Rajarsi Gupta

37 papers A* 3B 1Journal 18Unranked 15
YearRankTypeTitle / Venue / Authors
2026 J jnl
IEEE Trans. Medical Imaging
Shahira Abousamra, Danielle Fassler, Rajarsi Gupta, Tahsin Kurc, Luisa F. Escobar-Hoyos, Dimitris Samaras, Kenneth R. Shroyer, Joel H. Saltz, Chao Chen
2026 J jnl
Medical Image Anal.
Souradeep Chakraborty, Ruoyu Xue, Rajarsi Gupta, Oksana Yaskiv, Constantin Friedman, Natallia Sheuka, Dana Perez, Paul Friedman, Won-Tak Choi, Waqas Mahmud, Beatrice Knudsen, Gregory J. Zelinsky, Joel H. Saltz, Dimitris Samaras
2026 J jnl
npj Digit. Medicine
Jakub R. Kaczmarzyk, Sarah C. Van Alsten, Alyssa J. Cozzo, Rajarsi Gupta, Peter K. Koo, Melissa A. Troester, Katherine A. Hoadley, Joel H. Saltz
2025 A* conf
CVPR
Srikar Yellapragada, Alexandros Graikos, Kostas Triaridis, Prateek Prasanna, Rajarsi Gupta, Joel H. Saltz, Dimitris Samaras
2024 conf
MICCAI (3)
Souradeep Chakraborty, Rajarsi Gupta, Oksana Yaskiv, Constantin Friedman, Natallia Sheuka, Dana Perez, Paul Friedman, Gregory J. Zelinsky, Joel H. Saltz, Dimitris Samaras
2024 J jnl
CoRR
Souradeep Chakraborty, Dana Perez, Paul Friedman, Natallia Sheuka, Constantin Friedman, Oksana Yaskiv, Rajarsi Gupta, Gregory J. Zelinsky, Joel H. Saltz, Dimitris Samaras
2024 J jnl
IEEE Trans. Medical Imaging
Kevin Thandiackal, Luigi Piccinelli, Rajarsi Gupta, Pushpak Pati, Orcun Goksel
2024 B conf
IEEE Big Data
Ujjwal Baid, Sarthak Pati, Tahsin M. Kurç, Rajarsi Gupta, Erich Bremer, Shahira Abousamra, Siddhesh P. Thakur, Joel H. Saltz, Spyridon Bakas
2024 conf
CVPR Workshops
Juyoung Yun, Shahira Abousamra, Chen Li, Rajarsi Gupta, Tahsin M. Kurç, Dimitris Samaras, Alison L. Van Dyke, Joel H. Saltz, Chao Chen
2024 conf
ECCV (32)
Minh-Quan Le, Alexandros Graikos, Srikar Yellapragada, Rajarsi Gupta, Joel H. Saltz, Dimitris Samaras
2024 J jnl
CoRR
Minh-Quan Le, Alexandros Graikos, Srikar Yellapragada, Rajarsi Gupta, Joel H. Saltz, Dimitris Samaras
2023 J jnl
Comput. Methods Programs Biomed.
Jakub R. Kaczmarzyk, Rajarsi Gupta, Tahsin M. Kurç, Shahira Abousamra, Joel H. Saltz, Peter K. Koo
2023 J jnl
CoRR
Erich Bremer, Tammy DiPrima, Joseph Balsamo, Jonas S. Almeida, Rajarsi Gupta, Joel H. Saltz
2023 J jnl
CoRR
Jakub R. Kaczmarzyk, Alan O'Callaghan, Fiona Inglis, Tahsin M. Kurç, Rajarsi Gupta, Erich Bremer, Peter Bankhead, Joel H. Saltz
2023 A* conf
CVPR
Shahira Abousamra, Rajarsi Gupta, Tahsin M. Kurç, Dimitris Samaras, Joel H. Saltz, Chao Chen
2023 J jnl
CoRR
Shahira Abousamra, Rajarsi Gupta, Tahsin M. Kurç, Dimitris Samaras, Joel H. Saltz, Chao Chen
2023 conf
DGM4MICCAI
Xuan Xu, Saarthak Kapse, Rajarsi Gupta, Prateek Prasanna
2023 J jnl
CoRR
Xuan Xu, Saarthak Kapse, Rajarsi Gupta, Prateek Prasanna
2022 J jnl
CoRR
Rajarsi Gupta, Jakub Kaczmarzyk, Soma Kobayashi, Tahsin M. Kurç, Joel H. Saltz
2022 J jnl
CoRR
