Rency S. Varghese

22 papers A 1B 1C 2Misc 1Journal 3Unranked 14
YearRankTypeTitle / Venue / Authors
2023 — conf
Bayesian Approach Integrating Prior Knowledge for Identifying miRNA-mRNA Interactions in Hepatocellular Carcinoma.
BIBM
Yichen Guo, Marie Denis, Rency S. Varghese, Sidharth S. Jain, Mahlet G. Tadesse, Habtom W. Ressom
2023 — conf
Deep Learning Based Metabolite Annotation.
EMBC
Hoi Yan Katharine Chau, Hongyu Ao, Xinran Zhang, Shijinqiu Gao, Rency S. Varghese, Habtom W. Ressom
2022 — conf
A Bayesian two-step integrative procedure incorporating prior knowledge for the identification of miRNA-mRNAs involved in hepatocellular carcinoma.
EMBC
Marie Denis, Rency S. Varghese, Megan E. Barefoot, Mahlet G. Tadesse, Habtom W. Ressom
2022 — conf
Cell-type Deconvolution and Age Estimation Using DNA Methylation Reveals NK Cell Deficiency in the Hepatocellular Carcinoma Microenvironment.
BIBM
Sidharth S. Jain, Megan E. Barefoot, Rency S. Varghese, Habtom W. Ressom
2020 — conf
Epigenetic changes associated with mechanisms of disparities in hepatocellular carcinoma.
EMBC
Rency S. Varghese, Yuan Zhou, Yifan Chen, Megan E. Barefoot, Mahlet G. Tadesse, Habtom W. Ressom
2020 — conf
Integrative Analysis to Identify Race-Associated Metabolite Biomarkers for Hepatocellular Carcinoma.
EMBC
Yifan Chen, Megan E. Barefoot, Rency S. Varghese, Kuijun Wang, Cristina Di Poto, Habtom W. Ressom
2019 — conf
Integrative Analysis of DNA Methylation and Gene Expression Patterns in Tissues from Hepatocellular Carcinoma Patients.
BIBM
Megan E. Barefoot, Yifan Chen, Rency S. Varghese, Yuan Zhou, Habtom W. Ressom
2019 — conf
Multi-omic Pathway and Network Analysis to Identify Biomarkers for Hepatocellular Carcinoma.
EMBC
Megan E. Barefoot, Rency S. Varghese, Yuan Zhou, Cristina Di Poto, Alessia Ferrarini, Habtom W. Ressom
2018 — conf
INDEED: R package for network based differential expression analysis.
BIBM
Zhenzhi Li, Yiming Zuo, Chaohui Xu, Rency S. Varghese, Habtom W. Ressom
2016 — conf
Multi-omic approaches for characterization of hepatocellular carcinoma.
EMBC
Habtom W. Ressom, Cristina Di Poto, Alessia Ferrarini, Yunli Hu, Mohammad R. Nezami Ranjbar, Ehwang Song, Rency S. Varghese, Minkun Wang, Shiyue Zhou, Rui Zhu, Yiming Zuo, Mahlet G. Tadesse, Yehia Mechref
2016 — conf
Network-based analysis of reverse phase protein array data.
BIBM
Rency S. Varghese, Yiming Zuo, Yi Zhao, Yong-Wei Zhang, Sandra A. Jablonski, Mariaelena Pierobon, Emanuel F. Petricoin, Habtom W. Ressom, Louis M. Weiner
2011 — conf
Meta-analysis of LC-MS based metabolomic experiments.
BIBM Workshops
Rency S. Varghese, Bin Zhou, Habtom W. Ressom
2010 — conf
Using a spike-in experiment to evaluate analysis of LC-MS data.
BIBM Workshops
Leepika Tuli, Tsung-Heng Tsai, Rency S. Varghese, Amrita K. Cheema, Habtom W. Ressom
2008 Misc conf
Analysis of MALDI-TOF Spectrometry Data for Detection of Glycan Biomarkers.
Pacific Symposium on Biocomputing
Habtom W. Ressom, Rency S. Varghese, Lenka Goldman, Christopher A. Loffredo, Mohamed Abdel-Hamid, Zuzana Kyselova, Yehia Mechref, Milos V. Novotny, Radoslav Goldman
2007 J jnl
Peak selection from MALDI-TOF mass spectra using ant colony optimization.
Bioinform.
Habtom W. Ressom, Rency S. Varghese, Steven K. Drake, Glen L. Hortin, Mohamed Abdel-Hamid, Christopher A. Loffredo, Radoslav Goldman
2006 — conf
Ant Colony Optimization for Biomarker Identification from MALDI-TOF Mass Spectra.
EMBC
Habtom W. Ressom, Rency S. Varghese, Eduard Orvisky, Steven K. Drake, Glen L. Hortin, Mohamed Abdel-Hamid, Christopher A. Loffredo, Radoslav Goldman
2006 C conf
Biomarker Identification and Rule Extraction from Mass Spectral Serum Profiles.
CIBCB
Habtom W. Ressom, Rency S. Varghese, Eduard Orvisky, Steven K. Drake, Glen L. Hortin, Mohamed Abdel-Hamid, Christopher A. Loffredo, Radoslav Goldman
2005 C conf
Analysis of MALDI-TOF Serum Profiles for Biomarker Selection and Sample Classification.
CIBCB
Habtom W. Ressom, Rency S. Varghese, Eduard Orvisky, Steven K. Drake, Glen L. Hortin, Mohamed Abdel-Hamid, Christopher A. Loffredo, Radoslav Goldman
2005 J jnl
Analysis of mass spectral serum profiles for biomarker selection.
Bioinform.
Habtom W. Ressom, Rency S. Varghese, Mohamed Abdel-Hamid, Sohair Abdel-Latif Eissa, Daniel Saha, Lenka Goldman, Emanuel F. Petricoin, Thomas P. Conrads, Timothy D. Veenstra, Christopher A. Loffredo, Radoslav Goldman
2005 J jnl
Applications of fuzzy logic in genomics.
Fuzzy Sets Syst.
Habtom W. Ressom, Padma Natarajan, Rency S. Varghese, Mohamad T. Musavi
2005 A conf
Particle swarm optimization for analysis of mass spectral serum profiles.
GECCO
Habtom W. Ressom, Rency S. Varghese, Daniel Saha, Eduard Orvisky, Lenka Goldman, Emanuel F. Petricoin, Thomas P. Conrads, Timothy D. Veenstra, Mohamed Abdel-Hamid, Christopher A. Loffredo, Radoslav Goldman
2003 B conf
Fuzzy logic-based gene regulatory network.
FUZZ-IEEE
Habtom W. Ressom, Dali Wang, Rency S. Varghese, Robert Reynolds