Riccardo Colombo

22 papers B 1Journal 12Unranked 8
YearRankTypeTitle / Venue / Authors
2023 J jnl
Cardiorespiratory coupling in mechanically ventilated patients studied via synchrogram analysis.
Medical Biol. Eng. Comput.
Davide Ottolina, Beatrice Cairo, Tommaso Fossali, Claudio Mazzucco, Antonio Castelli, Roberto Rech, Emanuele Catena, Alberto Porta, Riccardo Colombo
2022 — conf
Derangement of Cardiovascular Regulatory Mechanisms in COVID-19 Patients in Intensive Care Unit and its Association with Mortality.
CinC
Francesca Gelpi, Vlasta Bari, Beatrice Cairo, Beatrice De Maria, Noemi Cornara, Riccardo Colombo, Alberto Porta
2020 J jnl
The Influence of Nutrients Diffusion on a Metabolism-driven Model of a Multi-cellular System.
Fundam. Informaticae
Davide Maspero, Chiara Damiani, Marco Antoniotti, Alex Graudenzi, Marzia Di Filippo, Marco Vanoni, Giulio Caravagna, Riccardo Colombo, Daniele Ramazzotti, Dario Pescini
2019 J jnl
Integration of single-cell RNA-seq data into population models to characterize cancer metabolism.
PLoS Comput. Biol.
Chiara Damiani, Davide Maspero, Marzia Di Filippo, Riccardo Colombo, Dario Pescini, Alex Graudenzi, Hans V. Westerhoff, Lilia Alberghina, Marco Vanoni, Giancarlo Mauri
2018 J jnl
Emerging ensembles of kinetic parameters to characterize observed metabolic phenotypes.
BMC Bioinform.
Riccardo Colombo, Chiara Damiani, David R. Gilbert, Monika Heiner, Giancarlo Mauri, Dario Pescini
2018 J jnl
Fuzzy Self-Tuning PSO: A settings-free algorithm for global optimization.
Swarm Evol. Comput.
Marco S. Nobile, Paolo Cazzaniga, Daniela Besozzi, Riccardo Colombo, Giancarlo Mauri, Gabriella Pasi
2017 J jnl
A metabolic core model elucidates how enhanced utilization of glucose and glutamine, with enhanced glutamine-dependent lactate production, promotes cancer cell growth: The WarburQ effect.
PLoS Comput. Biol.
Chiara Damiani, Riccardo Colombo, Daniela Gaglio, Fabrizia Mastroianni, Dario Pescini, Hans V. Westerhoff, Giancarlo Mauri, Marco Vanoni, Lilia Alberghina
2017 — conf
Poster: On the effects of cooperative platooning on traffic shock waves.
VNC
Luca Terruzzi, Riccardo Colombo, Michele Segata
2017 J jnl
Quantifying Net Synergy/Redundancy of Spontaneous Variability Regulation via Predictability and Transfer Entropy Decomposition Frameworks.
IEEE Trans. Biomed. Eng.
Alberto Porta, Vlasta Bari, Beatrice De Maria, Anielle C. M. Takahashi, Stefano Guzzetti, Riccardo Colombo, Aparecida Maria Catai, Ferdinando Raimondi, Luca Faes
2017 J jnl
popFBA: tackling intratumour heterogeneity with Flux Balance Analysis.
Bioinform.
Chiara Damiani, Marzia Di Filippo, Dario Pescini, Davide Maspero, Riccardo Colombo, Giancarlo Mauri
2016 — conf
COSYS: A Computational Infrastructure for Systems Biology.
CIBB
Fabio Cumbo, Marco S. Nobile, Chiara Damiani, Riccardo Colombo, Giancarlo Mauri, Paolo Cazzaniga
2016 — conf
Constraining Mechanism Based Simulations to Identify Ensembles of Parametrizations to Characterize Metabolic Features.
CIBB
Riccardo Colombo, Chiara Damiani, Giancarlo Mauri, Dario Pescini
2016 — conf
Constraint-Based Modeling and Simulation of Cell Populations.
WIVACE
Marzia Di Filippo, Chiara Damiani, Riccardo Colombo, Dario Pescini, Giancarlo Mauri
2016 — conf
Linking Alterations in Metabolic Fluxes with Shifts in Metabolite Levels by Means of Kinetic Modeling.
WIVACE
Chiara Damiani, Riccardo Colombo, Marzia Di Filippo, Dario Pescini, Giancarlo Mauri
2016 J jnl
Zooming-in on cancer metabolic rewiring with tissue specific constraint-based models.
Comput. Biol. Chem.
Marzia Di Filippo, Riccardo Colombo, Chiara Damiani, Dario Pescini, Daniela Gaglio, Marco Vanoni, Lilia Alberghina, Giancarlo Mauri
2015 — —
A Computational Approach for Multi-Level Biological Complex Systems Analysis.
Riccardo Colombo
2015 B conf
Proactive Particles in Swarm Optimization: A self-tuning algorithm based on Fuzzy Logic.
FUZZ-IEEE
Marco S. Nobile, Gabriella Pasi, Paolo Cazzaniga, Daniela Besozzi, Riccardo Colombo, Giancarlo Mauri
2015 J jnl
SupraBiology 2014: Promoting UK-China collaboration on Systems Biology and High Performance Computing.
Quant. Biol.
Ettore Murabito, Riccardo Colombo, Chengkun Wu, Malkhey Verma, Samrina Rehman, Jacky L. Snoep, Shaoliang Peng, Naiyang Guan, Xiangke Liao, Hans V. Westerhoff
2014 J jnl
An ensemble evolutionary constraint-based approach to understand the emergence of metabolic phenotypes.
Nat. Comput.
Chiara Damiani, Dario Pescini, Riccardo Colombo, Sara Molinari, Lilia Alberghina, Marco Vanoni, Giancarlo Mauri
2014 — conf
Directionality in cardiovascular variability interactions during head-down tilt test.
EMBC
Alberto Porta, Andrea Marchi, Vlasta Bari, Aparecida Maria Catai, Stefano Guzzetti, Ferdinando Raimondi, Riccardo Colombo
2013 — conf
An ensemble approach to the study of the emergence of metabolic and proliferative disorders via Flux Balance Analysis.
WIVACE
Chiara Damiani, Riccardo Colombo, Sara Molinari, Dario Pescini, Daniela Gaglio, Marco Vanoni, Lilia Alberghina, Giancarlo Mauri
2013 J jnl
In vivo and in silico analysis of PCNA ubiquitylation in the activation of the Post Replication Repair pathway in S. cerevisiae.
BMC Syst. Biol.
Flavio Amara, Riccardo Colombo, Paolo Cazzaniga, Dario Pescini, Attila Csikász-Nagy, Marco Falconi, Daniela Besozzi, Paolo Plevani