Ramon Grima

14 papers Journal 10Unranked 4
YearRankTypeTitle / Venue / Authors
2026 J jnl
From noise to models to numbers: Evaluating negative binomial models and parameter estimations in single-cell RNA-seq.
PLoS Comput. Biol.
Yiling Wang, Zhanpeng Shu, Zhixing Cao, Ramon Grima
2022 — conf
Bayesian Learning of Effective Chemical Master Equations in Crowded Intracellular Conditions.
CMSB
Svitlana Braichenko, Ramon Grima, Guido Sanguinetti
2022 J jnl
Characterizing non-exponential growth and bimodal cell size distributions in fission yeast: An analytical approach.
PLoS Comput. Biol.
Chen Jia, Abhyudai Singh, Ramon Grima
2022 J jnl
Concentration fluctuations in growing and dividing cells: Insights into the emergence of concentration homeostasis.
PLoS Comput. Biol.
Chen Jia, Abhyudai Singh, Ramon Grima
2022 J jnl
DelaySSAToolkit.jl: stochastic simulation of reaction systems with time delays in Julia.
Bioinform.
Xiaoming Fu, Xinyi Zhou, Dongyang Gu, Zhixing Cao, Ramon Grima
2022 — conf
Fluctuation-based approaches to infer kinetics of cell-state switching.
CDC
Michael M. Saint-Antoine, Ramon Grima, Abhyudai Singh
2021 J jnl
MomentClosure.jl: automated moment closure approximations in Julia.
Bioinform.
Augustinas Sukys, Ramon Grima
2019 — conf
Wasserstein Distances for Estimating Parameters in Stochastic Reaction Networks.
CMSB
Kaan Öcal, Ramon Grima, Guido Sanguinetti
2016 J jnl
Inference for Stochastic Chemical Kinetics Using Moment Equations and System Size Expansion.
PLoS Comput. Biol.
Fabian Fröhlich, Philipp Thomas, Atefeh Kazeroonian, Fabian J. Theis, Ramon Grima, Jan Hasenauer
2016 J jnl
Stochastic Simulation of Biomolecular Networks in Dynamic Environments.
PLoS Comput. Biol.
Margaritis Voliotis, Philipp Thomas, Ramon Grima, Clive G. Bowsher
2012 — conf
Computation of biochemical pathway fluctuations beyond the linear noise approximation using iNA.
BIBM
Philipp Thomas, Hannes Matuschek, Ramon Grima
2012 J jnl
Efficient fluctuation analysis of biochemical pathways beyond the linear noise approximation using iNA
CoRR
Philipp Thomas, Hannes Matuschek, Ramon Grima
2012 J jnl
The slow-scale linear noise approximation: an accurate, reduced stochastic description of biochemical networks under timescale separation conditions.
BMC Syst. Biol.
Philipp Thomas, Arthur V. Straube, Ramon Grima
2009 J jnl
Investigating the robustness of the classical enzyme kinetic equations in small intracellular compartments.
BMC Syst. Biol.
Ramon Grima
2025 Best paper conf
Assessing the Effectiveness of the Tigress Obfuscator Against MOPSA and BinaryNinja.
CheckMATE
Nicolò Altamura, Enrico Bragastini, Marco Campion, Mila Dalla Preda
2026 Best paper preprint
ASSEMBLAGE-DEEPHISTORY: A Cross-Build Binary Dataset with Temporal Coverage.
arXiv
Chang Liu, Noah Fleischmann, Nicolò Altamura, Edward Raff, James Holt, Kristopher Micinski