Ramin Shahidi

26 papers A 5B 1Journal 3Unranked 17
YearRankTypeTitle / Venue / Authors
2009 conf
Image-Guided Procedures
Johann Hummel, Michael Figl, Michael R. Bax, Ramin Shahidi, Helmar Bergmann, Wolfgang Birkfellner
2005 conf
Image-Guided Procedures
Johann Hummel, Calvin R. Maurer Jr., Michael Figl, Michael R. Bax, Helmar Bergmann, Wolfgang Birkfellner, Ramin Shahidi
2004 conf
CARS
Steffen K. Rosahl, Günter C. Feigl, Alireza Gharabaghi, U. Hubbe, Ramin Shahidi, J. Zentner, Madjid Samii
2003 conf
WBIR
Daniel B. Russakoff, Torsten Rohlfing, Anthony Ho, Daniel H. Kim, Ramin Shahidi, John R. Adler Jr., Calvin R. Maurer Jr.
2003 B conf
Image Processing
Daniel B. Russakoff, Torsten Rohlfing, Daniel Rueckert, Ramin Shahidi, Daniel H. Kim, Calvin R. Maurer Jr.
2003 conf
MICCAI (1)
Daniel B. Russakoff, Torsten Rohlfing, Ramin Shahidi, Daniel H. Kim, John R. Adler Jr., Calvin R. Maurer Jr.
2003 conf
CARS
Michael Meehan, Calvin R. Maurer Jr., Torsten Rohlfing, Ramin Shahidi, Amrit K. Rao, Sabine Girod
2003 conf
CARS
Alireza Gharabaghi, Steffen K. Rosahl, Günter C. Feigl, H. J. Freund, Marcos Soares Tatagiba, Ramin Shahidi, Madjid Samii
2002 conf
Image-Guided Procedures
Michael R. Bax, Rasool Khadem, Jeremy A. Johnson, Eric P. Wilkinson, Ramin Shahidi
2002 J jnl
IEEE Trans. Medical Imaging
Ramin Shahidi, Michael R. Bax, Calvin R. Maurer Jr., Jeremy A. Johnson, Eric P. Wilkinson, Bai Wang, Jay B. West, Martin J. Citardi, Kim H. Manwaring, Rasool Khadem
2002 J jnl
IEEE Trans. Medical Imaging
Pierre Jannin, J. Michael Fitzpatrick, David J. Hawkes, Xavier Pennec, Ramin Shahidi, Michael W. Vannier
2001 A conf
MICCAI
Jay B. West, Rasool Khadem, Shao Chin, Ramin Shahidi
2001 conf
Image-Guided Procedures
Hamid Reza Abbasi, Sanaz Hariri, Daniel H. Kim, Ramin Shahidi, Gary Steinberg
2001 conf
CARS
Hamid Reza Abbasi, Shao Chin, Daniel H. Kim, Gary Steinberg, Ramin Shahidi
2001 conf
CARS
Hamid Reza Abbasi, Robert P. Grzeszczuk, Shao Chin, Hilary J. Holz, Salim Hariri, Rana Badr, Daniel H. Kim, John R. Adler Jr., Ramin Shahidi
2001 conf
Image-Guided Procedures
Hamid Reza Abbasi, Robert P. Grzeszczuk, Shao Chin, Hilary J. Holz, Sanaz Hariri, Rana Badr, Daniel H. Kim, John R. Adler Jr., Ramin Shahidi
2001 A conf
MICCAI
Rasool Khadem, Michael R. Bax, Jeremy A. Johnson, Eric P. Wilkinson, Ramin Shahidi
2001 conf
CARS
Hilary J. Holz, Daniel B. Russakoff, Hamid Reza Abbasi, Daniel H. Kim, Gary Steinberg, Ramin Shahidi
2001 conf
CARS
J. Nerney Welch, Jeremy A. Johnson, Rana Badr, Michael R. Bax, S. K. S. So, Thomas M. Krummel, Ramin Shahidi
2001 conf
Image-Guided Procedures
Jacqueline Nerney Welch, Jeremy A. Johnson, Michael R. Bax, Rana Badr, Sam So, Thomas M. Krummel, Ramin Shahidi
2001 conf
CARS
Lawrence Clarke, Richard D. Bucholz, Henry Fuchs, Ron Kikinis, Richard A. Robb, Ramin Shahidi, Michael W. Vannier
2000 A conf
MICCAI
Hamid Reza Abbasi, Salim Hariri, D. Martin, Daniel H. Kim, John R. Adler Jr., Gary Steinberg, Ramin Shahidi
2000 A conf
MICCAI
Robert P. Grzeszczuk, Shao Chin, Rebecca Fahrig, Hamid Reza Abbasi, Hilary J. Holz, Daniel H. Kim, John R. Adler Jr., Ramin Shahidi
1998 J jnl
Proc. IEEE
Ramin Shahidi, Rhea Tombropoulos, Robert P. Grzeszczuk
1998 A conf
MICCAI
Ramin Shahidi, Bai Wang, Marc Epitaux, Robert P. Grzeszczuk, John R. Adler Jr.
1996 conf
VBC
Ramin Shahidi, V. Argiro, Sandy Napel, L. Gray, H. Page McAdams, Geoffrey D. Rubin, Christopher F. Beaulieu, R. Brooke Jeffrey Jr., A. Johnson
redb/extractors/decompiler/_archive/DecompileGhidra-old.py
← Index redb/extractors/decompiler/_archive/DecompileGhidra-old.py python
from hashlib import sha256
import inspect
from pathlib import Path
import subprocess
import json
import subprocess
import json
import os
import tempfile
import uuid
import shutil
import time

