Piotr Bala

75 papers A 1B 2C 5Misc 9Journal 14Unranked 41
YearRankTypeTitle / Venue / Authors
2025 J jnl
HPV-KITE: sequence analysis software for rapid HPV genotype detection.
Briefings Bioinform.
Marek Nowicki, Magdalena Mroczek, Dhananjay Mukhedkar, Piotr Bala, Ville Nikolai Pimenoff, Laila Sara Arroyo Mühr
2023 J jnl
Performance evaluation of Java/PCJ implementation of parallel algorithms on the cloud (extended version).
Concurr. Comput. Pract. Exp.
Marek Nowicki, Lukasz Górski, Piotr Bala
2021 J jnl
PCJ Java library as a solution to integrate HPC, Big Data and Artificial Intelligence workloads.
J. Big Data
Marek Nowicki, Lukasz Górski, Piotr Bala
2020 — conf
Lightning Talks of EduHPC 2020.
EduHPC@SC
Joel C. Adams, Godmar Back, Piotr Bala, Michael K. Bane, Kirk W. Cameron, Henri Casanova, Margaret Ellis, Rafael Ferreira da Silva, Gautam Jethwani, William Koch, Tabitha Lee, Tongyu Zhu
2020 — conf
Performance Evaluation of Java/PCJ Implementation of Parallel Algorithms on the Cloud.
Euro-Par Workshops
Marek Nowicki, Lukasz Górski, Piotr Bala
2018 J jnl
Machine Learning for detection of viral sequences in human metagenomic datasets.
BMC Bioinform.
Zurab Bzhalava, Ardi Tampuu, Piotr Bala, Raul Vicente, Joakim Dillner
2018 J jnl
Massively Parallel Implementation of Sequence Alignment with Basic Local Alignment Search Tool Using Parallel Computing in Java Library.
J. Comput. Biol.
Marek Nowicki, Davit Bzhalava, Piotr Bala
2018 — conf
PCJ - Java Library for Highly Scalable HPC and Big Data Processing.
HPCS
Marek Nowicki, Lukasz Górski, Piotr Bala
2017 — conf
Big Data Analytics in Java with PCJ Library: Performance Comparison with Hadoop.
PPAM (2)
Marek Nowicki, Magdalena Ryczkowska, Lukasz Górski, Piotr Bala
2017 — conf
Evaluation of the Parallel Performance of the Java and PCJ on the Intel KNL Based Systems.
PPAM (2)
Marek Nowicki, Lukasz Górski, Piotr Bala
2017 C conf
Massively Parallel Sequence Alignment with BLAST Through Work Distribution Implemented Using PCJ Library.
ICA3PP
Marek Nowicki, Davit Bzhalava, Piotr Bala
2016 — conf
A case study of software load balancing policies implemented with the PGAS programming model.
HPCS
Lukasz Górski, Piotr Bala, Franciszek Rakowski
2015 — conf
On-line Service for Teaching Parallel Programming.
Euro-Par Workshops
Marek Nowicki, Maciej Marchwiany, Maciej Szpindler, Piotr Bala
2015 — conf
Parallel Differential Evolution in the PGAS Programming Model Implemented with PCJ Java Library.
PPAM (1)
Lukasz Górski, Franciszek Rakowski, Piotr Bala
2015 J jnl
Study of dynamics of structured knowledge: Qualitative analysis of different mapping approaches.
J. Inf. Sci.
Veslava Osinska, Piotr Bala
2015 — conf
The Performance Evaluation of the Java Implementation of Graph500.
PPAM (2)
Magdalena Ryczkowska, Marek Nowicki, Piotr Bala
2014 — conf
Grid services for genomic research. Polish national grid perspective.
HPCS
Marcelina Borcz, Rafal Kluszczynski, Grzegorz Marczak, Krzysztof Benedyczak, Piotr Bala
2014 — conf
PCJ - Java library for high performance computing in PGAS model.
HPCS
Marek Nowicki, Lukasz Górski, Patryk Grabrczyk, Piotr Bala
2014 — conf
Searching of Correlation of Weather and Cardiologic Events - Computer Methods for Relation Discovery and Events Prediction.
HEALTHINF
Blazej Zyglarski, Piotr Bala, Jeremi Mizerski
2013 — conf
Development of Domain-Specific Solutions Within the Polish Infrastructure for Advanced Scientific Research.