Jakub R. Kaczmarzyk, Tahsin M. Kurç, Shahira Abousamra, Rajarsi Gupta, Joel H. Saltz, Peter K. Koo
2022 J jnl
CoRR
Ujjwal Baid, Sarthak Pati, Tahsin M. Kurç, Rajarsi Gupta, Erich Bremer, Shahira Abousamra, Siddhesh P. Thakur, Joel H. Saltz, Spyridon Bakas
2022 conf
MICCAI (2)
Jingwei Zhang, Xin Zhang, Ke Ma, Rajarsi Gupta, Joel H. Saltz, Maria Vakalopoulou, Dimitris Samaras
2022 J jnl
CoRR
Jingwei Zhang, Xin Zhang, Ke Ma, Rajarsi Gupta, Joel H. Saltz, Maria Vakalopoulou, Dimitris Samaras
2022 conf
MOVI@MICCAI
Souradeep Chakraborty, Rajarsi Gupta, Ke Ma, Darshana Govind, Pinaki Sarder, Won-Tak Choi, Waqas Mahmud, Eric Yee, Felicia Allard, Beatrice Knudsen, Gregory J. Zelinsky, Joel H. Saltz, Dimitris Samaras
2022 conf
Digital and Computational Pathology
Saarthak Kapse, Rajarsi Gupta, Prateek Prasanna
2022 conf
ISBI
Saarthak Kapse, Luke Torre-Healy, Richard A. Moffitt, Rajarsi Gupta, Prateek Prasanna
2022 conf
ISBI
Souradeep Chakraborty, Ke Ma, Rajarsi Gupta, Beatrice Knudsen, Gregory J. Zelinsky, Joel H. Saltz, Dimitris Samaras
2022 J jnl
CoRR
Souradeep Chakraborty, Ke Ma, Rajarsi Gupta, Beatrice Knudsen, Gregory J. Zelinsky, Joel H. Saltz, Dimitris Samaras
2021 conf
CVPR Workshops
Jingwei Zhang, Ke Ma, John S. Van Arnam, Rajarsi Gupta, Joel H. Saltz, Maria Vakalopoulou, Dimitris Samaras
2021 A* conf
ICCV
Shahira Abousamra, David Belinsky, John S. Van Arnam, Felicia Allard, Eric Yee, Rajarsi Gupta, Tahsin M. Kurç, Dimitris Samaras, Joel H. Saltz, Chao Chen
2021 J jnl
CoRR
Shahira Abousamra, David Belinsky, John S. Van Arnam, Felicia Allard, Eric Yee, Rajarsi Gupta, Tahsin M. Kurç, Dimitris Samaras, Joel H. Saltz, Chao Chen
2020 conf
ECCV Workshops (1)
David Paredes, Prateek Prasanna, Christina Preece, Rajarsi Gupta, Farzad Fereidouni, Dimitris Samaras, Tahsin M. Kurç, Richard M. Levenson, Patricia Thompson-Carino, Joel H. Saltz, Chao Chen
2020 J jnl
CoRR
Le Hou, Rajarsi Gupta, John S. Van Arnam, Yuwei Zhang, Kaustubh Sivalenka, Dimitris Samaras, Tahsin M. Kurç, Joel H. Saltz
2020 conf
ISBI
Shahira Abousamra, Danielle Fassler, Le Hou, Yuwei Zhang, Rajarsi Gupta, Tahsin M. Kurç, Luisa F. Escobar-Hoyos, Dimitris Samaras, Beatrice Knudson, Kenneth Shroyer, Joel H. Saltz, Chao Chen
2019 conf
CARLA
Paola A. Buitrago, Nicholas A. Nystrom, Rajarsi Gupta, Joel H. Saltz
2019 conf
BrainLes@MICCAI (2)
Tahsin M. Kurç, Ashish Sharma, Rajarsi Gupta, Le Hou, Han Le, Shahira Abousamra, Erich Bremer, Ryan Birmingham, Tammy DiPrima, Nan Li, Feiqiao Wang, Joseph Balsamo, Whitney Bremer, Dimitris Samaras, Joel H. Saltz
2019 conf
MICCAI (1)
Han Le, Dimitris Samaras, Tahsin M. Kurç, Rajarsi Gupta, Kenneth Shroyer, Joel H. Saltz
redb/extractors/decompiler/bninja/analysis/disassembly.py
← Index redb/extractors/decompiler/bninja/analysis/disassembly.py python
import re
import time

import binaryninja
from binaryninja.enums import (
    InstructionTextTokenType,
)

