Qi Zhao

29 papers Journal 27Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
Dual-Modal Fusion Based on Peptide Sequence and Molecular Graph with Bidirectional Cross-Attention for Precise Peptide Toxicity Prediction.
J. Chem. Inf. Model.
Pan Li, Shaopeng Zhang, Ran Liu, Lifeng Shao, Qi Zhao
2026 J jnl
HetGAT-LMI: Interpretable Heterogeneous Graph Attention Method for Predicting lncRNA-miRNA Interactions.
J. Chem. Inf. Model.
Ran Liu, Zihao Wang, Tianming Han, Lifeng Shao, Qi Zhao
2026 J jnl
SAEF: Secure Anonymization and Encryption Framework for Open-Access Remote Photoplethysmography Datasets.
IEEE J. Biomed. Health Informatics
Fangfang Zhu, Honghong Su, Ji Ding, Qichao Niu, Qi Zhao, Jianwei Shuai
2025 J jnl
Guest Editorial: The Cutting-Edge Artificial Intelligence Techniques and Their Applications in Drug Discovery.
IEEE J. Biomed. Health Informatics
Wen Zhang, Qi Zhao, Yuru wang
2025 J jnl
Guest Editorial:Application of Computational Techniques in Drug Discovery and Disease Treatment.
IEEE J. Biomed. Health Informatics
Xing Chen, Qi Zhao
2025 J jnl
Multimodal Feature Fusion for Bone Toxicity Prediction and Local Platform.
J. Chem. Inf. Model.
Zhijie Pan, Xin Yang, Churong Wang, Tianming Han, Qi Zhao
2024 J jnl
MEAs-Filter: a novel filter framework utilizing evolutionary algorithms for cardiovascular diseases diagnosis.
Health Inf. Sci. Syst.
Fangfang Zhu, Ji Ding, Xiang Li, Yuer Lu, Xiao Liu, Frank Jiang, Qi Zhao, Honghong Su, Jianwei Shuai
2024 J jnl
SSCRB: Predicting circRNA-RBP Interaction Sites Using a Sequence and Structural Feature-Based Attention Model.
IEEE J. Biomed. Health Informatics
Liwei Liu, Yuxiao Wei, Qi Zhang, Qi Zhao
2024 J jnl
m5UMCB: Prediction of RNA 5-methyluridine sites using multi-scale convolutional neural network with BiLSTM.
Comput. Biol. Medicine
Yingshan Ji, Jianqiang Sun, Jingxuan Xie, Wei Wu, Stella C. Shuai, Qi Zhao, Wei Chen
2024 J jnl
oBABC: A one-dimensional binary artificial bee colony algorithm for binary optimization.
Swarm Evol. Comput.
Fangfang Zhu, Zhenhao Shuai, Yuer Lu, Honghong Su, Rongwen Yu, Xiang Li, Qi Zhao, Jianwei Shuai
2023 J jnl
Gene function and cell surface protein association analysis based on single-cell multiomics data.
Comput. Biol. Medicine
Huan Hu, Zhen Feng, Hai Lin, Jinyan Cheng, Jie Lyu, Yaru Zhang, Junjie Zhao, Fei Xu, Tao Lin, Qi Zhao, Jianwei Shuai
2023 J jnl
Investigating cardiotoxicity related with hERG channel blockers using molecular fingerprints and graph attention mechanism.
Comput. Biol. Medicine
Tianyi Wang, Jianqiang Sun, Qi Zhao
2023 J jnl
Modeling and analyzing single-cell multimodal data with deep parametric inference.
Briefings Bioinform.
Huan Hu, Zhen Feng, Hai Lin, Junjie Zhao, Yaru Zhang, Fei Xu, Lingling Chen, Feng Chen, Yunlong Ma, Jianzhong Su, Qi Zhao, Jianwei Shuai
2023 J jnl
Predicting metabolite-disease associations based on auto-encoder and non-negative matrix factorization.
Briefings Bioinform.
