Ramon Grima

14 papers Journal 10Unranked 4
YearRankTypeTitle / Venue / Authors
2026 J jnl
From noise to models to numbers: Evaluating negative binomial models and parameter estimations in single-cell RNA-seq.
PLoS Comput. Biol.
Yiling Wang, Zhanpeng Shu, Zhixing Cao, Ramon Grima
2022 — conf
Bayesian Learning of Effective Chemical Master Equations in Crowded Intracellular Conditions.
CMSB
Svitlana Braichenko, Ramon Grima, Guido Sanguinetti
2022 J jnl
Characterizing non-exponential growth and bimodal cell size distributions in fission yeast: An analytical approach.
PLoS Comput. Biol.
Chen Jia, Abhyudai Singh, Ramon Grima
2022 J jnl
Concentration fluctuations in growing and dividing cells: Insights into the emergence of concentration homeostasis.
PLoS Comput. Biol.
Chen Jia, Abhyudai Singh, Ramon Grima
2022 J jnl
DelaySSAToolkit.jl: stochastic simulation of reaction systems with time delays in Julia.
Bioinform.
Xiaoming Fu, Xinyi Zhou, Dongyang Gu, Zhixing Cao, Ramon Grima
2022 — conf
Fluctuation-based approaches to infer kinetics of cell-state switching.
CDC
Michael M. Saint-Antoine, Ramon Grima, Abhyudai Singh
2021 J jnl
MomentClosure.jl: automated moment closure approximations in Julia.
Bioinform.
Augustinas Sukys, Ramon Grima
2019 — conf
Wasserstein Distances for Estimating Parameters in Stochastic Reaction Networks.
CMSB
Kaan Öcal, Ramon Grima, Guido Sanguinetti
2016 J jnl
Inference for Stochastic Chemical Kinetics Using Moment Equations and System Size Expansion.
PLoS Comput. Biol.
Fabian Fröhlich, Philipp Thomas, Atefeh Kazeroonian, Fabian J. Theis, Ramon Grima, Jan Hasenauer
2016 J jnl
Stochastic Simulation of Biomolecular Networks in Dynamic Environments.
PLoS Comput. Biol.
Margaritis Voliotis, Philipp Thomas, Ramon Grima, Clive G. Bowsher
2012 — conf
Computation of biochemical pathway fluctuations beyond the linear noise approximation using iNA.
BIBM
Philipp Thomas, Hannes Matuschek, Ramon Grima
2012 J jnl
Efficient fluctuation analysis of biochemical pathways beyond the linear noise approximation using iNA
CoRR
Philipp Thomas, Hannes Matuschek, Ramon Grima
2012 J jnl
The slow-scale linear noise approximation: an accurate, reduced stochastic description of biochemical networks under timescale separation conditions.
BMC Syst. Biol.
Philipp Thomas, Arthur V. Straube, Ramon Grima
2009 J jnl
Investigating the robustness of the classical enzyme kinetic equations in small intracellular compartments.
BMC Syst. Biol.
Ramon Grima