Peter Tompa

24 papers Journal 23Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
Regularly updated benchmark sets for statistically correct evaluations of AlphaFold applications.
Briefings Bioinform.
Laszlo Dobson, Gábor E. Tusnády, Peter Tompa
2022 J jnl
DisProt in 2022: improved quality and accessibility of protein intrinsic disorder annotation.
Nucleic Acids Res.
Federica Quaglia, Bálint Mészáros, Edoardo Salladini, András Hatos, Rita Pancsa, Lucía B. Chemes, Mátyás Pajkos, Tamas Lazar, Samuel Peña-Díaz, Jaime Santos, Veronika Ács, Nazanin Farahi, Erzsébet Fichó, Maria Cristina Aspromonte, Claudio Bassot, Anastasia Chasapi, Norman E. Davey, Radoslav Davidovic, Laszlo Dobson, Arne Elofsson, Gábor Erdös, Pascale Gaudet, Michelle G. Giglio, Juliana Glavina, Javier Iserte, Valentín Iglesias, Zsófia L. Kálmán, Matteo Lambrughi, Emanuela Leonardi, Sonia Longhi, Sandra Macedo-Ribeiro, Emiliano Maiani, Julia Marchetti, Cristina Marino Buslje, Attila Meszaros, Alexander Miguel Monzon, Giovanni Minervini, Suvarna Nadendla, Juliet F. Nilsson, Marián Novotný, Christos A. Ouzounis, Nicolas Palopoli, Elena Papaleo, Pedro J. Barbosa Pereira, Gabriele Pozzati, Vasilis J. Promponas, Jordi Pujols, Alma Carolina Sanchez Rocha, Martin Salas, Luciana Rodriguez Sawicki, Éva Schád, Aditi Shenoy, Tamás Szaniszló, Konstantinos D. Tsirigos, Nevena Veljkovic, Gustavo D. Parisi, Salvador Ventura, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto, Damiano Piovesan
2020 J jnl
DisProt: intrinsic protein disorder annotation in 2020.
Nucleic Acids Res.
András Hatos, Borbála Hajdu-Soltész, Alexander Miguel Monzon, Nicolas Palopoli, Lucía Álvarez, Burcu Aykaç Fas, Claudio Bassot, Guillermo I. Benítez, Martina Bevilacqua, Anastasia Chasapi, Lucía B. Chemes, Norman E. Davey, Radoslav Davidovic, A. Keith Dunker, Arne Elofsson, Julien Gobeill, Nicolás S. González Foutel, Govindarajan Sudha, Mainak Guharoy, Tamás Horváth, Valentin Iglesias, Andrey V. Kajava, Orsolya P. Kovács, John Lamb, Matteo Lambrughi, Tamas Lazar, Jeremy Y. Leclercq, Emanuela Leonardi, Sandra Macedo-Ribeiro, Mauricio Macossay-Castillo, Emiliano Maiani, José A. Manso, Cristina Marino Buslje, Elizabeth Martínez-Pérez, Bálint Mészáros, Ivan Micetic, Giovanni Minervini, Nikoletta Murvai, Marco Necci, Christos A. Ouzounis, Mátyás Pajkos, Lisanna Paladin, Rita Pancsa, Elena Papaleo, Gustavo D. Parisi, Emilie Pasche, Pedro J. Barbosa Pereira, Vasilis J. Promponas, Jordi Pujols, Federica Quaglia, Patrick Ruch, Marco Salvatore, Éva Schád, Beáta Szabó, Tamás Szaniszló, Stella Tamana, Ágnes Tantos, Nevena Veljkovic, Salvador Ventura, Wim F. Vranken, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto, Damiano Piovesan
2020 J jnl
Learning of signaling networks: molecular mechanisms.
CoRR
Péter Csermely, Nina Kunsic, Péter Mendik, Márk Kerestély, Teodóra Faragó, Dániel V. Veres, Peter Tompa
2020 J jnl
PhaSePro: the database of proteins driving liquid?liquid phase separation.
Nucleic Acids Res.
Bálint Mészáros, Gábor Erdös, Beáta Szabó, Éva Schád, Ágnes Tantos, Rawan Abukhairan, Tamás Horváth, Nikoletta Murvai, Orsolya P. Kovács, Márton Kovács, Silvio C. E. Tosatto, Peter Tompa, Zsuzsanna Dosztányi, Rita Pancsa
2018 J jnl
A comprehensive assessment of long intrinsic protein disorder from the DisProt database.
Bioinform.
Marco Necci, Damiano Piovesan, Zsuzsanna Dosztányi, Peter Tompa, Silvio C. E. Tosatto
2018 J jnl
AmyPro: a database of proteins with validated amyloidogenic regions.
Nucleic Acids Res.
Mihaly Varadi, Greet De Baets, Wim F. Vranken, Peter Tompa, Rita Pancsa
2018 J jnl
MobiDB 3.0: more annotations for intrinsic disorder, conformational diversity and interactions in proteins.
Nucleic Acids Res.