# Support both package and standalone imports
try:
    from ..function_type import FunctionTypeAnalysis
    from ..utils.hashes import calculate_sha256
except ImportError:
    # Fallback to absolute imports (for multiprocessing spawned processes)
    from redb.extractors.decompiler.bninja.function_type import FunctionTypeAnalysis
    from redb.extractors.decompiler.bninja.utils.hashes import calculate_sha256


class DisassemblyAnalysis:
    INVALID_STACK_SIZE = -1

    def __init__(self, arch, function, bv, logger):
        self.arch = arch
        self.function = function
        self.bv = bv
        self.logger = logger
        if self.function is not None and hasattr(self.function, "instructions"):
            self.instructions = self.function.instructions
        else:
            self.instructions = []
        self.errors = []
        return

    def log_error(
        self, message, function_name, address, exception=None, error_location="unknown"
    ):
        """Log an error during processing."""
        error_msg = f"Error in function {function_name} at {address}: {message}"
        if exception:
            error_msg += f" - {str(exception)}"
        self.logger.error(error_msg)

        # Add to errors list
        error = {
            "function_name": function_name,
            "function_address": str(address),
            "error_location": error_location,
            "error_message": message,
            "error_details": str(exception) if exception else "",
            "error_type": type(exception).__name__ if exception else "Unknown",
            "timestamp": int(time.time() * 1000),
        }
        self.errors.append(error)

    def get_json(self):
        try:
            # Build disassembly string and normalized versions
            disassembly_builder = [[], []]  # Address and instruction text

            # Create a dictionary mapping addresses to instruction tokens
            instr_tokens_by_addr = {}
            for instr_tokens, addr in self.instructions:
                instr_tokens_by_addr[addr] = instr_tokens

            addresses = sorted(instr_tokens_by_addr.keys())
            for address in addresses:
                # Original disassembly with addresses
                # instr_tokens, address = instruction
                instr_tokens = instr_tokens_by_addr[address]
                disassembly_builder[0].append(address)
                disassembly_builder[1].append("".join(map(str, instr_tokens)))

            # Join with newlines
            disassembly_str = "\n".join(disassembly_builder[1])
            disassembly_with_addresses = "\n".join(
                f"{hex(address)}: {instr_text}"
                for address, instr_text in zip(
                    disassembly_builder[0], disassembly_builder[1], strict=False
                )
            )

            disassembly_json = {
                "disassembled_function_hash": calculate_sha256(disassembly_str),
                "disassembled_function": disassembly_with_addresses,
                "disassembled_function_no_addresses": disassembly_str,
                "disassembled_function_name": self.function.name,
                "disassembled_function_address": self.function.start,
                "instructions_count": len(instr_tokens_by_addr.keys()),
                "function_type": FunctionTypeAnalysis(self.function)
                .get_function_type()
                .name,
            }

            # Add additional metrics
            type_frequencies = self.collect_instruction_types()
            disassembly_json["instructions_types"] = list(type_frequencies.keys())
            disassembly_json["control_flow_count"] = (
                self.count_control_flow_instructions()
            )
            disassembly_json["memory_access_pattern"] = self.collect_memory_patterns()
            disassembly_json["register_usage"] = self.collect_register_usage()
            disassembly_json["data_references_count"] = self.count_data_references()
            disassembly_json["max_block_size"] = self.compute_max_block_size()
            disassembly_json["num_calls"] = self.compute_num_calls()
            disassembly_json["stack_size"] = self.estimate_stack_size()

            return disassembly_json, self.errors

        except Exception as e:
            self.log_error(
                "Failed to collect instruction types",
                self.function.name,
                self.function.start,
                e,
                "collect_instruction_types",
            )
            raise ValueError(e) from e

    def collect_instruction_types(self):
        """Collect instruction type frequencies from a function."""
        type_frequencies = {}

        try:
            # Iterate through all instructions in the function
            for instruction in self.instructions:
                instr_tokens = instruction[0]  # Get the instruction tokens

