Renmin Han

41 papers A* 4Journal 33Unranked 4
YearRankTypeTitle / Venue / Authors
2026 J jnl
DeepRMSF: a deep learning-based automated approach for predicting atomic-level flexibility in RNA structure.
Briefings Bioinform.
Chenjie Feng, Xiaowen Sun, Xintao Song, Lei Bao, Weikang Gong, Renmin Han
2025 A* conf
A Gaussian Filter-Based 3D Registration Method for Series Section Electron Microscopy.
AAAI
Zhenbang Zhang, Hongjia Li, Zhiqiang Xu, Wenjia Meng, Renmin Han
2025 J jnl
A noise-robust classification method for cryo-ET subtomograms with out-of-distribution detection.
Bioinform.
Wenjia Meng, Xueshi Yu, Tingting Zhang, Renmin Han
2025 J jnl
ADMGCN: graph convolutional network for Alzheimer's disease diagnosis with a meta-learning paradigm.
Bioinform.
Xiaowen Sun, Jiahao Li, Guiying Yan, Renmin Han
2025 J jnl
CryoAlign2: efficient global and local Cryo-EM map retrieval based on parallel-accelerated local spatial structural features.
Bioinform.
Zhe Liu, Bintao He, Tian Zhang, Chenjie Feng, Fa Zhang, Zhongjun Yang, Renmin Han
2025 J jnl
Few-shot classification of Cryo-ET subvolumes with deep Brownian distance covariance.
Briefings Bioinform.
Xueshi Yu, Renmin Han, Haitao Jiao, Wenjia Meng
2025 J jnl
GaussianEM: Model compositional and conformational heterogeneity using 3D Gaussians.
CoRR
Bintao He, Yiran Cheng, Hongjia Li, Xiang Gao, Xin Gao, Fa Zhang, Renmin Han
2025 — conf
OC-BA: Optimal Control-Enhanced Bundle Adjustment for Cryo-ET Image Alignment.
BIBM
Hailin Xu, Hongxia Wang, Xinyan Li, Zihe Xu, Huanshui Zhang, Renmin Han
2025 J jnl
TiltRec: an ultra-fast and open-source toolkit for cryo-electron tomographic reconstruction.
Bioinform.
Yanxin Jiao, Hongjia Li, Yang Xue, Guoliang Yang, Lei Qi, Fa Zhang, Dawei Zang, Renmin Han
2025 J jnl
UPicker: a semi-supervised particle picking transformer method for cryo-EM micrographs.
Briefings Bioinform.
Chi Zhang, Yiran Cheng, Kaiwen Feng, Fa Zhang, Renmin Han, Jieqing Feng
2024 J jnl
FP-Zernike: An Open-source Structural Database Construction Toolkit for Fast Structure Retrieval.
Genom. Proteom. Bioinform.
Junhai Qi, Chenjie Feng, Yulin Shi, Jianyi Yang, Fa Zhang, Guojun Li, Renmin Han
2024 J jnl
GFPack++: Improving 2D Irregular Packing by Learning Gradient Field with Attention.
CoRR
Tianyang Xue, Lin Lu, Yang Liu, Mingdong Wu, Hao Dong, Yanbin Zhang, Renmin Han, Baoquan Chen
2024 J jnl
Highly efficient clustering of long-read transcriptomic data with GeLuster.
Bioinform.
Junchi Ma, Xiaoyu Zhao, Enfeng Qi, Renmin Han, Ting Yu, Guojun Li
2024 J jnl
Improved Denoising of Cryo-Electron Microscopy Micrographs with Simulation-Aware Pretraining.
J. Comput. Biol.
Zhidong Yang, Hongjia Li, Dawei Zang, Renmin Han, Fa Zhang
2024 A* conf
Serial Section Microscopy Image Inpainting Guided by Axial Optical Flow.
ACM Multimedia
Yiran Cheng, Bintao He, Fa Zhang, Renmin Han
2023 J jnl
A physics-informed convolutional neural network for the simulation and prediction of two-phase Darcy flows in heterogeneous porous media.
J. Comput. Phys.
Zhao Zhang, Xia Yan, Piyang Liu, Kai Zhang, Renmin Han, Sheng Wang
2023 J jnl
CryoAlign: feature-based method for global and local 3D alignment of EM density maps.
CoRR
Bintao He, Fa Zhang, Chenjie Feng, Jianyi Yang, Xin Gao, Renmin Han
2023 — conf
SaID: Simulation-Aware Image Denoising Pre-trained Model for Cryo-EM Micrographs.
ISBRA
Zhidong Yang, Hongjia Li, Dawei Zang, Renmin Han, Fa Zhang
2022 J jnl
Correction of image distortion in large-field ssEM stitching by an unsupervised intermediate-space solving network.
Bioinform.
Bintao He, Yan Zhang, Fa Zhang, Renmin Han
2022 J jnl
Macromolecules Structural Classification With a 3D Dilated Dense Network in Cryo-Electron Tomography.
IEEE ACM Trans. Comput. Biol. Bioinform.
