Qianqian Song

55 papers A* 1B 2C 1Misc 6Journal 37Unranked 8
YearRankTypeTitle / Venue / Authors
2025 J jnl
HECLIP: Histology-Enhanced Contrastive Learning for Imputation of Transcriptomics Profiles.
CoRR
Qing Wang, Wen-jie Chen, Bo Li, Jing Su, Guangyu Wang, Qianqian Song
2025 J jnl
HECLIP: histology-enhanced contrastive learning for imputation of transcriptomics profiles.
Bioinform.
Qing Wang, Wen-jie Chen, Jing Su, Guangyu Wang, Qianqian Song
2025 J jnl
Hybrid cross-modality fusion network for medical image segmentation with contrastive learning.
Eng. Appl. Artif. Intell.
Xichuan Zhou, Qianqian Song, Jing Nie, Yujie Feng, Haijun Liu, Fu Liang, Lihui Chen, Jin Xie
2025 J jnl
IPScan: Detecting novel intronic PolyAdenylation events with RNA-seq data.
PLoS Comput. Biol.
Naima Ahmed Fahmi, Sze Cheng, Jeovani Overstreet, Qianqian Song, Jeongsik Yong, Wei Zhang
2025 J jnl
Measuring Computational Universality of Fully Homomorphic Encryption.
CoRR
Jiaqi Xue, Xin Xin, Wei Zhang, Mengxin Zheng, Qianqian Song, Minxuan Zhou, Yushun Dong, Dongjie Wang, Xun Chen, Jiafeng Xie, Liqiang Wang, David Mohaisen, Hongyi Wu, Qian Lou
2025 J jnl
PhenoProfiler: Advancing Phenotypic Learning for Image-based Drug Discovery.
CoRR
Bo Li, Bob Zhang, Chengyang Zhang, Minghao Zhou, Weiliang Huang, Shihang Wang, Qing Wang, Mengran Li, Yong Zhang, Qianqian Song
2025 J jnl
scDrugMap: Benchmarking Large Foundation Models for Drug Response Prediction.
CoRR
Qing Wang, Yining Pan, Minghao Zhou, Zijia Tang, Yanfei Wang, Guangyu Wang, Qianqian Song
2024 J jnl
3D genomic mapping reveals multifocality of human pancreatic precancers.
Nat.
Alicia M. Braxton, Ashley L. Kiemen, Mia P. Grahn, André Forjaz, Jeeun Parksong, Jaanvi Mahesh Babu, Jiaying Lai, Lily Zheng, Noushin Niknafs, Liping Jiang, Haixia Cheng, Qianqian Song, Rebecca Reichel, Sarah Graham, Alexander Damanakis, Catherine G. Fischer, Stephanie Mou, Cameron Metz, Julie Granger, Xiao-Ding Liu, Niklas Bachmann, Yutong Zhu, Yunzhou Liu, Cristina Almagro-Pérez, Ann Chenyu Jiang, Jeonghyun Yoo, Bridgette Kim, Scott Du, Eli Foster, Jocelyn Y. Hsu, Paula Andreu Rivera, Linda C. Chu, Fengze Liu, Elliot K. Fishman, Alan L. Yuille, Nicholas J. Roberts, Elizabeth D. Thompson, Robert B. Scharpf, Toby C. Cornish, Yuchen Jiao, Rachel Karchin, Ralph H. Hruban, Pei-Hsun Wu, Denis Wirtz, Laura D. Wood
2024 B conf
An Optimization-aware Pre-Routing Timing Prediction Framework Based on Heterogeneous Graph Learning.
ASPDAC
Guoqing He, Wenjie Ding, Yuyang Ye, Xu Cheng, Qianqian Song, Peng Cao
2024 J jnl
AntiFormer: graph enhanced large language model for binding affinity prediction.
Briefings Bioinform.
Qing Wang, Yuzhou Feng, Yanfei Wang, Bo Li, Jianguo Wen, Xiaobo Zhou, Qianqian Song
2024 J jnl
Distributed credible evidence fusion with privacy-preserving.
