Pietro Pinoli

67 papers A 2B 5C 4Misc 1Journal 27Unranked 24
YearRankTypeTitle / Venue / Authors
2026 J jnl
GeMM-GAN: A Multimodal Generative Model Conditioned on Histopathology Images and Clinical Descriptions for Gene Expression Profile Generation.
CoRR
Francesca Pia Panaccione, Carlo Sgaravatti, Pietro Pinoli
2026 J jnl
QuAIL: Quality-Aware Inertial Learning for Robust Training under Data Corruption.
CoRR
Mattia Sabella, Alberto Archetti, Pietro Pinoli, Matteo Matteucci, Cinzia Cappiello
2025 — conf
GeMM-GAN: A Multimodal Generative Model Conditioned on Histopathology Images and Clinical Descriptions for Gene Expression Profile Generation.
ICIAP (Workshops 1)
Francesca Pia Panaccione, Carlo Sgaravatti, Pietro Pinoli
2025 J jnl
I-ETL: an interoperability-aware health (meta) data pipeline to enable federated analyses.
CoRR
Nelly Barret, Anna Bernasconi, Boris Bikbov, Pietro Pinoli
2025 J jnl
I-ETL: an interoperability-aware health (meta)data pipeline to enable federated analyses.
BMC Medical Informatics Decis. Mak.
Nelly Barret, Anna Bernasconi, Boris Bikbov, Pietro Pinoli
2025 — conf
Leveraging Profiling to Bridge Healthcare Silos for Federated Analyses.
CAiSE Forum
Nelly Barret, Anna Bernasconi, Cinzia Cappiello, Giacomo Palu, Pietro Pinoli
2024 J jnl
A comparison of online search engine autocompletion in Google and Baidu.
CoRR
Geng Liu, Pietro Pinoli, Stefano Ceri, Francesco Pierri
2024 — conf
Achieving data FAIRification in a distributed analytics research platform for rare diseases.
SWAT4HCLS
Anna Bernasconi, Cinzia Cappiello, Stefano Ceri, Pietro Pinoli
2024 — conf
Exploring Federated Learning for Emotion Recognition on Brain-Computer Interfaces.
UMAP (Adjunct Publication)
Sofia Mongardi, Pietro Pinoli
2023 J jnl
Ask Your Data - Supporting Data Science Processes by Combining AutoML and Conversational Interfaces.
IEEE Access
Sara Pidò, Pietro Pinoli, Pietro Crovari, Francesca Ieva, Franca Garzotto, Stefano Ceri
2023 — ed.
Current Trends in Web Engineering - ICWE 2022 International Workshops, BECS, SWEET and WALS, Bari, Italy, July 5-8, 2022, Revised Selected Papers
ICWE Workshops
Giuseppe Agapito, Anna Bernasconi, Cinzia Cappiello, Hasan Ali Khattak, In-Young Ko, Giuseppe Loseto, Michael Mrissa, Luca Nanni, Pietro Pinoli, Azzurra Ragone, Michele Ruta, Floriano Scioscia, Abhishek Srivastava
2023 — conf
Inference of Synthetically Lethal Pairs of Genes Involved in Metastatic Processes via Non-Negative Matrix Tri-Factorization.
ICBBT
Carolina Testa, Sara Pidò, Emanuela Jacchetti, Manuela Teresa Raimondi, Stefano Ceri, Pietro Pinoli
2023 — conf
Leveraging Non-negative Matrix Tri-Factorization and Knowledge-Based Embeddings for Drug Repurposing: an Application to Parkinson's Disease.
ICBBE
Letizia Messa, Carolina Testa, Stephana Carelli, Federica Rey, Cristina Cereda, Manuela Teresa Raimondi, Stefano Ceri, Pietro Pinoli
2023 — ed.
Machine Learning and Principles and Practice of Knowledge Discovery in Databases - International Workshops of ECML PKDD 2022, Grenoble, France, September 19-23, 2022, Proceedings, Part I
PKDD/ECML Workshops (1)
Irena Koprinska, Paolo Mignone, Riccardo Guidotti, Szymon Jaroszewicz, Holger Fröning, Francesco Gullo, Pedro M. Ferreira, Damian Roqueiro, Gaia Ceddia, Slawomir Nowaczyk, João Gama, Rita P. Ribeiro, Ricard Gavaldà, Elio Masciari, Zbigniew W. Ras, Ettore Ritacco, Francesca Naretto, Andreas Theissler, Przemyslaw Biecek, Wouter Verbeke, Gregor Schiele, Franz Pernkopf, Michaela Blott, Ilaria Bordino, Ivan Luciano Danesi, Giovanni Ponti, Lorenzo Severini, Annalisa Appice, Giuseppina Andresini, Ibéria Medeiros, Guilherme Graça, Lee Cooper, Naghmeh Ghazaleh, Jonas Richiardi, Diego Saldana Miranda, Konstantinos Sechidis, Arif Canakoglu, Sara Pidò, Pietro Pinoli, Albert Bifet, Sepideh Pashami
2023 — ed.
