Philippe Bessières

23 papers B 1C 1Journal 11Unranked 10
YearRankTypeTitle / Venue / Authors
2016 — conf
Overview of the Bacteria Biotope Task at BioNLP Shared Task 2016.
BioNLP (Shared Task)
Louise Deléger, Robert Bossy, Estelle Chaix, Mouhamadou Ba, Arnaud Ferré, Philippe Bessières, Claire Nedellec
2016 — conf
Overview of the Regulatory Network of Plant Seed Development (SeeDev) Task at the BioNLP Shared Task 2016.
BioNLP (Shared Task)
Estelle Chaix, Bertrand Dubreucq, Abdelhak Fatihi, Dialekti Valsamou, Robert Bossy, Mouhamadou Ba, Louise Deléger, Pierre Zweigenbaum, Philippe Bessières, Loïc Lepiniec, Claire Nedellec
2015 J jnl
Overview of the gene regulation network and the bacteria biotope tasks in BioNLP'13 shared task.
BMC Bioinform.
Robert Bossy, Wiktoria Golik, Zorana Ratkovic, Dialekti Valsamou, Philippe Bessières, Claire Nédellec
2013 — conf
BioNLP Shared Task 2013 - An overview of the Genic Regulation Network Task.
BioNLP@ACL (Shared Task)
Robert Bossy, Philippe Bessières, Claire Nédellec
2013 — conf
BioNLP shared Task 2013 - An Overview of the Bacteria Biotope Task.
BioNLP@ACL (Shared Task)
Robert Bossy, Wiktoria Golik, Zorana Ratkovic, Philippe Bessières, Claire Nédellec
2012 J jnl
BioNLP Shared Task - The Bacteria Track.
BMC Bioinform.
Robert Bossy, Julien Jourde, Alain-Pierre Manine, Philippe Veber, Érick Alphonse, Maarten van de Guchte, Philippe Bessières, Claire Nedellec
2011 — conf
BioNLP Shared Task 2011 - Bacteria Biotope.
BioNLP@ACL (Shared Task)
Robert Bossy, Julien Jourde, Philippe Bessières, Maarten van de Guchte, Claire Nédellec
2011 — conf
BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming.
BioNLP@ACL (Shared Task)
Julien Jourde, Alain-Pierre Manine, Philippe Veber, Karën Fort, Robert Bossy, Érick Alphonse, Philippe Bessières
2010 C conf
Extraction of Genic Interactions with the Recursive Logical Theory of an Ontology.
CICLing
Alain-Pierre Manine, Érick Alphonse, Philippe Bessières
2009 J jnl
Learning ontological rules to extract multiple relations of genic interactions from text.
Int. J. Medical Informatics
Alain-Pierre Manine, Érick Alphonse, Philippe Bessières
2009 J jnl
Transcriptional landscape estimation from tiling array data using a model of signal shift and drift.
Bioinform.
Pierre Nicolas, Aurélie Leduc, Stéphane Robin, Simon Rasmussen, Hanne Jarmer, Philippe Bessières
2008 — conf
Information Extraction as an Ontology Population Task and Its Application to Genic Interactions.
ICTAI (2)
Alain-Pierre Manine, Érick Alphonse, Philippe Bessières
2008 J jnl
Reconstruction and analysis of the genetic and metabolic regulatory networks of the central metabolism of Bacillus subtilis.
BMC Syst. Biol.
Anne Goelzer, Fadia Bekkal-Brikci, Isabelle Martin-Verstraete, Philippe Noirot, Philippe Bessières, Stéphane Aymerich, Vincent Fromion
2006 J jnl
Event-based Information Extraction for the biomedical domain: the Caderige project
CoRR
Érick Alphonse, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, Sandrine Lagarrigue, Adeline Nazarenko, Alain-Pierre Manine, Claire Nedellec, Mohamed Ould Abdel Vetah, Thierry Poibeau, Davy Weissenbacher
2004 — conf
Event-Based Information Extraction for the Biomedical Domain: the Caderige Project.
NLPBA/BioNLP
Érick Alphonse, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, Sandrine Lagarrigue, Adeline Nazarenko, Alain-Pierre Manine, Claire Nédellec, Mohamed Ould Abdel Vetah, Thierry Poibeau, Davy Weissenbacher
2004 — conf
Extraction de processus fonctionnels en génétique des microbes à partir de résumés MEDLINE.
EGC
Alain Lelu, Philippe Bessières, Alain Zasadzinski, Dominique Besagni
2003 J jnl
MuGeN: Simultaneous Exploration of Multiple Genomes and Computer Analysis Results.
Bioinform.
Mark Hoebeke, Pierre Nicolas, Philippe Bessières
2001 J jnl
SPiD: a subtilis protein interaction database.
Bioinform.
Mark Hoebeke, Hélène Chiapello, Philippe Noirot, Philippe Bessières
2001 — conf
Sentence Filtering for Information Extraction in Genomics, a Classification Problem.
PKDD
Claire Nedellec, Mohamed Ould Abdel Vetah, Philippe Bessières
2000 J jnl
EMGLib: the Enhanced Microbial Genomes Library (update 2000).
Nucleic Acids Res.
Guy Perrière, Philippe Bessières, Bernard Labedan
1999 B conf
Searching gene transfers on
RECOMB
Laurent Bize, Florence Muri, Franck Samson, François Rodolphe, S. Dusko Ehrlich, Bernard Prun, Philippe Bessières
1999 J jnl
The Enhanced Microbial Genomes Library.
Nucleic Acids Res.
Guy Perrière, Philippe Bessières, Bernard Labedan
1997 J jnl
Micado - a network-oriented database for microbial genomes.
Comput. Appl. Biosci.
V. Biaudet, Franck Samson, Philippe Bessières