Petr Matula

25 papers B 2Journal 9Unranked 13
YearRankTypeTitle / Venue / Authors
2025 J jnl
Bio-Volumentations: A Python library for augmentation of volumetric image sequences.
SoftwareX
Lucia Hradecká, Filip Lux, Samuel Sul'an, Petr Matula
2025 J jnl
Full segmentation annotations of 3D time-lapse microscopy images of MDA231 cells.
CoRR
Aleksandra Melnikova, Petr Matula
2025 — conf
Study of Shape Fusion Algorithms for 3D Time-Lapse Microscopy.
ISBI
Aleksandra Melnikova, Petr Matula
2024 — conf
Cell Tracking Based on Integer Linear Programming and Probability Scores.
ISBI
Filip Lux, Petr Matula
2021 — conf
Topology Preserving Segmentation Fusion For Cells With Complex Shapes.
ISBI
Aleksandra Melnikova, Petr Matula
2020 J jnl
Age and gender-based human face reconstruction from single frontal image.
Multim. Tools Appl.
Zuzana Ferkova, Petra Urbanová, Dominik Cerný, Marek Zuzi, Petr Matula
2020 J jnl
Cell Segmentation by Combining Marker-Controlled Watershed and Deep Learning.
CoRR
Filip Lux, Petr Matula
2019 — conf
DIC Image Segmentation of Dense Cell Populations by Combining Deep Learning and Watershed.
ISBI
Filip Lux, Petr Matula
2019 B conf
Multimodal Point Distribution Model for Anthropological Landmark Detection.
ICIP
Zuzana Ferkova, Petr Matula
2017 — conf
Single image reconstruction of human faces using database of depth images.
VS-GAMES
Zuzana Ferkova, Marek Zuzi, Petra Urbanova, Petr Matula
2016 B conf
Vascular network formation in silico using the extended cellular potts model.
ICIP
David Svoboda, Vladimír Ulman, Peter Kovác, Barbara Salingova, Lenka Tesarová, Irena K. Koutna, Petr Matula
2015 — conf
Automated cell segmentation in phase-contrast images based on classification and region growing.
ISBI
Roman Stoklasa, Lukas Balek, Pavel Krejcí, Petr Matula
2015 J jnl
GPU implementation of linear morphological openings with arbitrary angle.
J. Real Time Image Process.
Pavel Karas, Vincent Morard, Jan Bartovsky, Thierry Grandpierre, Eva Dokládalová, Petr Matula, Petr Dokládal
2014 J jnl
A benchmark for comparison of cell tracking algorithms.
Bioinform.
Martin Maska, Vladimír Ulman, David Svoboda, Pavel Matula, Petr Matula, Cristina Ederra, Ainhoa Urbiola, Tomás España, Subramanian Venkatesan, Deepak M. W. Balak, Pavel Karas, Tereza Bolcková, Markéta Streitová, Craig Carthel, Stefano Coraluppi, Nathalie Harder, Karl Rohr, Klas E. G. Magnusson, Joakim Jaldén, Helen M. Blau, Oleh Dzyubachyk, Pavel Krízek, Guy M. Hagen, David Pastor-Escuredo, Daniel Jimenez-Carretero, María J. Ledesma-Carbayo, Arrate Muñoz-Barrutia, Erik Meijering, Michal Kozubek, Carlos Ortiz-de-Solorzano
2014 — ed.
Mathematical and Engineering Methods in Computer Science - 9th International Doctoral Workshop, MEMICS 2014, Telč, Czech Republic, October 17-19, 2014, Revised Selected Papers
MEMICS
Petr Hlinený, Zdenek Dvorák, Jirí Jaros, Jan Kofron, Jan Korenek, Petr Matula, Karel Pala
2011 J jnl
Normalizing for individual cell population context in the analysis of high-content cellular screens.
BMC Bioinform.
Bettina Knapp, Ilka Rebhan, Anil Kumar, Petr Matula, Narsis Aftab Kiani, Marco Binder, Holger Erfle, Karl Rohr, Roland Eils, Ralf Bartenschlager, Lars Kaderali
2010 J jnl
Detecting host factors involved in virus infection by observing the clustering of infected cells in siRNA screening images.
Bioinform.
Apichat Suratanee, Ilka Rebhan, Petr Matula, Anil Kumar, Lars Kaderali, Karl Rohr, Ralf Bartenschlager, Roland Eils, Rainer König
2009 — conf
Acquiarium: Free Software for the Acquisition and Analysis of 3D Images of Cells in Fluorescence Microscopy.
ISBI
Pavel Matula, Martin Maska, Ondrej Danek, Petr Matula, Michal Kozubek
2008 — conf
Automated Analysis of siRNA Screens of Virus Infected Cells Based on Immunofluorescence Microscopy.
Bildverarbeitung für die Medizin
Petr Matula, Anil Kumar, Ilka Wörz, Nathalie Harder, Holger Erfle, Ralf Bartenschlager, Roland Eils, Karl Rohr
2006 J jnl
Fast point-based 3-D alignment of live cells.
IEEE Trans. Image Process.
Petr Matula, Michal Kozubek, Vladimír Dvorák
2004 — conf
Applications of Image Registration in Human Genome Research.
ECCV Workshops CVAMIA and MMBIA
Petr Matula, Michal Kozubek, Pavel Matula
2004 — conf
Automated Confocal Microscopy: The Way of Achieving both Quality and Quantity in 3D Image Cytometry.
ISBI
Michal Kozubek, Petr Matula, Pavel Matula
2004 — conf
High-Resolution Cytometry Network Project: Client/Server System for 3D Optical Microscope Data Storage and Analysis.
3DPVT
Pavel Matula, Petr Matula, Michal Kozubek, Petr Mejzlík
2002 — conf
Automated Multi-view 3D Image Acquisition in Human Genome Research.
3DPVT
Michal Kozubek, Petr Matula, Heinz Eipel, Michael Hausmann
2002 — conf
High-Resolution Cytometry Network Project: Towards Remote a d Distributed Acquisition, Processing and Visualisation of 3D Image Data in Human Genome Research.
3DPVT
Michal Kozubek, Petr Matula, Pavel Matula, Petr Mejzlík