Reza Abbasi-Asl

29 papers Misc 1Journal 23Unranked 4

Year	Rank	Type	Title / Venue / Authors
2026	—	`conf`	Benchmarking and Mitigating the Impact of Noisy User Prompts in Medical VLMs via Cross-Modal Reflection. EACL (Industry Track) Zhiyu Xue, Reza Abbasi-Asl, Ramtin Pedarsani
2026	—	`conf`	Enhancing the Safety of Medical Vision-Language Models by Synthetic Demonstrations. EACL (Volume 1: Long Papers) Zhiyu Xue, Reza Abbasi-Asl, Ramtin Pedarsani
2026	J	`jnl`	ORGAN: Object-Centric Representation Learning using Cycle Consistent Generative Adversarial Networks. CoRR Joël Küchler, Ellen van Maren, Vaiva Vasiliauskaite, Katarina Vulic, Reza Abbasi-Asl, Stephan J. Ihle
2026	J	`jnl`	When more is not better: Predicting human emotional states with brain and bodily biosensors. Biomed. Signal Process. Control. Ti-Fen Pan, Bijurika Nandi, Richard Campusano, Alexander J. Simon, David A. Ziegler, Adam Gazzaley, Reza Abbasi-Asl, Theodore P. Zanto
2025	J	`jnl`	Compression-enabled interpretability of voxelwise encoding models. PLoS Comput. Biol. Fatemeh Kamali, Amir Abolfazl Suratgar, Mohammad Bagher Menhaj, Reza Abbasi-Asl
2025	J	`jnl`	Enhancing the Safety of Medical Vision-Language Models by Synthetic Demonstrations. CoRR Zhiyu Xue, Reza Abbasi-Asl, Ramtin Pedarsani
2025	J	`jnl`	Measuring temporal effects of agent knowledge by date-controlled tool use. CoRR R. Patrick Xian, Qiming Cui, Stefan Bauer, Reza Abbasi-Asl
2025	J	`jnl`	Pre-trained Transformer-models using chronic invasive electrophysiology for symptom decoding without patient-individual training. CoRR Timon Merk, Saeed Salehi, Richard M. Köhler, Qiming Cui, Maria Olaru, Amelia Hahn, Nicole R. Provenza, Simon Little, Reza Abbasi-Asl, Philip A. Starr, Wolf-Julian Neumann
2025	J	`jnl`	Robustness tests for biomedical foundation models should tailor to specification. CoRR R. Patrick Xian, Noah R. Baker, Tom David, Qiming Cui, A Jay Holmgren, Stefan Bauer, Madhumita Sushil, Reza Abbasi-Asl
2025	J	`jnl`	Robustness tests for biomedical foundation models should tailor to specifications. npj Digit. Medicine R. Patrick Xian, Noah R. Baker, Tom David, Qiming Cui, A Jay Holmgren, Stefan Bauer, Madhumita Sushil, Reza Abbasi-Asl
2024	—	`conf`	7T MRI Synthesization from 3T Acquisitions. MICCAI (7) Qiming Cui, Duygu Tosun, Pratik Mukherjee, Reza Abbasi-Asl
2024	J	`jnl`	7T MRI Synthesization from 3T Acquisitions. CoRR Qiming Cui, Duygu Tosun, Reza Abbasi-Asl
2024	J	`jnl`	Assessing biomedical knowledge robustness in large language models by query-efficient sampling attacks. Trans. Mach. Learn. Res. Rui Patrick Xian, Alex J. Lee, Satvik Lolla, Vincent Wang, Russell Ro, Qiming Cui, Reza Abbasi-Asl
2024	J	`jnl`	Opportunities in deep learning methods development for computational biology. CoRR Alex J. Lee, Reza Abbasi-Asl
2024	J	`jnl`	Zero-shot sampling of adversarial entities in biomedical question answering. CoRR R. Patrick Xian, Alex J. Lee, Vincent Wang, Qiming Cui, Russell Ro, Reza Abbasi-Asl
2023	J	`jnl`	Editorial: Functional microcircuits in the brain and in artificial intelligent systems. Frontiers Comput. Neurosci. Jung H. Lee, Yoonsuck Choe, Salva Ardid, Reza Abbasi-Asl, Michelle McCarthy, Brian Hu
2023	J	`jnl`	Machine Learning for Uncovering Biological Insights in Spatial Transcriptomics Data. CoRR Alex J. Lee, Robert Cahill, Reza Abbasi-Asl
2022	J	`jnl`	Robust Registration of Medical Images in the Presence of Spatially-Varying Noise. Algorithms Reza Abbasi-Asl, Aboozar Ghaffari, Emad Fatemizadeh
2021	J	`jnl`	Multi-Modal Prototype Learning for Interpretable Multivariable Time Series Classification. CoRR Gaurav R. Ghosal, Reza Abbasi-Asl
2021	J	`jnl`	Structural Compression of Convolutional Neural Networks with Applications in Interpretability. Frontiers Big Data Reza Abbasi-Asl, Bin Yu
2019	—	`conf`	Brain-Computer Interface in Virtual Reality. NER Reza Abbasi-Asl, Mohammad Keshavarzi, Dorian Yao Chan
2019	J	`jnl`	Interpretable machine learning: definitions, methods, and applications. CoRR W. James Murdoch, Chandan Singh, Karl Kumbier, Reza Abbasi-Asl, Bin Yu
2018	J	`jnl`	Brain-Computer Interface in Virtual Reality. CoRR Reza Abbasi-Asl, Mohammad Keshavarzi, Dorian Yao Chan
2018	—	`—`	Interpretable Machine Learning with Applications in Neuroscience. Reza Abbasi-Asl
2018	J	`jnl`	Visual physiology of the layer 4 cortical circuit in silico. PLoS Comput. Biol. Anton Arkhipov, Nathan W. Gouwens, Yazan N. Billeh, Sergey L. Gratiy, Ramakrishnan Iyer, Ziqiang Wei, Zihao Xu, Reza Abbasi-Asl, Jim Berg, Michael A. Buice, Nicholas Cain, Nuno daCosta, Saskia C. J. De Vries, Daniel Denman, Severine Durand, David Feng, Tim Jarsky, Jérôme A. Lecoq, Brian Lee, Lu Li, Stefan Mihalas, Gabriel Koch Ocker, Shawn R. Olsen, R. Clay Reid, Gilberto Soler-Llavina, Staci A. Sorensen, Quanxin Wang, Jack Waters, Massimo Scanziani, Christof Koch
2017	J	`jnl`	Interpreting Convolutional Neural Networks Through Compression. CoRR Reza Abbasi-Asl, Bin Yu
2017	J	`jnl`	Robust Image Registration via Empirical Mode Decomposition. CoRR Reza Abbasi-Asl, Aboozar Ghaffari, Emad Fatemizadeh
2017	J	`jnl`	Structural Compression of Convolutional Neural Networks Based on Greedy Filter Pruning. CoRR Reza Abbasi-Asl, Bin Yu
2016	Misc	`conf`	Do retinal ganglion cells project natural scenes to their principal subspace and whiten them? ACSSC Reza Abbasi-Asl, Cengiz Pehlevan, Bin Yu, Dmitri B. Chklovskii