Rajanikanth Vadigepalli

17 papers C 1Journal 16

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Tumor microenvironment governs the prognostic landscape of immunotherapy for head and neck squamous cell carcinoma: A computational model-guided analysis. PLoS Comput. Biol. Priyan Bhattacharya, Alban Linnenbach, Andrew P. South, Ubaldo Martinez-Outschoorn, Joseph M. Curry, Jennifer M. Johnson, Larry A. Harshyne, My G. Mahoney, Adam J. Luginbuhl, Rajanikanth Vadigepalli
2019	J	`jnl`	Model-based virtual patient analysis of human liver regeneration predicts critical perioperative factors controlling the dynamic mode of response to resection. BMC Syst. Biol. Babita K. Verma, Pushpavanam Subramaniam, Rajanikanth Vadigepalli
2018	J	`jnl`	Cellular network modeling and single cell gene expression analysis reveals novel hepatic stellate cell phenotypes controlling liver regeneration dynamics. BMC Syst. Biol. Daniel Cook, Sirisha Achanta, Jan B. Hoek, Babatunde A. Ogunnaike, Rajanikanth Vadigepalli
2018	J	`jnl`	Credibility, Replicability, and Reproducibility in Simulation for Biomedicine and Clinical Applications in Neuroscience. Frontiers Neuroinformatics Lealem Mulugeta, Andrew Drach, Ahmet Erdemir, C. Anthony Hunt, Marc Horner, Joy P. Ku, Jerry G. Myers Jr., Rajanikanth Vadigepalli, William W. Lytton
2018	J	`jnl`	SPSNet: subpopulation-sensitive network-based analysis of heterogeneous gene expression data. BMC Syst. Biol. Abha Belorkar, Rajanikanth Vadigepalli, Limsoon Wong
2017	J	`jnl`	A data-driven modeling approach to identify disease-specific multi-organ networks driving physiological dysregulation. PLoS Comput. Biol. Warren D. Anderson, Danielle DeCicco, James S. Schwaber, Rajanikanth Vadigepalli
2016	J	`jnl`	Computational Modeling of Spatiotemporal Ca IEEE Trans. Biomed. Eng. Aalap Verma, Hirenkumar K. Makadia, Jan B. Hoek, Babatunde A. Ogunnaike, Rajanikanth Vadigepalli
2016	J	`jnl`	Erratum to: Molecular variability elicits a tunable switch with discrete neuromodulatory response phenotypes. J. Comput. Neurosci. Warren D. Anderson, Hirenkumar K. Makadia, Rajanikanth Vadigepalli
2016	J	`jnl`	Molecular variability elicits a tunable switch with discrete neuromodulatory response phenotypes. J. Comput. Neurosci. Warren D. Anderson, Hirenkumar K. Makadia, Rajanikanth Vadigepalli
2015	J	`jnl`	Intracellular Information Processing through Encoding and Decoding of Dynamic Signaling Features. PLoS Comput. Biol. Hirenkumar K. Makadia, James S. Schwaber, Rajanikanth Vadigepalli
2015	J	`jnl`	Systems analysis of non-parenchymal cell modulation of liver repair across multiple regeneration modes. BMC Syst. Biol. Daniel Cook, Babatunde A. Ogunnaike, Rajanikanth Vadigepalli
2010	C	`conf`	Ethanol Effects on Transcription Factor Network Regulating Stem Cell Differentiation. BIBE Rajanikanth Vadigepalli, Joshua Ogony, Helen Anni
2010	J	`jnl`	Robust dynamic balance of AP-1 transcription factors in a neuronal gene regulatory network. BMC Syst. Biol. Gregory M. Miller, Babatunde A. Ogunnaike, James S. Schwaber, Rajanikanth Vadigepalli
2009	J	`jnl`	Structural Properties of Gene Regulatory Networks: Definitions and Connections. IEEE ACM Trans. Comput. Biol. Bioinform. Sridharakumar Narasimhan, Raghunathan Rengaswamy, Rajanikanth Vadigepalli
2005	J	`jnl`	Unconventional systems analysis problems in molecular biology: a case study in gene regulatory network modeling. Comput. Chem. Eng. Daniel E. Zak, Rajanikanth Vadigepalli, Gregory E. Gonye, Francis J. Doyle III, James S. Schwaber, Babatunde A. Ogunnaike
2003	J	`jnl`	A distributed state estimation and control algorithm for plantwide processes. IEEE Trans. Control. Syst. Technol. Rajanikanth Vadigepalli, Francis J. Doyle III
2001	J	`jnl`	Analysis and Neuronal Modeling of the Nonlinear Characteristics of a Local Cardiac Reflex in the Rat. Neural Comput. Rajanikanth Vadigepalli, Francis J. Doyle III, James S. Schwaber