Quang-Thai Ho

12 papers Journal 12
YearRankTypeTitle / Venue / Authors
2026 J jnl
RAG-msCNN: predicting protein-DNA binding sites by integration of retrieval-augmented generation (RAG) with protein language models and the multi-scale separable convolutional neural network.
Biomed. Signal Process. Control.
Muhammad-Shahid Malik, Muhammad Hussain, Quang-Thai Ho, Van-The Le, Yu-Yen Ou
2025 J jnl
mCNN-GenEfflux: enhanced predicting Efflux protein and their super families by using generative proteins combined with multiple windows convolution neural networks.
Comput. Biol. Chem.
Muhammad Hussain, Yu-Yen Ou, Quang-Thai Ho
2022 J jnl
BERT-Promoter: An improved sequence-based predictor of DNA promoter using BERT pre-trained model and SHAP feature selection.
Comput. Biol. Chem.
Nguyen-Quoc-Khanh Le, Quang-Thai Ho, Van-Nui Nguyen, Jung-Su Chang
2022 J jnl
Identifying SNARE Proteins Using an Alignment-Free Method Based on Multiscan Convolutional Neural Network and PSSM Profiles.
J. Chem. Inf. Model.
Quang-Hien Kha, Quang-Thai Ho, Nguyen-Quoc-Khanh Le
2022 J jnl
Use Chou's 5-Steps Rule With Different Word Embedding Types to Boost Performance of Electron Transport Protein Prediction Model.
IEEE ACM Trans. Comput. Biol. Bioinform.
Trinh-Trung-Duong Nguyen, Quang-Thai Ho, Nguyen-Quoc-Khanh Le, Van-Dinh Phan, Yu-Yen Ou
2022 J jnl
mCNN-ETC: identifying electron transporters and their functional families by using multiple windows scanning techniques in convolutional neural networks with evolutionary information of protein sequences.
Briefings Bioinform.
Quang-Thai Ho, Nguyen-Quoc-Khanh Le, Yu-Yen Ou
2021 J jnl
A transformer architecture based on BERT and 2D convolutional neural network to identify DNA enhancers from sequence information.
Briefings Bioinform.
Nguyen-Quoc-Khanh Le, Quang-Thai Ho, Trinh-Trung-Duong Nguyen, Yu-Yen Ou
2021 J jnl
FAD-BERT: Improved prediction of FAD binding sites using pre-training of deep bidirectional transformers.
Comput. Biol. Medicine
Quang-Thai Ho, Trinh-Trung-Duong Nguyen, Nguyen-Quoc-Khanh Le, Yu-Yen Ou
2021 J jnl
GT-Finder: Classify the family of glucose transporters with pre-trained BERT language models.
Comput. Biol. Medicine
Syed Muazzam Ali Shah, Semmy Wellem Taju, Quang-Thai Ho, Trinh-Trung-Duong Nguyen, Yu-Yen Ou
2020 J jnl
DeepETC: A deep convolutional neural network architecture for investigating and classifying electron transport chain's complexes.
Neurocomputing
Nguyen-Quoc-Khanh Le, Quang-Thai Ho, Edward Kien Yee Yapp, Yu-Yen Ou, Hui-Yuan Yeh
2019 J jnl
Using two-dimensional convolutional neural networks for identifying GTP binding sites in Rab proteins.
J. Bioinform. Comput. Biol.
Nguyen-Quoc-Khanh Le, Quang-Thai Ho, Yu-Yen Ou
2017 J jnl
Incorporating deep learning with convolutional neural networks and position specific scoring matrices for identifying electron transport proteins.
J. Comput. Chem.
Nguyen-Quoc-Khanh Le, Quang-Thai Ho, Yu-Yen Ou