Pralay Mitra

16 papers A* 1Journal 14Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
GDEGAN: Gaussian Dynamic Equivariant Graph Attention Network for Ligand Binding Site Prediction.
CoRR
Animesh, Plaban Kumar Bhowmick, Pralay Mitra
2026 J jnl
PEPpip: A Vision-Inspired Explainable Deep Learning Framework for Sequence-Based Protein-Protein Interaction Prediction and Interaction Map Estimation.
IEEE Access
Shubhrangshu Ghosh, Pralay Mitra
2025 — conf
ConfPred: ML-Based Conformational B-cell Epitope Prediction Using Novel Features.
ICBRA
Purnima Gautam, Pralay Mitra
2025 J jnl
E(Q)AGNN-PPIS: Attention Enhanced Equivariant Graph Neural Network for Protein-Protein Interaction Site Prediction.
IEEE Trans. Signal Inf. Process. over Networks
Animesh, Rishi Suvvada, Plaban Kumar Bhowmick, Pralay Mitra
2024 J jnl
MaTPIP: A deep-learning architecture with eXplainable AI for sequence-driven, feature mixed protein-protein interaction prediction.
Comput. Methods Programs Biomed.
Shubhrangshu Ghosh, Pralay Mitra
2021 J jnl
An Evolutionary Profile Guided Greedy Parallel Replica-Exchange Monte Carlo Search Algorithm for Rapid Convergence in Protein Design.
IEEE ACM Trans. Comput. Biol. Bioinform.
Anupam Banerjee, Kuntal Pal, Pralay Mitra
2021 J jnl
High-Performance Whole-Cell Simulation Exploiting Modular Cell Biology Principles.
J. Chem. Inf. Model.
Barnali Das, Pralay Mitra
2020 J jnl
Estimating Change in Foldability Due to Multipoint Deletions in Protein Structures.
J. Chem. Inf. Model.
Anupam Banerjee, Amit Kumar, Kushal Kanti Ghosh, Pralay Mitra
2020 J jnl
Estimating the Effect of Single-Point Mutations on Protein Thermodynamic Stability and Analyzing the Mutation Landscape of the p53 Protein.
J. Chem. Inf. Model.
Anupam Banerjee, Pralay Mitra
2019 J jnl
A network-based zoning for parallel whole-cell simulation.
Bioinform.
Barnali Das, Abhijeet Rajendra Patil, Pralay Mitra
2019 A* conf
Cluster-Based Relative Outlier Under-Sampling Technique.
ICDM
Atif Hassan, Rohini Banerjee, Pabitra Mitra, Pralay Mitra
2013 J jnl
An Evolution-Based Approach to
PLoS Comput. Biol.
Pralay Mitra, David Shultis, Jeffrey R. Brender, Jeff Czajka, David Marsh, Felicia Gray, Tomasz Cierpicki, Yang Zhang
2013 J jnl
EvoDesign:
Nucleic Acids Res.
Pralay Mitra, David Shultis, Yang Zhang
2011 J jnl
PRUNE and PROBE - two modular web services for protein-protein docking.
Nucleic Acids Res.
Pralay Mitra, Debnath Pal
2011 J jnl
Using correlated parameters for improved ranking of protein-protein docking decoys.
J. Comput. Chem.
Pralay Mitra, Debnath Pal
2009 J jnl
Interface of Apoptotic Protein Complexes Has Distinct Properties.
Silico Biol.
Pralay Mitra, Riddhiman Dhar, Debnath Pal