Machine Learning and Principles and Practice of Knowledge Discovery in Databases - International Workshops of ECML PKDD 2022, Grenoble, France, September 19-23, 2022, Proceedings, Part II
PKDD/ECML Workshops (2)
Irena Koprinska, Paolo Mignone, Riccardo Guidotti, Szymon Jaroszewicz, Holger Fröning, Francesco Gullo, Pedro M. Ferreira, Damian Roqueiro, Gaia Ceddia, Slawomir Nowaczyk, João Gama, Rita P. Ribeiro, Ricard Gavaldà, Elio Masciari, Zbigniew W. Ras, Ettore Ritacco, Francesca Naretto, Andreas Theissler, Przemyslaw Biecek, Wouter Verbeke, Gregor Schiele, Franz Pernkopf, Michaela Blott, Ilaria Bordino, Ivan Luciano Danesi, Giovanni Ponti, Lorenzo Severini, Annalisa Appice, Giuseppina Andresini, Ibéria Medeiros, Guilherme Graça, Lee Cooper, Naghmeh Ghazaleh, Jonas Richiardi, Diego Saldana Miranda, Konstantinos Sechidis, Arif Canakoglu, Sara Pidò, Pietro Pinoli, Albert Bifet, Sepideh Pashami
2023 J jnl
VariantHunter: a method and tool for fast detection of emerging SARS-CoV-2 variants.
Database J. Biol. Databases Curation
Pietro Pinoli, Arif Canakoglu, Stefano Ceri, Matteo Chiara, Erika Ferrandi, Luca Minotti, Anna Bernasconi
2022 B conf
Conceptual models and databases for searching the genome.
EDBT
Anna Bernasconi, Pietro Pinoli
2022 J jnl
GeCoAgent: A Conversational Agent for Empowering Genomic Data Extraction and Analysis.
ACM Trans. Comput. Heal.
Pietro Crovari, Sara Pidò, Pietro Pinoli, Anna Bernasconi, Arif Canakoglu, Franca Garzotto, Stefano Ceri
2022 — conf
Generalization of Probabilistic Latent Semantic Analysis to k-partite Graphs.
KDIR
Yohann Salomon, Pietro Pinoli
2022 J jnl
Investigating Deep Learning Based Breast Cancer Subtyping Using Pan-Cancer and Multi-Omic Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Francisco Cristovao, Silvia Cascianelli, Arif Canakoglu, Mark J. Carman, Luca Nanni, Pietro Pinoli, Marco Masseroli
2022 B conf
MCTK: a Multi-modal Conversational Troubleshooting Kit for supporting users in web applications.
AVI
Giulio Antonio Abbo, Pietro Crovari, Sara Pidò, Pietro Pinoli, Franca Garzotto
2022 J jnl
Predicting Drug Synergism by Means of Non-Negative Matrix Tri-Factorization.
IEEE ACM Trans. Comput. Biol. Bioinform.
Pietro Pinoli, Gaia Ceddia, Stefano Ceri, Marco Masseroli
2022 J jnl
ViruClust: direct comparison of SARS-CoV-2 genomes and genetic variants in space and time.
Bioinform.
Luca Cilibrasi, Pietro Pinoli, Anna Bernasconi, Arif Canakoglu, Matteo Chiara, Stefano Ceri
2021 — conf
A Non-Negative Matrix Tri-Factorization Based Method for Predicting Antitumor Drug Sensitivity.
CIBB
Carolina Testa, Sara Pidò, Pietro Pinoli
2021 J jnl
A review on viral data sources and search systems for perspective mitigation of COVID-19.
Briefings Bioinform.
Anna Bernasconi, Arif Canakoglu, Marco Masseroli, Pietro Pinoli, Stefano Ceri
2021 — conf
Ensemble Feature Selection for Single Cell Chromatin Conformation Analysis.
ICBBT
Amirreza Rouhi, Luca Nanni, Arif Canakoglu, Pietro Pinoli, Stefano Ceri
2021 J jnl
EpiSurf: metadata-driven search server for analyzing amino acid changes within epitopes of SARS-CoV-2 and other viral species.