Damiano Piovesan, Francesco Tabaro, Lisanna Paladin, Marco Necci, Ivan Micetic, Carlo Camilloni, Norman E. Davey, Zsuzsanna Dosztányi, Bálint Mészáros, Alexander Miguel Monzon, Gustavo D. Parisi, Éva Schád, Pietro Sormanni, Peter Tompa, Michele Vendruscolo, Wim F. Vranken, Silvio C. E. Tosatto
2018 J jnl
Unique Physicochemical Patterns of Residues in Protein-Protein Interfaces.
J. Chem. Inf. Model.
Tamas Lazar, Mainak Guharoy, Éva Schád, Peter Tompa
2017 J jnl
DisProt 7.0: a major update of the database of disordered proteins.
Nucleic Acids Res.
Damiano Piovesan, Francesco Tabaro, Ivan Micetic, Marco Necci, Federica Quaglia, Christopher J. Oldfield, Maria Cristina Aspromonte, Norman E. Davey, Radoslav Davidovic, Zsuzsanna Dosztányi, Arne Elofsson, Alessandra Gasparini, András Hatos, Andrey V. Kajava, Lajos Kalmár, Emanuela Leonardi, Tamas Lazar, Sandra Macedo-Ribeiro, Mauricio Macossay-Castillo, Attila Meszaros, Giovanni Minervini, Nikoletta Murvai, Jordi Pujols, Daniel B. Roche, Edoardo Salladini, Éva Schád, Antoine Schramm, Beáta Szabó, Ágnes Tantos, Fiorella Tonello, Konstantinos D. Tsirigos, Nevena Veljkovic, Salvador Ventura, Wim F. Vranken, Per Warholm, Vladimir N. Uversky, A. Keith Dunker, Sonia Longhi, Peter Tompa, Silvio C. E. Tosatto
2016 J jnl
Start2Fold: a database of hydrogen/deuterium exchange data on protein folding and stability.
Nucleic Acids Res.
Rita Pancsa, Mihaly Varadi, Peter Tompa, Wim F. Vranken
2015 J jnl
DisCons: a novel tool to quantify and classify evolutionary conservation of intrinsic protein disorder.
BMC Bioinform.
Mihaly Varadi, Mainak Guharoy, Fruzsina Zsolyomi, Peter Tompa
2014 — conf
Dynamic approaches to structural ensembles of intrinsically disordered proteins.
IWBBIO
Peter Tompa
2014 J jnl
Synonymous Constraint Elements Show a Tendency to Encode Intrinsically Disordered Protein Segments.
PLoS Comput. Biol.
Mauricio Macossay-Castillo, Simone Kosol, Peter Tompa, Rita Pancsa
2014 J jnl
The DynaMine webserver: predicting protein dynamics from sequence.
Nucleic Acids Res.
Elisa Cilia, Rita Pancsa, Peter Tompa, Tom Lenaerts, Wim F. Vranken
2014 J jnl
pE-DB: a database of structural ensembles of intrinsically disordered and of unfolded proteins.
Nucleic Acids Res.
Mihaly Varadi, Simone Kosol, Pierre Lebrun, Erica Valentini, Martin Blackledge, A. Keith Dunker, Isabella C. Felli, Julie D. Forman-Kay, Richard W. Kriwacki, Roberta Pierattelli, Joel L. Sussman, Dmitri I. Svergun, Vladimir N. Uversky, Michele Vendruscolo, David S. Wishart, Peter E. Wright, Peter Tompa
2013 J jnl
Polycation-π Interactions Are a Driving Force for Molecular Recognition by an Intrinsically Disordered Oncoprotein Family.
PLoS Comput. Biol.
Jianhui Song, Sheung Chun Ng, Peter Tompa, Kevin A. W. Lee, Hue Sun Chan
2013 J jnl
Structural Disorder Provides Increased Adaptability for Vesicle Trafficking Pathways.
PLoS Comput. Biol.
Natalia Pietrosemoli, Rita Pancsa, Peter Tompa
2009 J jnl
Intrinsic Structural Disorder Confers Cellular Viability on Oncogenic Fusion Proteins.
PLoS Comput. Biol.
Hédi Hegyi, László Buday, Peter Tompa
2008 J jnl
Intrinsically Disordered Proteins Display No Preference for Chaperone Binding In Vivo.
PLoS Comput. Biol.
Hédi Hegyi, Peter Tompa
2008 J jnl
TOPDOM: database of domains and motifs with conservative location in transmembrane proteins.
Bioinform.
Gábor E. Tusnády, Lajos Kalmár, Hédi Hegyi, Peter Tompa, István Simon
2007 J jnl
DisProt: the Database of Disordered Proteins.
Nucleic Acids Res.
Megan Sickmeier, Justin A. Hamilton, Tanguy LeGall, Vladimir Vacic, Marc S. Cortese, Ágnes Tantos, Beáta Szabó, Peter Tompa, Jake Yue Chen, Vladimir N. Uversky, Zoran Obradovic, A. Keith Dunker
2007 J jnl
Local structural disorder imparts plasticity on linear motifs.
Bioinform.
Mónika Fuxreiter, Peter Tompa, István Simon
2005 J jnl
IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content.
Bioinform.
Zsuzsanna Dosztányi, Veronika Csizmok, Peter Tompa, István Simon