Inf. Fusion
Chaoxiong Ma, Yan Liang, Huixia Zhang, Lianmeng Jiao, Qianqian Song, Yihan Cui
2024 J jnl
Enabling the clinical application of artificial intelligence in genomics: a perspective of the AMIA Genomics and Translational Bioinformatics Workgroup.
J. Am. Medical Informatics Assoc.
Nephi A. Walton, Radhakrishnan Nagarajan, Chen Wang, Murat Sincan, Robert R. Freimuth, David B. Everman, Derek C. Walton, Scott P. McGrath, Dominick J. Lemas, Panayiotis V. Benos, Alexander V. Alekseyenko, Qianqian Song, Ece D. Gamsiz Uzun, Casey Overby Taylor, Alper Uzun, Thomas N. Person, Nadav Rappoport, Zhongming Zhao, Marc S. Williams
2024 J jnl
Gene expression prediction from histology images via hypergraph neural networks.
Briefings Bioinform.
Bo Li, Yong Zhang, Qing Wang, Chengyang Zhang, Mengran Li, Guangyu Wang, Qianqian Song
2024 J jnl
Health disparities in the risk of severe acidosis: real-world evidence from the
J. Am. Medical Informatics Assoc.
Allison E. Gatz, Chenxi Xiong, Yao Chen, Shihui Jiang, Chi Mai Nguyen, Qianqian Song, Xiaochun Li, Pengyue Zhang, Michael Eadon, Jing Su
2024 B conf
Heterogeneous Graph Attention Network Based Statistical Timing Library Characterization with Parasitic RC Reduction.
ASPDAC
Xu Cheng, Yuyang Ye, Guoqing He, Qianqian Song, Peng Cao
2024 J jnl
MeSAM: Multiscale Enhanced Segment Anything Model for Optical Remote Sensing Images.
IEEE Trans. Geosci. Remote. Sens.
Xichuan Zhou, Fu Liang, Lihui Chen, Haijun Liu, Qianqian Song, Gemine Vivone, Jocelyn Chanussot
2024 J jnl
SCRN: Single-Cell Gene Regulatory Network Identification in Alzheimer's Disease.
IEEE ACM Trans. Comput. Biol. Bioinform.
Wentao Zhu, Zhiqiang Du, Ziang Xu, Defu Yang, Minghan Chen, Qianqian Song
2024 J jnl
TrajVis: a visual clinical decision support system to translate artificial intelligence trajectory models in the precision management of chronic kidney disease.
CoRR
Zuotian Li, Xiang Liu, Ziyang Tang, Pengyue Zhang, Nanxin Jin, Michael Eadon, Qianqian Song, Yingjie Chen, Jing Su
2024 J jnl
TrajVis: a visual clinical decision support system to translate artificial intelligence trajectory models in the precision management of chronic kidney disease.
J. Am. Medical Informatics Assoc.
Zuotian Li, Xiang Liu, Ziyang Tang, Nanxin Jin, Pengyue Zhang, Michael Eadon, Qianqian Song, Yingjie Victor Chen, Jing Su
2024 J jnl
xSiGra: explainable model for single-cell spatial data elucidation.
Briefings Bioinform.
Aishwarya Budhkar, Ziyang Tang, Xiang Liu, Xuhong Zhang, Jing Su, Qianqian Song
2023 A* conf
Critical Paths Prediction under Multiple Corners Based on BiLSTM Network.
DAC
Qianqian Song, Xu Cheng, Peng Cao
2023 J jnl
DeepAlloDriver: a deep learning-based strategy to predict cancer driver mutations.
Nucleic Acids Res.
Qianqian Song, Mingyu Li, Qian Li, Xun Lu, Kun Song, Ziliang Zhang, Jiale Wei, Liang Zhang, Jiacheng Wei, Youqiong Ye, Jinyin Zha, Qiufen Zhang, Qiang Gao, Jiang Long, Xinyi Liu, Xuefeng Lu, Jian Zhang
2023 — conf
Feature Selection for Unsupervised Machine Learning.