Database J. Biol. Databases Curation
Anna Bernasconi, Luca Cilibrasi, Ruba Al Khalaf, Tommaso Alfonsi, Stefano Ceri, Pietro Pinoli, Arif Canakoglu
2021 J jnl
Federated sharing and processing of genomic datasets for tertiary data analysis.
Briefings Bioinform.
Arif Canakoglu, Pietro Pinoli, Andrea Gulino, Luca Nanni, Marco Masseroli, Stefano Ceri
2021 J jnl
Identifying collateral and synthetic lethal vulnerabilities within the DNA-damage response.
BMC Bioinform.
Pietro Pinoli, Sriganesh Srihari, Limsoon Wong, Stefano Ceri
2021 J jnl
ViruSurf: an integrated database to investigate viral sequences.
Nucleic Acids Res.
Arif Canakoglu, Pietro Pinoli, Anna Bernasconi, Tommaso Alfonsi, Damianos P. Melidis, Stefano Ceri
2020 J jnl
Data Science for Genomic Data Management: Challenges, Resources, Experiences.
SN Comput. Sci.
Stefano Ceri, Pietro Pinoli
2020 A conf
Empowering Virus Sequence Research Through Conceptual Modeling.
ER
Anna Bernasconi, Arif Canakoglu, Pietro Pinoli, Stefano Ceri
2020 Misc conf
Impact of Mutational Signatures on microRNA and Their Response Elements.
PSB
Eirini Stamoulakatou, Pietro Pinoli, Stefano Ceri, Rosario M. Piro
2020 J jnl
Matrix Factorization-based Technique for Drug Repurposing Predictions.
IEEE J. Biomed. Health Informatics
Gaia Ceddia, Pietro Pinoli, Stefano Ceri, Marco Masseroli
2020 — conf
OK, DNA!: A Conversational Interface to Explore Genomic Data.
CIU
Pietro Crovari, Fabio Catania, Pietro Pinoli, Philipp Roytburg, Asier Salzar, Franca Garzotto, Stefano Ceri
2019 — conf
Analysis and Visualization of Mutation Enrichments for Selected Genomic Regions and Cancer Types.
BIBM
Andrea Gulino, Eirini Stamoulakatou, Arif Canakoglu, Pietro Pinoli
2019 C conf
Deleterious Impact of Mutational Processes on Transcription Factor Binding Sites in Human Cancer.
BIBE
Pietro Pinoli, Eirini Stamoulakatou, Stefano Ceri, Rosario M. Piro
2019 — conf
Drug Repositioning Predictions by Non-Negative Matrix Tri-Factorization of Integrated Association Data.
BCB
Gaëtan Dissez, Gaia Ceddia, Pietro Pinoli, Stefano Ceri, Marco Masseroli
2019 — conf
Evaluating Deep Semi-supervised Learning for Whole-Transcriptome Breast Cancer Subtyping.
CIBB
Silvia Cascianelli, Francisco Cristovao, Arif Canakoglu, Mark J. Carman, Luca Nanni, Pietro Pinoli, Marco Masseroli
2019 J jnl
Metadata management for scientific databases.
Inf. Syst.
Pietro Pinoli, Stefano Ceri, Davide Martinenghi, Luca Nanni
2019 C conf
Non-negative Matrix Tri-Factorization for Data Integration and Network-based Drug Repositioning.
CIBCB
Gaia Ceddia, Pietro Pinoli, Stefano Ceri, Marco Masseroli
2019 J jnl
Processing of big heterogeneous genomic datasets for tertiary analysis of Next Generation Sequencing data.
Bioinform.
Marco Masseroli, Arif Canakoglu, Pietro Pinoli, Abdulrahman Kaitoua, Andrea Gulino, Olha Horlova, Luca Nanni, Anna Bernasconi, Stefano Perna, Eirini Stamoulakatou, Stefano Ceri
2019 J jnl
PyGMQL: scalable data extraction and analysis for heterogeneous genomic datasets.
BMC Bioinform.
Luca Nanni, Pietro Pinoli, Arif Canakoglu, Stefano Ceri
2018 — conf
DLA: a Distributed, Location-based and Apriori-based Algorithm for Biological Sequence Pattern Mining.
IEEE BigData
Eirini Stamoulakatou, Andrea Gulino, Pietro Pinoli
2018 A conf
Demonstration of GenoMetric Query Language.
CIKM
Stefano Ceri, Arif Canakoglu, Andrea Gulino, Abdulrahman Kaitoua, Marco Masseroli, Luca Nanni, Pietro Pinoli
2018 — conf
Exploring Genomic Datasets: from Batch to Interactive and Back.
