R. Stuart Geiger

40 papers A* 1A 3C 1Journal 23Unranked 12
YearRankTypeTitle / Venue / Authors
2024 J jnl
CoRR
R. Stuart Geiger, Flynn O'Sullivan, Elsie Wang, Jonathan Lo
2022 J jnl
Cogn. Sci.
Alexandra Paxton, Nelle Varoquaux, Chris Holdgraf, R. Stuart Geiger
2021 J jnl
CoRR
R. Stuart Geiger, Dominique Cope, Jamie Ip, Marsha Lotosh, Aayush Shah, Jenny Weng, Rebekah Tang
2021 J jnl
Quant. Sci. Stud.
R. Stuart Geiger, Dominique Cope, Jamie Ip, Marsha Lotosh, Aayush Shah, Jenny Weng, Rebekah Tang
2021 J jnl
Proc. ACM Hum. Comput. Interact.
R. Stuart Geiger, Dorothy Howard, Lilly Irani
2020 conf
FAT*
R. Stuart Geiger, Kevin Yu, Yanlai Yang, Mindy Dai, Jie Qiu, Rebekah Tang, Jenny Huang
2020 conf
GROUP (Companion)
Marina Kogan, Aaron Halfaker, Shion Guha, Cecilia M. Aragon, Michael J. Muller, R. Stuart Geiger
2020 J jnl
Proc. ACM Hum. Comput. Interact.
Aaron Halfaker, R. Stuart Geiger
2020 J jnl
Commun. ACM
Michael Scroggins, Irene V. Pasquetto, R. Stuart Geiger, Bernadette M. Boscoe, Peter T. Darch, Charlotte Cabasse-Mazel, Cheryl A. Thompson, Milena S. Golshan, Christine L. Borgman
2019 J jnl
CoRR
R. Stuart Geiger, Yoon Jung Jeong, Emily Manders
2019 J jnl
CoRR
R. Stuart Geiger, Kevin Yu, Yanlai Yang, Mindy Dai, Jie Qiu, Rebekah Tang, Jenny Huang
2019 J jnl
CoRR
Aaron Halfaker, R. Stuart Geiger
2019 J jnl
CoRR
R. Stuart Geiger
2019 J jnl
Proc. ACM Hum. Comput. Interact.
R. Stuart Geiger
2018 J jnl
CoRR
R. Stuart Geiger, Aaron Halfaker
2018 J jnl
CoRR
R. Stuart Geiger
2018 J jnl
Comput. Support. Cooperative Work.
R. Stuart Geiger, Nelle Varoquaux, Charlotte Mazel-Cabasse, Chris Holdgraf
2018 J jnl
CoRR
R. Stuart Geiger, Nelle Varoquaux, Charlotte Mazel-Cabasse, Chris Holdgraf
2017 J jnl
Big Data Soc.
R. Stuart Geiger
2017 J jnl
CoRR
R. Stuart Geiger
2017 conf
CSCW Companion
Anna Filippova, Brad Chapman, R. Stuart Geiger, James D. Herbsleb, Arun Kalyanasundaram, Erik H. Trainer, Aurelia Moser, Arlin Stoltzfus
2017 J jnl
Proc. ACM Hum. Comput. Interact.
R. Stuart Geiger, Aaron Halfaker
2017 J jnl
CoRR
Daniel S. Katz, Kyle E. Niemeyer, Sandra Gesing, Lorraine J. Hwang, Wolfgang Bangerth, Simon Hettrick, Ray Idaszak, Jean Salac, Neil P. Chue Hong, Santiago Núñez-Corrales, Alice Allen, R. Stuart Geiger, Jonah Miller, Emily Chen, Anshu Dubey, Patricia Lago
2017 J jnl
CoRR
R. Stuart Geiger
2014 A* conf
CHI
Aaron Halfaker, R. Stuart Geiger, Loren G. Terveen
2013 conf
CSCW Companion
R. Stuart Geiger
2013 J jnl
Inf. Organ.
David Ribes, Steven J. Jackson, R. Stuart Geiger, Matthew Burton, Thomas A. Finholt
2013 conf
CSCW Companion
Aaron Halfaker, R. Stuart Geiger, Cliff Lampe, Loren G. Terveen, Amy S. Bruckman, Brian Keegan, Aniket Kittur, Geraldine Fitzpatrick
2013 A conf
CSCW
R. Stuart Geiger, Aaron Halfaker
2013 C conf
OpenSym
R. Stuart Geiger, Aaron Halfaker
2012 conf
WikiSym
Heather Ford, R. Stuart Geiger
2012 conf
CHI Extended Abstracts
R. Stuart Geiger, Yoon Jung Jeong, Emily Manders
2012 J jnl
Tiny Trans. Comput. Sci.
R. Stuart Geiger
2012 A conf
ICWSM
R. Stuart Geiger, Aaron Halfaker, Maryana Pinchuk, Steven Walling
2012 conf
CHI Extended Abstracts
Michael S. Bernstein, Michael D. Conover, Benjamin Mako Hill, Andrés Monroy-Hernández, Brian Keegan, Aaron D. Shaw, Sarita Yardi, R. Stuart Geiger, Amy S. Bruckman
2012 conf
WikiSym
Aaron Halfaker, Brian Keegan, Andrea Forte, R. Stuart Geiger, Dario Taraborelli, Maryana Pinchuk, Mikhil Masli
2011 conf
Int. Sym. Wikis
R. Stuart Geiger, Heather Ford
2011 conf
HICSS
R. Stuart Geiger, David Ribes
2010 A conf
CSCW
R. Stuart Geiger, David Ribes
2009 conf
Int. Sym. Wikis
R. Stuart Geiger
redb/extractors/decompiler/DecompileAPK.py
← Index redb/extractors/decompiler/DecompileAPK.py python
"""APK Code Analysis Extractor.