from dotenv import load_dotenv

from redb.extractors.enum import Tag
from redb.models.dataclasses import Decompiled
from redb.extractors.extractor import Extractor


class DecompileGhidra(Extractor):
    def __init__(
        self,
        filepath,
        log,
        index_prefix=None,
        elastic_index=None,
        known_benign=False,
        known_malicious=False,
    ):
        super().__init__(
            filepath, log, index_prefix, elastic_index, known_benign, known_malicious
        )
        self.log.debug(inspect.currentframe().f_code.co_name)
        self.elastic_index = self.index_prefix + "-ghidra"
        self.ghidra_path = "/opt/ghidra"
        self.java_script_path = (
            self.ghidra_path
            + "/Ghidra/Features/Base/ghidra_scripts/GhidraDecompilerScript.java"
        )
        self.decompiled = None
        load_dotenv()
        self.decompiled_folder = os.getenv("DECOMPILED_FOLDER", "/opt/decompiled")
        self.log.debug(f"Decompiled folder: {self.decompiled_folder}")

    def run_command(self, cmd, env=None):
        try:
            self.log.info(f"Starting command: {' '.join(cmd)}")
            start_time = time.time()
            TIMEOUT = 1200  # 20 minutes in seconds
            process = subprocess.Popen(
                cmd, env=env, stdout=subprocess.PIPE, stderr=subprocess.PIPE, text=True
            )

            while True:
                output = process.stdout.readline()
                if output:
                    print(output.strip())
                if process.poll() is not None:
                    break
            try:
                stdout, stderr = process.communicate(timeout=TIMEOUT)
            except subprocess.TimeoutExpired:
                process.kill()
                self.log.error(f"Ghidra timed out after {TIMEOUT} seconds")
                # raise subprocess.TimeoutExpired(process.args, TIMEOUT)
                return None
            end_time = time.time()

            self.log.debug(
                f"Command finished. Execution time: {end_time - start_time:.2f} seconds"
            )
            self.log.debug(f"Return code: {process.returncode}")

            if process.returncode != 0:
                self.log.error(f"Error output:\n{stderr}")
                return None
            return stdout
        except Exception as e:
            self.log.error(f"Error running command {' '.join(cmd)}: {e}")
            return None

    def analyze_binary(self):
        self.log.debug(f"Ghidra path: {self.ghidra_path}")
        self.log.debug(f"Binary path: {self.filepath}")
        self.log.debug(f"Java script path: {self.java_script_path}")

        # Check if Java script exists
        if not os.path.exists(self.java_script_path):
            self.log.error(f"Error: Java script not found at {self.java_script_path}")
            return None

        # Set up environment variables
        env = os.environ.copy()
        java_home = "/usr/lib/jvm/java-17-openjdk-amd64"  # Adjust this path if needed
        env["JAVA_HOME"] = java_home
        env["PATH"] = f"{java_home}/bin:{env['PATH']}"
        env["LD_LIBRARY_PATH"] = f"{java_home}/lib:{env.get('LD_LIBRARY_PATH', '')}"
        env["DECOMPILED_FOLDER"] = self.decompiled_folder

        # Print environment variables for debugging
        self.log.debug(f"JAVA_HOME: {env['JAVA_HOME']}")
        self.log.debug(f"PATH: {env['PATH']}")
        self.log.debug(f"LD_LIBRARY_PATH: {env['LD_LIBRARY_PATH']}")

        # Check Ghidra installation
        analyzeHeadless_path = f"{self.ghidra_path}/support/analyzeHeadless"
        self.log.debug(
            f"analyzeHeadless exists: {os.path.exists(analyzeHeadless_path)}"
        )

        # Create a temporary project directory
        project_path = tempfile.gettempdir() + "/ghidra_" + str(uuid.uuid4())
        os.makedirs(project_path, exist_ok=True)
        self.log.debug(f"Created temporary project path: {project_path}")
        output_file = ""

        try:
            # Run Ghidra's headless analyzer
            analyze_cmd = [
                analyzeHeadless_path,
                project_path,
                "TempProject",
                "-import",
                self.filepath,
                "-postScript",
                self.java_script_path,
                self.sha256,
                "-deleteProject",
            ]

            result = self.run_command(analyze_cmd, env=env)
            if result is None:
                return None

            # Read the output JSON file
            output_file = os.path.join(
                self.decompiled_folder, self.sha256 + "-decompiled.json"
            )
            if os.path.exists(output_file):
                with open(output_file, "r") as f:
                    functions = json.load(f)
                return functions
            else:
                self.log.error(
                    f"Output file {output_file} not found. Ghidra analysis may have failed."
                )
                return None
        finally:
            # Clean up
            if os.path.exists(project_path):
                shutil.rmtree(project_path)
                self.log.debug(f"Deleted temporary project path: {project_path}")

    def extract(self):
        self.log.debug(inspect.currentframe().f_code.co_name)
        try:
            functions = self.analyze_binary()

            if functions:
                self.log.info(f"Extracted functions from {self.filepath}:")
                for func in functions:
                    id = sha256(func["address"].encode()).hexdigest()
                    self.decompiled = Decompiled(
                        _id=id,
                        decompiled_function_name=func["name"],
                        decompiled_function_address=func["address"],
                        decompiled_function=func["decompiled"],
                    )
                    self.export_to_elastic([self.decompiled])
            else:
                self.log.error("No decompiled functions extracted.")
            return True
        except Exception as e:
            self.log.error(f"Error extracting decompiled information: {e}")
            return None

    def tag(self):
        return Tag.DECOMPILED.value