SmartCloud
Huyunting Huang, Ziyang Tang, Tonglin Zhang, Baijian Yang, Qianqian Song, Jing Su
2023 — conf
PINet: Privileged Information Improve the Interpretablity and generalization of structural MRI in Alzheimer's Disease.
BCB
Zijia Tang, Tonglin Zhang, Qianqian Song, Jing Su, Baijian Yang
2023 J jnl
SpaRx: elucidate single-cell spatial heterogeneity of drug responses for personalized treatment.
Briefings Bioinform.
Ziyang Tang, Xiang Liu, Zuotian Li, Tonglin Zhang, Baijian Yang, Jing Su, Qianqian Song
2023 J jnl
The First Crested Duck Genome Reveals Clues to Genetic Compensation and Crest Cushion Formation.
Genom. Proteom. Bioinform.
Guobin Chang, Xiaoya Yuan, Qixin Guo, Hao Bai, Xiaofang Cao, Meng Liu, Zhixiu Wang, Bichun Li, Shasha Wang, Yong Jiang, Zhiquan Wang, Yang Zhang, Qi Xu, Qianqian Song, Rui Pan, Lingling Qiu, Tiantian Gu, Xinsheng Wu, Yulin Bi, Zhengfeng Cao, Yu Zhang, Yang Chen, Hong Li, Jianfeng Liu, Wangcheng Dai, Guohong Chen
2023 J jnl
scENT for Revealing Gene Clusters From Single-Cell RNA-Seq Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Fan Rao, Minghan Chen, Defu Yang, Bess Morrell, Qianqian Song, Wentao Zhu
2023 J jnl
spaCI: deciphering spatial cellular communications through adaptive graph model.
Briefings Bioinform.
Ziyang Tang, Tonglin Zhang, Baijian Yang, Jing Su, Qianqian Song
2022 J jnl
An efficient auditing scheme with a novel structure for multiple replicas.
J. Supercomput.
Junfeng Tian, Qianqian Song
2022 — conf
Blockchain-Based Incentive and Arbitrable Data Auditing Scheme.
DSN Workshops
Junfeng Tian, Qianqian Song, Haoning Wang
2022 J jnl
Dual-Stream Subspace Clustering Network for revealing gene targets in Alzheimer's disease.
Comput. Biol. Medicine
Minghan Chen, Shishen Jia, Mengfan Xue, Hailiang Huang, Ziang Xu, Defu Yang, Wentao Zhu, Qianqian Song
2022 J jnl
Splitting numerical integration for matrix completion.
CoRR
Qianqian Song
2022 — conf
Study on Pyrolysis Characteristics and Kinetics of mouth rinse residues dried by Microwave vacuum.
ICBET
Wenhuan Ding, Qianqian Song, Shuge Tian
2022 J jnl
Uncovering the dynamic effects of DEX treatment on lung cancer by integrating bioinformatic inference and multiscale modeling of scRNA-seq and proteomics data.
Comput. Biol. Medicine
Minghan Chen, Chunrui Xu, Ziang Xu, Wei He, Haorui Zhang, Jing Su, Qianqian Song
2021 Misc conf
ADNet: Identify biomarkers of Alzheimer Disease with MRI and EMR data using Deep Neural Networks.
AMIA
Ziyang Tang, Qianqian Song, Jing Su, Baijian Yang
2021 J jnl
Approximate Inference via Clustering.
CoRR
Qianqian Song
2021 Misc conf
Artificial intelligence identifies the progression of cancer patients with kidney disease.
AMIA
Qianqian Song, Jing Su
2021 Misc conf
COVID-19 Mortality Prediction among Patients with Cancer Using a Large National Cohort.
AMIA
Feifan Liu, Noha Sharafeldin, Vithal Madhira, Katie R. Bradwell, Qianqian Song, Benjamin Bates, Yu R. Shao, Jing Su, Alfred Anzalone, Timothym Bergquist, Sarah Cutrona, Ben S. Gerber, Peter N. Robinson, Justin Guinney, Umit Topaloglu
2021 J jnl
DSTG: deconvoluting spatial transcriptomics data through graph-based artificial intelligence.