Shan Gao, Renmin Han, Xiangrui Zeng, Zhiyong Liu, Min Xu, Fa Zhang
2022 J jnl
Neighborhood-aware Geometric Encoding Network for Point Cloud Registration.
CoRR
Lifa Zhu, Haining Guan, Changwei Lin, Renmin Han
2022 J jnl
Noise-Transfer2Clean: denoising cryo-EM images based on noise modeling and transfer.
Bioinform.
Hongjia Li, Hui Zhang, Xiaohua Wan, Zhidong Yang, Chengmin Li, Jintao Li, Renmin Han, Ping Zhu, Fa Zhang
2021 A* conf
A Hybrid Frequency-Spatial Domain Model for Sparse Image Reconstruction in Scanning Transmission Electron Microscopy.
ICCV
Bintao He, Fa Zhang, Huanshui Zhang, Renmin Han
2021 J jnl
A novel constrained reconstruction model towards high-resolution subtomogram averaging.
Bioinform.
Renmin Han, Lun Li, Peng Yang, Fa Zhang, Xin Gao
2021 J jnl
Robust and ultrafast fiducial marker correspondence in electron tomography by a two-stage algorithm considering local constraints.
Bioinform.
Renmin Han, Guojun Li, Xin Gao
2021 A* conf
Self-Supervised Cryo-Electron Tomography Volumetric Image Restoration from Single Noisy Volume with Sparsity Constraint.
ICCV
Zhidong Yang, Fa Zhang, Renmin Han
2021 J jnl
TransRef enables accurate transcriptome assembly by redefining accurate neo-splicing graphs.
Briefings Bioinform.
Ting Yu, Renmin Han, Zhaoyuan Fang, Zengchao Mu, Hongyu Zheng, Juntao Liu
2020 J jnl
Compressed sensing improved iterative reconstruction-reprojection algorithm for electron tomography.
BMC Bioinform.
Lun Li, Renmin Han, Zhaotian Zhang, Tiande Guo, Zhiyong Liu, Fa Zhang
2020 — conf
Dilated-DenseNet for Macromolecule Classification in Cryo-electron Tomography.
ISBRA
Shan Gao, Renmin Han, Xiangrui Zeng, Xuefeng Cui, Zhiyong Liu, Min Xu, Fa Zhang
2020 J jnl
Novel algorithms for efficient subsequence searching and mapping in nanopore raw signals towards targeted sequencing.
Bioinform.
Renmin Han, Sheng Wang, Xin Gao
2019 J jnl
A joint method for marker-free alignment of tilt series in electron tomography.
Bioinform.
Renmin Han, Zhipeng Bao, Xiangrui Zeng, Tongxin Niu, Fa Zhang, Min Xu, Xin Gao
2019 J jnl
AuTom-dualx: a toolkit for fully automatic fiducial marker-based alignment of dual-axis tilt series with simultaneous reconstruction.
Bioinform.
Renmin Han, Xiaohua Wan, Lun Li, Albert F. Lawrence, Peng Yang, Yu Li, Sheng Wang, Fei Sun, Zhiyong Liu, Xin Gao, Fa Zhang
2019 J jnl
PIXER: an automated particle-selection method based on segmentation using a deep neural network.
BMC Bioinform.
Jingrong Zhang, Zihao Wang, Yu Chen, Renmin Han, Zhiyong Liu, Fei Sun, Fa Zhang
2018 J jnl
A fast fiducial marker tracking model for fully automatic alignment in electron tomography.
Bioinform.
Renmin Han, Fa Zhang, Xin Gao
2018 J jnl
An accurate and rapid continuous wavelet dynamic time warping algorithm for end-to-end mapping in ultra-long nanopore sequencing.
Bioinform.
Renmin Han, Yu Li, Xin Gao, Sheng Wang
2018 J jnl
DLBI: Deep learning guided Bayesian inference for structure reconstruction of super-resolution fluorescence microscopy.
CoRR
Yu Li, Fan Xu, Fa Zhang, Pingyong Xu, Mingshu Zhang, Ming Fan, Lihua Li, Xin Gao, Renmin Han
2018 J jnl
DLBI: deep learning guided Bayesian inference for structure reconstruction of super-resolution fluorescence microscopy.
Bioinform.
Yu Li, Fan Xu, Fa Zhang, Pingyong Xu, Mingshu Zhang, Ming Fan, Lihua Li, Xin Gao, Renmin Han
2018 J jnl
DeepSimulator: a deep simulator for Nanopore sequencing.
Bioinform.
Yu Li, Renmin Han, Chongwei Bi, Mo Li, Sheng Wang, Xin Gao
2018 — conf
Fiducial marker detection via deep learning approach for electron tomography.
BIBM
Yu Hao, Renmin Han, Xiaohua Wan, Fa Zhang, Shiwei Sun
2013 J jnl
Iterative Methods in Large Field Electron Microscope Tomography.
SIAM J. Sci. Comput.
Xiaohua Wan, Sebastien Phan, Albert F. Lawrence, Fa Zhang, Renmin Han, Zhiyong Liu, Mark H. Ellisman
2010 J jnl
QoS Routing in General Petersen-Torus Networks: A Case Study.
J. Convergence Inf. Technol.
Renmin Han, Jun Huang