                # Extract the mnemonic from the instruction tokens
                mnemonic = None
                for token in instr_tokens:
                    if token.type == InstructionTextTokenType.InstructionToken:
                        mnemonic = token.text
                        break

                if not mnemonic:
                    continue

                # Use normalize_opcode to get standardized opcode
                normalized = self.normalize_opcode(mnemonic)

                # Get category from opcode_categories or use the instruction type directly
                category = self.arch.opcode_categories.get(normalized)
                if category:
                    self._increment_frequency(type_frequencies, category)

        except Exception as e:
            self.log_error(
                "Failed to collect instruction types",
                self.function.name,
                self.function.start,
                e,
                "collect_instruction_types",
            )

        return type_frequencies

    def normalize_opcode(self, opcode):
        return opcode.upper()

    def collect_memory_patterns(self):
        """Collect memory access patterns from a function."""
        patterns = []
        try:
            for instruction in self.instructions:
                instr_tokens = instruction[0]

                # We need to capture memory operands between BeginMemoryOperandToken and EndMemoryOperandToken
                in_memory_operand = False
                memory_operand_text = ""

                for token in instr_tokens:
                    if token.type == InstructionTextTokenType.BeginMemoryOperandToken:
                        in_memory_operand = True
                        memory_operand_text = ""
                    elif token.type == InstructionTextTokenType.EndMemoryOperandToken:
                        in_memory_operand = False

                        # Process the captured memory operand text
                        if memory_operand_text:
                            # Categorize memory access pattern
                            if (
                                "+" in memory_operand_text
                                and "*" in memory_operand_text
                            ):
                                if "MEM_SCALED_INDEX" not in patterns:
                                    patterns.append("MEM_SCALED_INDEX")
                            elif (
                                "+" in memory_operand_text or "-" in memory_operand_text
                            ):
                                if "MEM_BASE_OFFSET" not in patterns:
                                    patterns.append("MEM_BASE_OFFSET")
                            else:
                                if "MEM_DIRECT" not in patterns:
                                    patterns.append("MEM_DIRECT")

                            # Check for stack accesses
                            if any(
                                reg in memory_operand_text
                                for reg in ["SP", "BP", "ESP", "EBP", "RSP", "RBP"]
                            ):
                                if "MEM_STACK" not in patterns:
                                    patterns.append("MEM_STACK")
                            # Check for string operations
                            elif (
                                any(
                                    reg in memory_operand_text
                                    for reg in ["SI", "DI", "ESI", "EDI", "RSI", "RDI"]
                                )
                                and "MEM_STRING" not in patterns
                            ):
                                patterns.append("MEM_STRING")
                    elif in_memory_operand:
                        # Accumulate token text while inside a memory operand
                        memory_operand_text += token.text
        except Exception as e:
            self.log_error(
                "Failed to collect memory patterns",
                self.function.name,
                self.function.start,
                e,
                "collect_memory_patterns",
            )
        return patterns

    def collect_register_usage(self):
        """Collect register usage from a function."""
        registers = []
        try:
            # Define register groups we're interested in tracking
            register_groups = {
                "GPR": [
                    "RAX",
                    "RBX",
                    "RCX",
                    "RDX",
                    "R9",
                    "R10",
                    "R11",
                    "R12",
                    "R13",
                    "R14",
                    "R15",
                    "EAX",
                    "EBX",
                    "ECX",
                    "EDX",
                    "R9D",
                    "R10D",
                    "R11D",
                    "R12D",
                    "R13D",
                    "R14D",
                    "AX",
                    "BX",
                    "CX",
                    "DX",
                ],
                "GPR_INDEX": ["RSI", "RDI", "ESI", "EDI", "SI", "DI"],
                "GPR_STACK": ["RSP", "RBP", "ESP", "EBP", "SP", "BP"],
                "SIMD": ["XMM", "YMM", "ZMM"],
                "FPU": ["ST", "ST0", "ST1", "ST2", "ST3", "ST4", "ST5", "ST6", "ST7"],
                "FLAGS": ["FLAGS", "EFLAGS", "RFLAGS"],
                "CONTROL_REGISTER": ["CR0", "CR2", "CR3", "CR4", "CR8"],
                "DEBUG_REGISTER": ["DR0", "DR1", "DR2", "DR3", "DR6", "DR7"],
            }