PPAM (1)
Jacek Kitowski, Kazimierz Wiatr, Piotr Bala, Marcelina Borcz, Andrzej Czyzewski, Lukasz Dutka, Rafal Kluszczynski, Jozef Kotus, Piotr Kustra, Norbert Meyer, Andrzej Milenin, Zofia Mosurska, Robert Pajak, Lukasz Rauch, Mariusz Sterzel, Dominik Stoklosa, Tomasz Szepieniec
2012 C conf
Information Retrieval across Information Visualization.
FedCSIS
Veslava Osinska, Piotr Bala, Michal Gawarkiewicz
2012 — conf
PCJ - New Approach for Parallel Computations in Java.
PARA
Marek Nowicki, Piotr Bala
2012 — conf
Parallel computations in Java with PCJ library.
HPCS
Marek Nowicki, Piotr Bala
2012 — conf
Processing the Biomedical Data on the Grid Using the UNICORE Workflow System.
Euro-Par Workshops
Marcelina Borcz, Rafal Kluszczynski, Katarzyna Skonieczna, Tomasz Grzybowski, Piotr Bala
2012 — ch.
Seamless Access to the PL-Grid e-Infrastructure Using UNICORE Middleware.
PL-Grid
Krzysztof Benedyczak, Marcin Stolarek, Radoslaw Rowicki, Rafal Kluszczynski, Marcelina Borcz, Grzegorz Marczak, Maciej Filocha, Piotr Bala
2012 — ch.
Training in the PL-Grid as Key Component to Attract Users to Grid e-Infrastructures.
PL-Grid
Marcelina Borcz, Krzysztof Benedyczak, Adam Padee, Rafal Kluszczynski, Grzegorz Marczak, Miroslaw Zdybek, Maciej Pawlik, Maciej Filocha, Piotr Bala
2011 C conf
Data Centered Collaboration in a Mobile Environment.
FedCSIS
Maciej Panka, Piotr Bala
2011 — conf
Distributed Collaborative Visualization on Mobile Devices Using Interactive Video Streaming Techniques.
PPAM (2)
Maciej Panka, Michal Chlebiej, Krzysztof Benedyczak, Piotr Bala
2011 J jnl
Key aspects of the UNICORE 6 security model.
Future Gener. Comput. Syst.
Krzysztof Benedyczak, Piotr Bala, Sven van den Berghe, Roger Menday, Bernd Schuller
2011 — conf
Parallel Version of Image Segmentation Algorithm Using Polygonal Markov Fields.
PPAM (1)
Rafal Kluszczynski, Piotr Bala
2011 — conf
Polish Computational Research Space for International Scientific Collaborations.
PPAM (1)
Jacek Kitowski, Michal Turala, Kazimierz Wiatr, Lukasz Dutka, Marian Bubak, Tomasz Szepieniec, Marcin Radecki, Mariusz Sterzel, Zofia Mosurska, Robert Pajak, Renata Slota, Krzysztof Kurowski, Bartek Palak, Bartlomiej Balcerek, Piotr Bala, Maciej Filocha, Rafal Tylman
2011 — conf
Visualization of multidimensional data on distributed mobile devices using interactive video streaming techniques.
MIPRO
Maciej Panka, Michal Chlebiej, Krzysztof Benedyczak, Piotr Bala
2010 — conf
Keywords Extraction - Selecting Keywords in Natural Language Texts with Markov Chains and Neural Networks.
KMIS
Blazej Zyglarski, Piotr Bala
2010 — conf
Statistical Analysis of Biomolecular Data using UNICORE Workflows.
BIOINFORMATICS
Marcelina Borcz, Rafal Kluszczynski, Piotr Bala
2010 J jnl
UNICORE 6 - Recent and Future Advancements.
Ann. des Télécommunications
Achim Streit, Piotr Bala, Alexander Beck-Ratzka, Krzysztof Benedyczak, Sandra Bergmann, Rebecca Breu, Jason Milad Daivandy, Bastian Demuth, Anastasia Eifer, André Giesler, Björn Hagemeier, Sonja Holl, Valentina Huber, Nadine Lamla, Daniel Mallmann, Ahmed Shiraz Memon, Mohammad Shahbaz Memon, Michael Rambadt, Morris Riedel, Mathilde Romberg, Bernd Schuller, Tobias Schlauch, Andreas Schreiber, Thomas Soddemann, Wolfgang Ziegler
2009 J jnl
Contests Hosting Service as a tool to teach programming.
Ann. UMCS Informatica
Rafal Kluszczynski, Lukasz Mikulski, Marek Nowicki, Piotr Bala
2009 — conf
KARDIONET: Telecardiology Based on GRID Technology.
