Qianmu Yuan

12 papers A* 1Journal 10Unranked 1
YearRankTypeTitle / Venue / Authors
2026 A* conf
Advancing Protein Design via Multi-Agent Reinforcement Learning with Pareto-Based Collaborative Optimization.
AAAI
Mingming Zhu, Jiahua Rao, Xiaoyu Chen, Qianmu Yuan, Yuedong Yang
2025 J jnl
A 3D pocket-aware and evolutionary conserved interaction guided diffusion model for molecular optimization.
CoRR
Anjie Qiao, Hao Zhang, Qianmu Yuan, Qirui Deng, Jingtian Su, Weifeng Huang, Huihao Zhou, Guo-Bo Li, Zhen Wang, Jinping Lei
2024 — conf
GP-nano: a geometric graph network for nanobody polyreactivity prediction.
BIBM
Xiaolong Zhou, Qianmu Yuan, Shuangjia Zheng, Yu Wang, Yuedong Yang
2024 J jnl
Predicting the effects of mutations on protein solubility using graph convolution network and protein language model representation.
J. Comput. Chem.
Jing Wang, Sheng Chen, Qianmu Yuan, Jianwen Chen, Danping Li, Lei Wang, Yuedong Yang
2023 J jnl
Accurately identifying nucleic-acid-binding sites through geometric graph learning on language model predicted structures.
Briefings Bioinform.
Yidong Song, Qianmu Yuan, Huiying Zhao, Yuedong Yang
2023 J jnl
DeepProSite: structure-aware protein binding site prediction using ESMFold and pretrained language model.
Bioinform.
Yitian Fang, Yi Jiang, Leyi Wei, Qin Ma, Zhixiang Ren, Qianmu Yuan, Dong-Qing Wei
2023 J jnl
Fast and accurate protein function prediction from sequence through pretrained language model and homology-based label diffusion.
Briefings Bioinform.
Qianmu Yuan, Junjie Xie, Jiancong Xie, Huiying Zhao, Yuedong Yang
2023 J jnl
Fast and accurate protein intrinsic disorder prediction by using a pretrained language model.
Briefings Bioinform.
Yidong Song, Qianmu Yuan, Sheng Chen, Ken Chen, Yaoqi Zhou, Yuedong Yang
2023 J jnl
Identifying B-cell epitopes using AlphaFold2 predicted structures and pretrained language model.
Bioinform.
Yuansong Zeng, Zhuoyi Wei, Qianmu Yuan, Sheng Chen, Weijiang Yu, Yutong Lu, Jianzhao Gao, Yuedong Yang
2022 J jnl
Alignment-free metal ion-binding site prediction from protein sequence through pretrained language model and multi-task learning.
Briefings Bioinform.
Qianmu Yuan, Sheng Chen, Yu Wang, Huiying Zhao, Yuedong Yang
2022 J jnl
AlphaFold2-aware protein-DNA binding site prediction using graph transformer.
Briefings Bioinform.
Qianmu Yuan, Sheng Chen, Jiahua Rao, Shuangjia Zheng, Huiying Zhao, Yuedong Yang
2021 J jnl
Structure-aware protein-protein interaction site prediction using deep graph convolutional network.
Bioinform.
Qianmu Yuan, Jianwen Chen, Huiying Zhao, Yaoqi Zhou, Yuedong Yang