denis C. Shields
2005 J jnl
BADASP: predicting functional specificity in protein families using ancestral sequences.
Bioinform.
Richard J. Edwards, Denis C. Shields
2004 J jnl
GASP: Gapped Ancestral Sequence Prediction for proteins.
BMC Bioinform.
Richard J. Edwards, Denis C. Shields
2004 — conf
Investigating the 3D Conformation of N-Terminally Constrained Oligopeptides.
Spanish Bioinformatics Conference
Itizar Frades, Richard J. Edwards, Denis C. Shields