MIE
Janusz Sierdzinski, Piotr Bala, Robert Rudowski, Marcin Grabowski, Grzegorz Karpinski, Bartosz Kaczynski
2009 C conf
Neural Networks Aided Automatic Keywords Selection.
IC3K
Blazej Zyglarski, Piotr Bala
2009 — conf
Scientific Documents Management System - Application of Kohonens Neural Networks with Reinforcement in Keywords Extraction.
KMIS
Blazej Zyglarski, Piotr Bala
2009 — conf
Towards a Common Authorization Infrastructure for the Grid.
Euro-Par Workshops
Krzysztof Benedyczak, Marcin Lewandowski, Piotr Bala
2009 — conf
UNICORE Virtual Organizations System.
PPAM (2)
Krzysztof Benedyczak, Marcin Lewandowski, Aleksander Nowinski, Piotr Bala
2008 — ch.
Classification Visualization across Mapping on a Sphere.
New Trends in Multimedia and Network Information Systems
Veslava Osinska, Piotr Bala
2008 J jnl
Development of heart motion reconstruction framework based on the 4D echocardiographic data.
Ann. UMCS Informatica
Michal Chlebiej, Krzysztof Nowinski, Piotr Scislo, Piotr Bala
2008 — conf
Estimating Metabolic Pathways Parameters Using Distributed Monte Carlo Method.
ICCSA (2)
Pawel Lebioda, Piotr Bala
2008 — conf
Unicore 6 as a platform for desktop grid.
IMCSIT
Jakub Jurkiewicz, Krzysztof Nowinski, Piotr Bala
2007 Misc conf
Asynchronous Parallel Molecular Dynamics Simulations.
PPAM
Jaroslaw Mederski, Lukasz Mikulski, Piotr Bala
2007 — conf
Chemomentum - UNICORE 6 Based Infrastructure for Complex Applications in Science and Technology.
Euro-Par Workshops
Bernd Schuller, Bastian Demuth, Hartmut Mix, Katharina Rasch, Mathilde Romberg, Sulev Sild, Uko Maran, Piotr Bala, Enrico Del Grosso, Mosé Casalegno, Nadège Piclin, Marco Pintore, Wibke Sudholt, Kim K. Baldridge
2007 — conf
Flexible Streaming Infrastructure for UNICORE.
Euro-Par Workshops
Krzysztof Benedyczak, Aleksander Nowinski, Piotr Bala
2007 C conf
Reconstruction of Heart Motion from 4D Echocardiographic Images.
CAIP
Michal Chlebiej, Krzysztof Nowinski, Piotr Scislo, Piotr Bala
2007 Misc conf
Supporting NAMD Application on the Grid Using GPE.
PPAM
Rafal Kluszczynski, Piotr Bala
2007 — conf
Web Services Interfaces and Open Standards Integration into the European UNICORE 6 Grid Middleware.
EDOCW
Morris Riedel, Bernd Schuller, Daniel Mallmann, Roger Menday, Achim Streit, Bastian Tweddell, M. Shahbaz Memon, A. Shiraz Memon, Bastian Demuth, Thomas Lippert, David F. Snelling, Sven van den Berghe, Vivian Li, M. Drescher, Alfred Geiger, Gert Ohme, Andrea Vanni, Claudio Cacciari, S. Lanzarini, P. Malfetti, Krzysztof Benedyczak, Piotr Bala, Ralf Ratering, Alexander Lukichev
2006 — conf
A DRMAA-Based Target System Interface Framework for UNICORE.
ICPADS (2)
Morris Riedel, Roger Menday, Achim Streit, Piotr Bala
2006 — conf
BLAST Application on the GPE/UnicoreGS Grid.
Euro-Par Workshops
Marcelina Borcz, Rafal Kluszczynski, Piotr Bala
2006 — conf
Enabling Reconfigurable Hardware Accelerators for the Grid.
PARELEC
Stefan Dydel, Krzysztof Benedyczak, Piotr Bala
2006 — conf
Generation of Dynamic Heart Model Based on 4D Echocardiographic Images.
ICCSA (5)
Michal Chlebiej, Pawel Mikolajczak, Krzysztof Nowinski, Piotr Scislo, Piotr Bala
2006 B conf
GridBeans: Support e-Science and Grid Applications.
e-Science
Ralf Ratering, Alexander Lukichev, Morris Riedel, Daniel Mallmann, Andrea Vanni, Claudio Cacciari, S. Lanzarini, Krzysztof Benedyczak, Marcelina Borcz, R. Kluszcynski, Piotr Bala, Gert Ohme
2006 — conf
UniGrids Streaming Framework: Enabling Streaming for the New Generation of Grids.
