Radek Erban

25 papers Journal 25
YearRankTypeTitle / Venue / Authors
2025 J jnl
On the role of fractional Brownian motion in models of chemotaxis and stochastic gradient ascent.
CoRR
Gustavo Cornejo-Olea, Lucas Buvinic, Jérôme Darbon, Radek Erban, Andrea Ravasio, Anastasios Matzavinos
2024 J jnl
Guest Editorial Special Feature on Seeing Through the Crowd: Molecular Communication in Crowded and Multi-Cellular Environments.
IEEE Trans. Mol. Biol. Multi Scale Commun.
Adam Noel, Andrew W. Eckford, Radek Erban, Matteo Icardi, Gregory T. Reeves
2017 J jnl
ADM-CLE Approach for Detecting Slow Variables in Continuous Time Markov Chains and Dynamic Data.
SIAM J. Sci. Comput.
Mihai Cucuringu, Radek Erban
2017 J jnl
Varying the Resolution of the Rouse Model on Temporal and Spatial Scales: Application to Multiscale Modeling of DNA Dynamics.
Multiscale Model. Simul.
Edward Rolls, Yuichi Togashi, Radek Erban
2016 J jnl
A Cucker-Smale Model with Noise and Delay.
SIAM J. Appl. Math.
Radek Erban, Jan Haskovec, Yongzheng Sun
2016 J jnl
Error Analysis of Diffusion Approximation Methods for Multiscale Systems in Reaction Kinetics.
SIAM J. Sci. Comput.
Simon L. Cotter, Radek Erban
2016 J jnl
Hybrid framework for the simulation of stochastic chemical kinetics.
J. Comput. Phys.
Andrew B. Duncan, Radek Erban, Konstantinos C. Zygalakis
2016 J jnl
Particle-Based Multiscale Modeling of Calcium Puff Dynamics.
Multiscale Model. Simul.
Ulrich Dobramysl, Sten Rüdiger, Radek Erban
2016 J jnl
Reactive Boundary Conditions as Limits of Interaction Potentials for Brownian and Langevin Dynamics.
SIAM J. Appl. Math.
S. Jonathan Chapman, Radek Erban, Samuel A. Isaacson
2015 J jnl
ADM-CLE approach for detecting slow variables in continuous time Markov chains and dynamic data.
CoRR
Mihai Cucuringu, Radek Erban
2015 J jnl
Convergence of methods for coupling of microscopic and mesoscopic reaction-diffusion simulations.
J. Comput. Phys.
Mark B. Flegg, Stefan Hellander, Radek Erban
2015 J jnl
Multiscale reaction-diffusion simulations with Smoldyn.
Bioinform.
Martin Robinson, Steven S. Andrews, Radek Erban
2014 J jnl
Analysis of the Two-Regime Method on Square Meshes.
SIAM J. Sci. Comput.
Mark B. Flegg, S. Jonathan Chapman, Likun Zheng, Radek Erban
2014 J jnl
From Brownian Dynamics to Markov Chain: An Ion Channel Example.
SIAM J. Appl. Math.
Wan Chen, Radek Erban, S. Jonathan Chapman
2014 J jnl
Mathematical Modelling of Turning Delays in Swarm Robotics.
CoRR
Jake P. Taylor-King, Benjamin Franz, Christian A. Yates, Radek Erban
2013 J jnl
Adaptive Finite Element Method Assisted by Stochastic Simulation of Chemical Systems.
SIAM J. Sci. Comput.
Simon L. Cotter, Tomás Vejchodský, Radek Erban
2013 J jnl
Multiscale Reaction-Diffusion Algorithms: PDE-Assisted Brownian Dynamics.
SIAM J. Appl. Math.
Benjamin Franz, Mark B. Flegg, S. Jonathan Chapman, Radek Erban
2012 J jnl
A higher-order numerical framework for stochastic simulation of chemical reaction systems.
BMC Syst. Biol.
Tamás Székely, Kevin Burrage, Radek Erban, Konstantinos C. Zygalakis
2012 J jnl
Fat versus Thin Threading Approach on GPUs: Application to Stochastic Simulation of Chemical Reactions.
IEEE Trans. Parallel Distributed Syst.
Guido Klingbeil, Radek Erban, Mike B. Giles, Philip K. Maini
2011 J jnl
Analysis of Brownian Dynamics Simulations of Reversible Bimolecular Reactions.
SIAM J. Appl. Math.
Jana Lipková, Konstantinos C. Zygalakis, S. Jonathan Chapman, Radek Erban
2011 J jnl
STOCHSIMGPU: parallel stochastic simulation for the Systems Biology Toolbox 2 for MATLAB.
Bioinform.
Guido Klingbeil, Radek Erban, Mike B. Giles, Philip K. Maini
2009 J jnl
Analysis of a Stochastic Chemical System Close to a SNIPER Bifurcation of Its Mean-Field Model.
SIAM J. Appl. Math.
Radek Erban, S. Jonathan Chapman, Ioannis G. Kevrekidis, Tomás Vejchodský
2007 J jnl
Projective and coarse projective integration for problems with continuous symmetries.
J. Comput. Phys.
Michail E. Kavousanakis, Radek Erban, Andreas G. Boudouvis, C. William Gear, Ioannis G. Kevrekidis
2005 J jnl
From Signal Transduction to Spatial Pattern Formation in
Multiscale Model. Simul.
Radek Erban, Hans G. Othmer
2004 J jnl
From Individual to Collective Behavior in Bacterial Chemotaxis.
SIAM J. Appl. Math.
Radek Erban, Hans G. Othmer