            # Extract registers from instructions
            for instruction in self.instructions:
                instr_tokens = instruction[0]
                for token in instr_tokens:
                    if token.type == InstructionTextTokenType.RegisterToken:
                        reg = token.text.upper()
                        # Check which group this register belongs to
                        for group, regs in register_groups.items():
                            # if any(r in reg for r in regs) or any(reg.startswith(r) for r in regs):
                            if any(reg == r or reg.startswith(r) for r in regs):
                                if group not in registers:
                                    registers.append(group)
                                break
        except Exception as e:
            self.log_error(
                "Failed to collect register usage",
                self.function.name,
                self.function.start,
                e,
                "collect_register_usage",
            )
        return registers

    def count_data_references(self):
        """Count the number of data references in a function."""
        count = 0
        try:

            if self.function.mlil is None:
                return 0

            for block in self.function.mlil:
                for instr in block:
                    instr_str = str(instr)
                    logged = False
                    src = None

                    # Check for constant dereferencing or symbolic refs
                    if hasattr(instr, "src"):
                        src = instr.src
                        if isinstance(
                            src,
                            (
                                binaryninja.mediumlevelil.MediumLevelILConstPtr,
                                binaryninja.mediumlevelil.MediumLevelILConst,
                            ),
                        ):
                            count += 1
                            logged = True

                    # Check full string for hardcoded addresses or symbol-like tokens
                    if re.search(r"\b0x[0-9A-Fa-f]{3,}\b", instr_str) and not logged:
                        count += 1
                        logged = True

                    if "_" in instr_str and not logged:
                        count += 1
                        logged = True

                    # Only check for MediumLevelILConstPtr if src exists
                    if src is not None and isinstance(
                        src, binaryninja.mediumlevelil.MediumLevelILConstPtr
                    ):
                        addr = src.constant
                        # Check if address is in data sections
                        segment = self.bv.get_segment_at(addr)
                        if segment and segment.writable:
                            # print(f"[{function.name}] Matched data section reference in: {instr_str}")
                            count += 1
                            logged = True
        except Exception as e:
            self.logger.warning(
                f"Failed to use MLIL for counting data references in {self.function.name} at {self.function.start}: {e}"
            )
        return count

    def compute_max_block_size(self):
        """Compute the maximum basic block size in a function."""
        max_size = 0
        if self.function is None:
            return 0

        for block in self.function.basic_blocks:
            try:
                # Count instructions in this block using the direct length approach
                # This avoids UTF-8 decoding issues entirely
                block_size = block.instruction_count
                max_size = max(max_size, block_size)
            except Exception as e:
                self.log_error(
                    f"[HandledError] computing max block size: {e}",
                    self.function.name,
                    self.function.start,
                    e,
                    "compute_max_block_size",
                )
        return max_size

    def count_control_flow_instructions(self):
        """Count the number of control flow instructions in a function."""
        count = 0
        try:
            for instruction in self.instructions:
                instr_tokens = instruction[0]
                if self.arch.is_control_flow_instruction(instr_tokens):
                    count += 1
        except Exception as e:
            self.log_error(
                "Failed to count control flow instructions",
                self.function.name,
                self.function.start,
                e,
                "count_control_flow_instructions",
            )
        return count

    def compute_num_calls(self) -> int:
        """Compute the number of call instructions in a function."""
        num_calls = 0
        try:
            for instruction in self.instructions:
                instr_tokens = instruction[0]
                # Extract the mnemonic
                for token in instr_tokens:
                    if token.type == InstructionTextTokenType.InstructionToken:
                        if token.text.upper() == "CALL":
                            num_calls += 1
                        break
        except Exception as e:
            self.log_error(
                "Failed to compute number of calls",
                self.function.name,
                self.function.start,
                e,
                "compute_num_calls",
            )
        return num_calls

    def _increment_frequency(self, frequencies, type_name):
        """Increment the frequency count for an instruction type."""
        if type_name in frequencies:
            frequencies[type_name] += 1
        else:
            frequencies[type_name] = 1

    def estimate_stack_size(self):
        """Estimate the stack size used by a function."""
        try:
            # Binary Ninja provides a stack adjustment value for functions
            # Need to convert OffsetWithConfidence to a plain integer
            stack_adjust = self.function.stack_adjustment
            if hasattr(stack_adjust, "value"):  # Handle OffsetWithConfidence objects
                return stack_adjust.value
            return stack_adjust
        except Exception as e:
            self.log_error(
                "Failed to estimate stack size",
                self.function.name,
                self.function.start,
                e,
                "estimate_stack_size",
            )
            return self.INVALID_STACK_SIZE