Decompiles and disassembles APK DEX bytecode at the method level,
producing per-method content and reference records analogous to
the Binary Ninja code_binja_* tables.

Uses androguard + JADX + apktool to replicate Binary Ninja analysis
depth for Android applications.
"""

import gc
import hashlib
import inspect
import logging
import os
import threading
import time
from datetime import datetime, timezone
from typing import Any, Dict, Optional

from redb.extractors.decompiler.apk.analyzer import APKCodeAnalyzer
from redb.extractors.enum import Tag
from redb.extractors.extractor import Extractor


class DecompileAPK(Extractor):
    """APK code analysis extractor — produces multi-table ClickHouse export.

    Follows the same pattern as DecompileBinja for consistency.
    """

    def __init__(
        self,
        filepath,
        log,
        exporters=None,
        index_prefix=None,
        known_benign=False,
        known_malicious=False,
        filetype=None,
        decompile_modules=None,
    ):
        super().__init__(
            filepath,
            log,
            exporters,
            index_prefix,
            known_benign=known_benign,
            known_malicious=known_malicious,
        )
        self.log.debug(inspect.currentframe().f_code.co_name)
        self.analysis_results = None
        self.analyzer = None
        self.filetype = filetype or "apk"
        self.decompile_modules = decompile_modules or {"all"}

        try:
            self.APK_DECOMPILE_TIMEOUT = int(
                os.getenv("APK_DECOMPILE_TIMEOUT", "600")
            )
        except ValueError:
            self.log.warning(
                "Invalid APK_DECOMPILE_TIMEOUT value, using default of 600 seconds"
            )
            self.APK_DECOMPILE_TIMEOUT = 600

    def __enter__(self):
        return self

    def __exit__(self, exc_type, exc_val, exc_tb):
        self.cleanup_run()

    def calculate_md5(self, input_str):
        """Calculate MD5 hash of a string."""
        return hashlib.md5(input_str.encode("utf-8")).hexdigest()

    def cleanup_run(self):
        """Clean up after analysis."""
        try:
            if self.analyzer:
                self.analyzer.cleanup()
                self.analyzer = None
            gc.collect()
        except Exception as e:
            self.log.error(f"Error in cleanup: {e}")

    def analyze_apk(self) -> Optional[Dict[str, Any]]:
        """Run APK code analysis and return results."""
        self.log.debug("Starting APK code analysis")
        try:
            self.analyzer = APKCodeAnalyzer(
                filepath=self.filepath,
                timeout=self.APK_DECOMPILE_TIMEOUT,
                log=self.log,
                decompile_modules=self.decompile_modules,
            )
            results = self.analyzer.extract()
            return results
        except Exception as e:
            self.log.error(f"Error in APK code analysis: {e}")
            import traceback
            self.log.error(f"Traceback: {traceback.format_exc()}")
            return None
        finally:
            self.cleanup_run()

    def extract(self):
        """Extract and process all analysis results.