ExploreDB@SIGMOD/PODS
Luca Nanni, Pietro Pinoli, Arif Canakoglu, Stefano Ceri
2018 J jnl
TICA: Transcriptional Interaction and Coregulation Analyzer.
Genom. Proteom. Bioinform.
Stefano Perna, Pietro Pinoli, Stefano Ceri, Limsoon Wong
2017 — conf
Bi-Dimensional Binning for Big Genomic Datasets.
BeyondMR@SIGMOD
Simone Cattani, Stefano Ceri, Abdulrahman Kaitoua, Pietro Pinoli
2017 J jnl
Data Management for Heterogeneous Genomic Datasets.
IEEE ACM Trans. Comput. Biol. Bioinform.
Stefano Ceri, Abdulrahman Kaitoua, Marco Masseroli, Pietro Pinoli, Francesco Venco
2017 — conf
Data-Driven Genomic Computing: Making sense of Signals from the Genome.
DAMDID/RCDL
Stefano Ceri, Arif Canakoglu, Abdulrahman Kaitoua, Marco Masseroli, Pietro Pinoli
2017 B conf
Evaluating Genomic Big Data Operations on SciDB and Spark.
ICWE
Simone Cattani, Stefano Ceri, Abdulrahman Kaitoua, Pietro Pinoli
2017 — conf
Experiences in the Development of a Data Management System for Genomics.
DATA (Revised Selected Papers)
Stefano Ceri, Arif Canakoglu, Abdulrahman Kaitoua, Marco Masseroli, Pietro Pinoli
2017 J jnl
Framework for Supporting Genomic Operations.
IEEE Trans. Computers
Abdulrahman Kaitoua, Pietro Pinoli, Michele Bertoni, Stefano Ceri
2017 — —
Modeling and querying genomic data.
Pietro Pinoli
2017 — conf
Overview of GeCo: A Project for Exploring and Integrating Signals from the Genome.
DAMDID/RCDL (Selected Papers)
Stefano Ceri, Anna Bernasconi, Arif Canakoglu, Andrea Gulino, Abdulrahman Kaitoua, Marco Masseroli, Luca Nanni, Pietro Pinoli
2017 — conf
Scalable Genomic Data Management System on the Cloud.
HPCS
Abdulrahman Kaitoua, Andrea Gulino, Marco Masseroli, Pietro Pinoli, Stefano Ceri
2016 J jnl
Cross-organism learning method to discover new gene functionalities.
Comput. Methods Programs Biomed.
Giacomo Domeniconi, Marco Masseroli, Gianluca Moro, Pietro Pinoli
2016 B conf
Data Management for Next Generation Genomic Computing.
EDBT
Stefano Ceri, Abdulrahman Kaitoua, Marco Masseroli, Pietro Pinoli, Francesco Venco
2015 J jnl
Computational algorithms to predict Gene Ontology annotations.
BMC Bioinform.
Pietro Pinoli, Davide Chicco, Marco Masseroli
2015 — conf
Evaluating cloud frameworks on genomic applications.
IEEE BigData
Michele Bertoni, Stefano Ceri, Abdulrahman Kaitoua, Pietro Pinoli
2015 J jnl
GenoMetric Query Language: a novel approach to large-scale genomic data management.
Bioinform.
Marco Masseroli, Pietro Pinoli, Francesco Venco, Abdulrahman Kaitoua, Vahid Jalili, Fernando Palluzzi, Heiko Müller, Stefano Ceri
2014 — conf
Discovering New Gene Functionalities from Random Perturbations of Known Gene Ontological Annotations.
KDIR
Giacomo Domeniconi, Marco Masseroli, Gianluca Moro, Pietro Pinoli
2014 C conf
Latent Dirichlet Allocation based on Gibbs Sampling for gene function prediction.
CIBCB
Pietro Pinoli, Davide Chicco, Marco Masseroli
2014 — conf
Random Perturbations of Term Weighted Gene Ontology Annotations for Discovering Gene Unknown Functionalities.
IC3K (Selected Papers)
Giacomo Domeniconi, Marco Masseroli, Gianluca Moro, Pietro Pinoli
2013 C conf
Enhanced probabilistic latent semantic analysis with weighting schemes to predict genomic annotations.
BIBE
Pietro Pinoli, Davide Chicco, Marco Masseroli
2013 — conf
Weighting Scheme Methods for Enhanced Genomic Annotation Prediction.
CIBB
Pietro Pinoli, Davide Chicco, Marco Masseroli
2012 B conf
Probabilistic Latent Semantic Analysis for prediction of Gene Ontology annotations.
IJCNN
Marco Masseroli, Davide Chicco, Pietro Pinoli