Briefings Bioinform.
Qianqian Song, Jing Su
2021 — conf
Fooling Neural Network Interpretations: Adversarial Noise to Attack Images.
CICAI (2)
Qianqian Song, Xiangwei Kong, Ziming Wang
2021 Misc conf
PASC CKD: revealing the progression trajectories of sustained COVID-19-related renal injury using real-world evidence.
AMIA
Jing Su, Pengyue Zhang, Zuoyi Zhang, Michael Eadon, Xiaochun Li, Tian He, Stanley Taylor, Travis Johnson, Zhaorui Liu, Ziyang Tang, Baijian Yang, Qianqian Song, Kun Huang
2021 J jnl
scLM: Automatic Detection of Consensus Gene Clusters Across Multiple Single-cell Datasets.
Genom. Proteom. Bioinform.
Qianqian Song, Jing Su, Lance D. Miller, Wei Zhang
2020 Misc conf
Leveraging Single-cell Data through Graph-based Artificial Intelligence.
AMIA
Qianqian Song, Umit Topaloglu, Jing Su, Wei Zhang
2020 C conf
Satellite Remote Sensing Observations of Trans-Atlantic Dust Transport and Deposition: A Multi-Sensor Analysis.
IGARSS
Hongbin Yu, Qian Tan, Mian Chin, Dongchul Kim, Zhibo Zhang, Qianqian Song
2020 Misc conf
Single Cell RNA Sequencing Reveals Pan-Brain Metastasis Immune Landscape.
AMIA
Jing Su, Qianqian Song, Stacey O'Neill, Jimmy Ruiz, Michael Chan, Michael Soike
2019 — conf
A Hybrid Algorithm for Mineral Dust Detection Using Satellite Data.
eScience
Peichang Shi, Qianqian Song, Janita Patwardhan, Zhibo Zhang, Jianwu Wang, Aryya Gangopadhyay
2019 J jnl
A most influential node group discovery method for influence maximization in social networks: A trust-based perspective.
Data Knowl. Eng.
Bo Zhang, Lele Zhang, Cui Mu, Qin Zhao, Qianqian Song, Xuan Hong
2019 — conf
Analysis on the Importance of Price Support-Resistance Levels of Chinese Stock Market Based on the Proposed Information Granulation and FCM Clustering Algorithm.
CSIA
Xianchang Wang, Jiayu Wang, Xuhong Lin, Lin Xue, Meiying Zhu, Qianqian Song, Xin Wang
2018 J jnl
A novel organizing scheme of single topic user group based on trust chain model in social network.
Int. J. Commun. Syst.
Meizi Li, Yang Xiang, Bo Zhang, Fazhuan Wei, Qianqian Song
2016 J jnl
A Fuzzy Collusive Attack Detection Mechanism for Reputation Aggregation in Mobile Social Networks: A Trust Relationship Based Perspective.
Mob. Inf. Syst.
Bo Zhang, Qianqian Song, Tao Yang, Zhonghua Zheng, Huan Zhang
2016 J jnl
A novel community influence evaluation scheme based on information propagation in social network.
Int. J. Comput. Sci. Math.
Bo Zhang, Qianqian Song, Ruxiang Peng, Zhenhua Huang, Qian Xu
2015 J jnl
A trust-based sentiment delivering calculation method in microblog.
Int. J. Serv. Technol. Manag.
Bo Zhang, Qianqian Song, Jianhua Ding, Liang Wang
2014 J jnl
The academic social network.
Scientometrics
Tom Z. J. Fu, Qianqian Song, Dah-Ming Chiu
2013 J jnl
The Academic Social Network.
CoRR
Tom Z. J. Fu, Qianqian Song, Dah Ming Chiu
2012 — conf
A rule-based method for commas' disambiguation in Chinese patent text.
CCIS
Qianqian Song, Yun Zhu, Lixia Wang, Yaohong Jin