PARA
Krzysztof Benedyczak, Aleksander Nowinski, Krzysztof Nowinski, Piotr Bala
2005 Misc conf
Parallel Computing in Java: Looking for the Most Effective RMI Implementation for Clusters.
PPAM
Rafal Metkowski, Piotr Bala
2005 Misc conf
Real-Time Visualization in the Grid Using UNICORE Middleware.
PPAM
Krzysztof Benedyczak, Aleksander Nowinski, Krzysztof Nowinski, Piotr Bala
2005 — conf
UNICORE as Uniform Grid Environment for Life Sciences.
EGC
Krzysztof Benedyczak, Michal Wronski, Aleksander Nowinski, Krzysztof Nowinski, Jaroslaw Wypychowski, Piotr Bala
2004 Misc conf
Interactive Visualization for the UNICORE Grid Environment.
International Conference on Computational Science
Piotr Bala, Krzysztof Benedyczak, Aleksander Nowinski, Krzysztof Nowinski, Jaroslaw Wypychowski
2004 B conf
Large Scale Protein Sequence Alignment Using FPGA Reprogrammable Logic Devices.
FPL
Stefan Dydel, Piotr Bala
2004 J jnl
Life Sciences Grid in EUROGRID and GRIP Projects.
New Gener. Comput.
Jaroslaw Wypychowski, Jaroslaw Pytlinski, Lukasz Skorwider, Miroslaw Nazaruk, Krzysztof Benedyczak, Michal Wronski, Piotr Bala
2003 J jnl
EUROGRID--European computational grid testbed.
J. Parallel Distributed Comput.
Bogdan Lesyng, Piotr Bala, Dietmar W. Erwin
2003 Misc conf
Hierarchical Communication for the Parallel Simulations in the Distributed Environment.
PPAM
Rafal Metkowski, Piotr Bala
2003 Misc conf
Uniform Access to the Distributed Resources for the Computational Chemistry Using UNICORE.
International Conference on Computational Science
Jaroslaw Pytlinski, Lukasz Skorwider, Krzysztof Benedyczak, Michal Wronski, Piotr Bala, Valentina Huber
2002 A conf
BioGRID - An European Grid for Molecular Biology.
HPDC
Piotr Bala, Jaroslaw Pytlinski, Miroslaw Nazaruk, Victor Alessandrini, Denis Girou, Dietmar W. Erwin, Daniel Mallmann, Jon MacLaren, John Brooke, Jan Frode Myklebust
2002 — conf
BioGRID - Uniform Platform for Biomoleculago Nazar Applications (Research Note).
Euro-Par
Jaroslaw Pytlinski, Lukasz Skorwider, Piotr Bala, Miroslaw Nazaruk, Konrad Wawruch
2002 Misc conf
Web Based Real Time System for Wavepacket Dynamics.
International Conference on Computational Science (1)
Aleksander Nowinski, Krzysztof Nowinski, Piotr Bala
2001 J jnl
Application of Pfortran and Co-Array Fortran in the parallelization of the GROMOS96 molecular dynamics module.
Sci. Program.
Piotr Bala, Terry W. Clark, L. Ridgway Scott
2001 Misc conf
The Performance of Different Communication Mechanisms and Algorithms Used for Parallelization of Molecular Dynamics Code.
PPAM
Rafal Metkowski, Piotr Bala, Terry W. Clark
2000 — conf
Pfortran and Co-Array Fortran as Tools for Parallelization of a Large-Scale Scientific Application.
Euro-Par
Piotr Bala, Terry W. Clark
1998 — conf
Advanced Calculations and Visualization of Enzymatic Reactions with the Combined Quantum Classical Molecular Dynamics Code.
PARA
Piotr Bala, Pawel Grochowski, Krzysztof Nowinski, Terry W. Clark, Bogdan Lesyng, James Andrew McCammon
1997 — conf
Parallel Version of a Quantum Classical Molecular Dynamics Code for Complex Molecular and Biomolecular Systems.
PVM/MPI
Piotr Bala, Terry W. Clark, Pawel Grochowski, Bogdan Lesyng, James Andrew McCammon
1995 J jnl
Quantum-classical Molecular Dynamics and Its Computer Implementation.
Comput. Chem.
Piotr Bala, Palo Grochowski, Bogdan Lesyng, James Andrew McCammon