Philip V. Ogren

25 papers A* 1B 3Misc 9Journal 7Unranked 5

Year	Rank	Type	Title / Venue / Authors
2024	A*	`conf`	Adaptive Question Answering: Enhancing Language Model Proficiency for Addressing Knowledge Conflicts with Source Citations. EMNLP Sagi Shaier, Ari Kobren, Philip V. Ogren
2024	J	`jnl`	Adaptive Question Answering: Enhancing Language Model Proficiency for Addressing Knowledge Conflicts with Source Citations. CoRR Sagi Shaier, Ari Kobren, Philip V. Ogren
2014	B	`conf`	ClearTK 2.0: Design Patterns for Machine Learning in UIMA. LREC Steven Bethard, Philip V. Ogren, Lee Becker
2011	J	`jnl`	High-Precision Biological Event Extraction: Effects of System and of Data. Comput. Intell. K. Bretonnel Cohen, Karin Verspoor, Helen L. Johnson, Christophe Roeder, Philip V. Ogren, William A. Baumgartner Jr., Elizabeth K. White, Hannah J. Tipney, Lawrence Hunter
2010	—	`conf`	An architecture for complex clinical question answering. IHI Rodney D. Nielsen, James J. Masanz, Philip V. Ogren, Wayne H. Ward, James H. Martin, Guergana K. Savova, Martha Palmer
2010	—	`conf`	Improving Syntactic Coordination Resolution using Language Modeling. NAACL (Student Research Workshop) Philip V. Ogren
2010	J	`jnl`	Mayo clinical Text Analysis and Knowledge Extraction System (cTAKES): architecture, component evaluation and applications. J. Am. Medical Informatics Assoc. Guergana K. Savova, James J. Masanz, Philip V. Ogren, Jiaping Zheng, Sunghwan Sohn, Karin Kipper Schuler, Christopher G. Chute
2009	—	`conf`	High-precision biological event extraction with a concept recognizer. BioNLP@HLT-NAACL (Shared Task) K. Bretonnel Cohen, Karin Verspoor, Helen L. Johnson, Christophe Roeder, Philip V. Ogren, William A. Baumgartner Jr., Elizabeth K. White, Lawrence Hunter
2008	B	`conf`	Constructing Evaluation Corpora for Automated Clinical Named Entity Recognition. LREC Philip V. Ogren, Guergana K. Savova, Christopher G. Chute
2008	J	`jnl`	OpenDMAP: An open source, ontology-driven concept analysis engine, with applications to capturing knowledge regarding protein transport, protein interactions and cell-type-specific gene expression. BMC Bioinform. Lawrence Hunter, Zhiyong Lu, James Firby, William A. Baumgartner Jr., Helen L. Johnson, Philip V. Ogren, K. Bretonnel Cohen
2008	B	`conf`	System Evaluation on a Named Entity Corpus from Clinical Notes. LREC Karin Schuler, Vinod Kaggal, James J. Masanz, Philip V. Ogren, Guergana K. Savova
2008	J	`jnl`	Technical Brief: Mayo Clinic NLP System for Patient Smoking Status Identification. J. Am. Medical Informatics Assoc. Guergana K. Savova, Philip V. Ogren, Patrick H. Duffy, James D. Buntrock, Christopher G. Chute
2008	J	`jnl`	Word sense disambiguation across two domains: Biomedical literature and clinical notes. J. Biomed. Informatics Guergana K. Savova, Anni Coden, Igor L. Sominsky, Rie Johnson, Philip V. Ogren, Piet C. de Groen, Christopher G. Chute
2006	Misc	`conf`	Building and Evaluating Annotated Corpora for Medical NLP Systems. AMIA Philip V. Ogren, Guergana Savova, James D. Buntrock, Christopher G. Chute
2006	—	`conf`	Knowtator: A Protégé plug-in for annotated corpus construction. HLT-NAACL Philip V. Ogren
2005	J	`jnl`	BioCreAtIvE Task1A: entity identification with a stochastic tagger. BMC Bioinform. Shuhei Kinoshita, K. Bretonnel Cohen, Philip V. Ogren, Lawrence Hunter
2005	—	`conf`	Corpus Design for Biomedical Natural Language Processing. LBLODMBS@IDMB K. Bretonnel Cohen, Lynne M. Fox, Philip V. Ogren, Lawrence Hunter
2005	Misc	`conf`	Empirical data on corpus design and usage in biomedical natural language processing. AMIA K. Bretonnel Cohen, Philip V. Ogren, Lynne M. Fox, Lawrence Hunter
2005	Misc	`conf`	Implications of Compositionality in the Gene Ontology for Its Curation and Usage . Pacific Symposium on Biocomputing Philip V. Ogren, K. Bretonnel Cohen, Lawrence Hunter
2004	Misc	`conf`	The Compositional Structure of Gene Ontology Terms. Pacific Symposium on Biocomputing Philip V. Ogren, K. Bretonnel Cohen, George K. Acquaah-Mensah, Jens Eberlein, Lawrence Hunter
2000	Misc	`conf`	A formal approach to integrating synonyms with a reference terminology. AMIA Harold R. Solbrig, Peter L. Elkin, Philip V. Ogren, Christopher G. Chute
2000	Misc	`conf`	A randomized controlled trial of concept based indexing of Web page content. AMIA Peter L. Elkin, Alexander Ruggieri, Larry Bergstrom, Brent A. Bauer, Mark Lee, Philip V. Ogren, Christopher G. Chute
1999	Misc	`conf`	A large-scale evaluation of terminology integration characteristics. AMIA Furman S. McDonald, Christopher G. Chute, Philip V. Ogren, Dietlind Wahner-Roedler, Peter L. Elkin
1999	Misc	`conf`	A randomized double-blind controlled trial of automated term dissection. AMIA Peter L. Elkin, Kent R. Bailey, Philip V. Ogren, Brent A. Bauer, Christopher G. Chute
1999	Misc	`conf`	Barriers to the clinical implementation of compositionality. AMIA Lawrence K. McKnight, Peter L. Elkin, Philip V. Ogren, Christopher G. Chute