        Uses daemon thread with timeout, same pattern as DecompileBinja.
        """
        self.log.debug(inspect.currentframe().f_code.co_name)

        extraction_completed = False
        extraction_result = False
        extraction_error = None

        def do_extraction():
            nonlocal extraction_completed, extraction_result, extraction_error
            try:
                results = self.analyze_apk()
                if not results:
                    extraction_result = False
                else:
                    self.analysis_results = results
                    self.analysis_results["sha256"] = self.sha256
                    self.analysis_results["sha1"] = self.sha1
                    self.analysis_results["md5"] = self.md5
                    extraction_result = True
            except Exception as e:
                extraction_error = e
                extraction_result = False
            finally:
                extraction_completed = True

        extraction_thread = threading.Thread(target=do_extraction)
        extraction_thread.daemon = True
        extraction_thread.start()

        start_time = time.time()
        while (
            not extraction_completed
            and (time.time() - start_time) < self.APK_DECOMPILE_TIMEOUT
        ):
            time.sleep(1)

        if not extraction_completed:
            self.log.error(
                f"APK extraction timed out after {self.APK_DECOMPILE_TIMEOUT} seconds"
            )
            self.cleanup_run()
            return None

        if extraction_error:
            self.log.error(f"Error in APK extraction: {extraction_error}")
            return None

        return self.analysis_results if extraction_result else None

    def prepare_export_data(self, exporter_type: str) -> Any:
        """Prepare data for database export."""
        self.log.debug(inspect.currentframe().f_code.co_name)
        if not self.analysis_results:
            return None

        if exporter_type == "ClickHouseExporter":
            now = datetime.now(timezone.utc)
            export = {"multi_table": True}

            # Table 1: Decompiled method content
            if self.analysis_results.get("decompiled_content"):
                export["decompiled_content"] = {
                    "table": "code_apk_decompiled_methods_content",
                    "data": [
                        [
                            f["decompiled_method_hash"],
                            f["decompiled_method"],
                            f.get("decompiled_method_type", "UNKNOWN"),
                            1 if f.get("decompiled_has_string_encryption") else 0,
                            1 if f.get("decompiled_has_reflection_calls") else 0,
                            1 if f.get("decompiled_excessive_goto_count") else 0,
                            now,
                        ]
                        for f in self.analysis_results["decompiled_content"]
                    ],
                    "column_names": [
                        "decompiled_method_hash",
                        "decompiled_method",
                        "decompiled_method_type",
                        "decompiled_has_string_encryption",
                        "decompiled_has_reflection_calls",
                        "decompiled_excessive_goto_count",
                        "analysis_date",
                    ],
                    "column_type_names": [
                        "FixedString(64)",
                        "String",
                        "Enum8('USER'=1, 'LIBRARY'=2, 'UNKNOWN'=5)",
                        "UInt8",
                        "UInt8",
                        "UInt8",
                        "DateTime64(3, 'UTC')",
                    ],
                }

            # Table 2: Decompiled method references
            if self.analysis_results.get("decompiled_refs"):
                export["decompiled_refs"] = {
                    "table": "code_apk_decompiled_methods_references",
                    "data": [
                        [
                            self.analysis_results["sha256"],
                            f["decompiled_method_hash"],
                            f.get("smali_method_hash"),
                            f.get("decompiled_class_name", ""),
                            f.get("decompiled_method_name", ""),
                            f.get("decompiled_method_signature", ""),
                            f.get("decompiled_method_prototype", ""),
                            f.get("functions_caller", []),
                            f.get("functions_call", []),
                            now,
                        ]
                        for f in self.analysis_results["decompiled_refs"]
                    ],
                    "column_names": [
                        "sha256",
                        "decompiled_method_hash",
                        "smali_method_hash",
                        "decompiled_class_name",
                        "decompiled_method_name",
                        "decompiled_method_signature",
                        "decompiled_method_prototype",
                        "functions_caller",
                        "functions_call",
                        "analysis_date",
                    ],
                    "column_type_names": [
                        "FixedString(64)",
                        "FixedString(64)",
                        "Nullable(FixedString(64))",
                        "LowCardinality(String)",
                        "LowCardinality(String)",
                        "String",
                        "String",
                        "Array(String)",
                        "Array(String)",
                        "DateTime64(3, 'UTC')",
                    ],
                }