Hongyan Gao, Jianqiang Sun, Yukun Wang, Yuer Lu, Liyu Liu, Qi Zhao, Jianwei Shuai
2023 J jnl
Predicting potential interactions between lncRNAs and proteins via combined graph auto-encoder methods.
Briefings Bioinform.
Jingxuan Zhao, Jianqiang Sun, Stella C. Shuai, Qi Zhao, Jianwei Shuai
2023 J jnl
scAAGA: Single cell data analysis framework using asymmetric autoencoder with gene attention.
Comput. Biol. Medicine
Rui Meng, Shuaidong Yin, Jianqiang Sun, Huan Hu, Qi Zhao
2022 J jnl
A deep learning method for predicting metabolite-disease associations via graph neural network.
Briefings Bioinform.
Feiyue Sun, Jianqiang Sun, Qi Zhao
2022 J jnl
A merged molecular representation deep learning method for blood-brain barrier permeability prediction.
Briefings Bioinform.
Qiang Tang, Fulei Nie, Qi Zhao, Wei Chen
2022 J jnl
De Novo design of potential inhibitors against SARS-CoV-2 Mpro.
Comput. Biol. Medicine
Shimeng Li, Lianxin Wang, Jinhui Meng, Qi Zhao, Li Zhang, Hongsheng Liu
2022 J jnl
DeepLncPro: an interpretable convolutional neural network model for identifying long non-coding RNA promoters.
Briefings Bioinform.
Tianyang Zhang, Qiang Tang, Fulei Nie, Qi Zhao, Wei Chen
2022 J jnl
Identification of miRNA-disease associations via deep forest ensemble learning based on autoencoder.
Briefings Bioinform.
Wei Liu, Hui Lin, Li Huang, Li Peng, Ting Tang, Qi Zhao, Li Yang
2022 J jnl
Predicting the potential human lncRNA-miRNA interactions based on graph convolution network with conditional random field.
Briefings Bioinform.
Wenya Wang, Li Zhang, Jianqiang Sun, Qi Zhao, Jianwei Shuai
2021 J jnl
Circular RNAs and complex diseases: from experimental results to computational models.
Briefings Bioinform.
Chun-Chun Wang, Chendi Han, Qi Zhao, Xing Chen
2020 J jnl
Predicting lncRNA-miRNA interactions based on logistic matrix factorization with neighborhood regularized.
Knowl. Based Syst.
Hongsheng Liu, Guofei Ren, Haoyu Chen, Qi Liu, Yingjuan Yang, Qi Zhao
2019 J jnl
MicroRNAs and complex diseases: from experimental results to computational models.
Briefings Bioinform.
Xing Chen, Di Xie, Qi Zhao, Zhu-Hong You
2018 J jnl
BNPMDA: Bipartite Network Projection for MiRNA-Disease Association prediction.
Bioinform.
Xing Chen, Di Xie, Lei Wang, Qi Zhao, Zhu-Hong You, Hongsheng Liu
2018 — conf
HNGRNMF: Heterogeneous Network-based Graph Regularized Nonnegative Matrix Factorization for predicting events of microbe-disease associations.
BIBM
Wen Zhang, Xiaoting Lu, Weitai Yang, Feng Huang, Binlu Wang, Alan Wang, Qi Zhao
2017 — conf
Computational Prediction of Influenza Neuraminidase Inhibitors Using Machine Learning Algorithms and Recursive Feature Elimination Method.
ISBRA
Li Zhang, Haixin Ai, Qi Zhao, Junfeng Zhu, Wen Chen, Xuewei Wu, Liangchao Huang, Zimo Yin, Jian Zhao, Hongsheng Liu
2016 J jnl
Stochastic modeling suggests that noise reduces differentiation efficiency by inducing a heterogeneous drug response in glioma differentiation therapy.
BMC Syst. Biol.
Xiaoqiang Sun, Jiajun Zhang, Qi Zhao, Xing Chen, Wenbo Zhu, Guangmei Yan, Tianshou Zhou