            # Table 3: Smali method content
            if self.analysis_results.get("smali_content"):
                export["smali_content"] = {
                    "table": "code_apk_smali_methods_content",
                    "data": [
                        [
                            f["smali_method_hash"],
                            f["smali_method"],
                            f.get("smali_method_type", "UNKNOWN"),
                            f.get("smali_instructions_count", 0),
                            f.get("smali_register_count", 0),
                            1 if f.get("smali_has_string_encryption") else 0,
                            1 if f.get("smali_has_reflection_calls") else 0,
                            1 if f.get("smali_excessive_goto_count") else 0,
                            f.get("smali_flattened_score", 0.0),
                            f.get("smali_mba_score", 0.0),
                            now,
                        ]
                        for f in self.analysis_results["smali_content"]
                    ],
                    "column_names": [
                        "smali_method_hash",
                        "smali_method",
                        "smali_method_type",
                        "smali_instructions_count",
                        "smali_register_count",
                        "smali_has_string_encryption",
                        "smali_has_reflection_calls",
                        "smali_excessive_goto_count",
                        "smali_flattened_score",
                        "smali_mba_score",
                        "analysis_date",
                    ],
                    "column_type_names": [
                        "FixedString(64)",
                        "String",
                        "Enum8('USER'=1, 'LIBRARY'=2, 'UNKNOWN'=5)",
                        "UInt32",
                        "UInt16",
                        "UInt8",
                        "UInt8",
                        "UInt8",
                        "Float64",
                        "Float64",
                        "DateTime64(3, 'UTC')",
                    ],
                }

            # Table 4: Smali method references
            if self.analysis_results.get("smali_refs"):
                export["smali_refs"] = {
                    "table": "code_apk_smali_methods_references",
                    "data": [
                        [
                            self.analysis_results["sha256"],
                            f["smali_method_hash"],
                            f.get("decompiled_method_hash"),
                            f.get("smali_class_name", ""),
                            f.get("smali_method_name", ""),
                            f.get("smali_method_signature", ""),
                            now,
                        ]
                        for f in self.analysis_results["smali_refs"]
                    ],
                    "column_names": [
                        "sha256",
                        "smali_method_hash",
                        "decompiled_method_hash",
                        "smali_class_name",
                        "smali_method_name",
                        "smali_method_signature",
                        "analysis_date",
                    ],
                    "column_type_names": [
                        "FixedString(64)",
                        "FixedString(64)",
                        "Nullable(FixedString(64))",
                        "LowCardinality(String)",
                        "LowCardinality(String)",
                        "String",
                        "DateTime64(3, 'UTC')",
                    ],
                }

            # Table 5: Method similarity metrics (content-based fuzzy matching)
            if self.analysis_results.get("similarity_metrics"):
                export["method_similarity_metrics"] = {
                    "table": "code_apk_method_similarity_metrics",
                    "data": [
                        [
                            f["smali_method_hash"],
                            f.get("ssdeep_smali"),
                            f.get("tlsh_smali"),
                            f.get("ssdeep_smali_normalized"),
                            f.get("tlsh_smali_normalized"),
                            f.get("minhash", []),
                            now,
                        ]
                        for f in self.analysis_results["similarity_metrics"]
                    ],
                    "column_names": [
                        "smali_method_hash",
                        "ssdeep_smali",
                        "tlsh_smali",
                        "ssdeep_smali_normalized",
                        "tlsh_smali_normalized",
                        "minhash",
                        "analysis_date",
                    ],
                    "column_type_names": [
                        "FixedString(64)",
                        "Nullable(String)",
                        "Nullable(FixedString(72))",
                        "Nullable(String)",
                        "Nullable(FixedString(72))",
                        "Array(UInt8)",
                        "DateTime64(3, 'UTC')",
                    ],
                }

            # Table 5b: CFG method features (structural/topological)
            if self.analysis_results.get("cfg"):
                export["cfg_methods"] = {
                    "table": "code_apk_cfg_methods",
                    "data": [
                        [
                            cfg["smali_method_hash"],
                            cfg["cfg_topology_hash"],
                            cfg["block_count"],
                            cfg["edge_count"],
                            cfg.get("cfg_instructions_count", 0),
                            cfg.get("call_count", 0),
                            cfg["cyclomatic_complexity"],
                            cfg.get("loop_count", 0),
                            cfg.get("max_depth", 0),
                            cfg.get("max_fan_out", 0),
                            cfg.get("md_index_topdown", 0),
                            cfg.get("md_index_bottomup", 0),
                            cfg.get("prime_product_smali", 0),
                            cfg.get("cfg_feature_tlsh"),
                            cfg.get("wl_minhash", []),
                            cfg.get("bb_features", []),
                            cfg.get("cfg_adjacency", []),
                            now,
                        ]
                        for cfg in self.analysis_results["cfg"]
                        if cfg is not None
                    ],
                    "column_names": [
                        "smali_method_hash",
                        "cfg_topology_hash",
                        "block_count",
                        "edge_count",
                        "cfg_instructions_count",
                        "call_count",
                        "cyclomatic_complexity",
                        "loop_count",
                        "max_depth",
                        "max_fan_out",
                        "md_index_topdown",
                        "md_index_bottomup",
                        "prime_product_smali",
                        "cfg_feature_tlsh",
                        "wl_minhash",
                        "bb_features",
                        "cfg_adjacency",
                        "analysis_date",
                    ],
                    "column_type_names": [
                        "FixedString(64)",
                        "FixedString(16)",
                        "UInt16",
                        "UInt16",
                        "UInt32",
                        "UInt16",
                        "UInt16",
                        "UInt16",
                        "UInt16",
                        "UInt16",
                        "UInt64",
                        "UInt64",
                        "UInt64",
                        "Nullable(FixedString(72))",
                        "Array(UInt8)",
                        "Array(Array(UInt16))",
                        "Array(UInt32)",
                        "DateTime64(3, 'UTC')",
                    ],
                }

            # Table 6: Strings — reuse code_binja_strings_raw for cross-format correlation
            # DEX strings are MUTF-8; string_raw = string since no encoding difference
            if self.analysis_results.get("strings"):
                export["strings_raw"] = {
                    "table": "code_binja_strings_raw",
                    "data": [
                        [
                            self.analysis_results["sha256"],
                            s["string"],
                            s["string"],  # string_raw = string (MUTF-8 decoded to UTF-8)
                            s.get("string_encoding", "UTF8"),
                            s.get("string_offset", 0),
                            s.get("string_length", len(s["string"])),
                            s.get("string_length", len(s["string"])),  # string_raw_length = string_length
                            s.get("string_entropy", 0.0),
                        ]
                        for s in self.analysis_results["strings"]
                    ],
                    "column_names": [
                        "sha256",
                        "string",
                        "string_raw",
                        "string_encoding",
                        "string_offset",
                        "string_length",
                        "string_raw_length",
                        "string_entropy",
                    ],
                    "column_type_names": [
                        "FixedString(64)",
                        "String",
                        "String",
                        "LowCardinality(String)",
                        "UInt64",
                        "UInt32",
                        "UInt32",
                        "Float32",
                    ],
                }

            # Table 7: Analysis errors
            if self.analysis_results.get("analysis_errors"):
                export["analysis_errors"] = {
                    "table": "code_apk_analysis_errors",
                    "data": [
                        [
                            self.analysis_results["sha256"],
                            f.get("class_name"),
                            f.get("method_name"),
                            f.get("error_location", "unknown"),
                            f.get("error_message", ""),
                            f.get("error_type", "unknown"),
                            self.calculate_md5(
                                f"{f.get('error_message', '')}"
                                f"{f.get('class_name', '')}"
                                f"{f.get('method_name', '')}"
                                f"{f.get('error_location', 'unknown')}"
                            ),
                            "new",
                            now,
                        ]
                        for f in self.analysis_results["analysis_errors"]
                    ],
                    "column_names": [
                        "sha256",
                        "class_name",
                        "method_name",
                        "error_location",
                        "error_message",
                        "error_type",
                        "error_hash",
                        "status",
                        "analysis_date",
                    ],
                    "column_type_names": [
                        "FixedString(64)",
                        "Nullable(String)",
                        "Nullable(String)",
                        "LowCardinality(String)",
                        "Nullable(String)",
                        "Nullable(String)",
                        "FixedString(32)",
                        "Enum8('new'=1, 'investigating'=2, 'fixed'=3, 'wontfix'=4)",
                        "DateTime64(3, 'UTC')",
                    ],
                }

            return export

        return None

    def tag(self) -> str:
        """Return the tag for this extractor."""
        return Tag.APK_DECOMPILED.value

    def get_clickhouse_table(self) -> str:
        """Not used directly as we're handling multiple tables."""
        pass