Peter B. Gilbert

15 papers A* 1Journal 13Unranked 1

Year	Rank	Type	Title / Venue / Authors
2025	A*	`conf`	Bridging Fairness and Efficiency in Conformal Inference: A Surrogate-Assisted Group-Clustered Approach. ICML Chenyin Gao, Peter B. Gilbert, Larry Han
2024	J	`jnl`	A Framework for Leveraging Machine Learning Tools to Estimate Personalized Survival Curves. J. Comput. Graph. Stat. Charles J. Wolock, Peter B. Gilbert, Noah Simon, Marco Carone
2024	J	`jnl`	GeM-LR: Discovering predictive biomarkers for small datasets in vaccine studies. PLoS Comput. Biol. Lin Lin, Rachel L. Spreng, Kelly E. Seaton, S. Moses Dennison, Lindsay C. Dahora, Daniel J. Schuster, Sheetal Sawant, Peter B. Gilbert, Youyi Fong, Neville Kisalu, Andrew J. Pollard, Georgia D. Tomaras, Jia Li
2022	J	`jnl`	Optimizing clinical dosing of combination broadly neutralizing antibodies for HIV prevention. PLoS Comput. Biol. Bryan T. Mayer, Allan C. deCamp, Yunda Huang, Joshua T. Schiffer, Raphael Gottardo, Peter B. Gilbert, Daniel B. Reeves
2021	J	`jnl`	Super LeArner Prediction of NAb Panels (SLAPNAP): a containerized tool for predicting combination monoclonal broadly neutralizing antibody sensitivity. Bioinform. Brian D. Williamson, Craig A. Magaret, Peter B. Gilbert, Sohail Nizam, Courtney Simmons, David C. Benkeser
2020	J	`jnl`	Mathematical modeling to reveal breakthrough mechanisms in the HIV Antibody Mediated Prevention (AMP) trials. PLoS Comput. Biol. Daniel B. Reeves, Yunda Huang, Elizabeth R. Duke, Bryan T. Mayer, E. Fabian Cardozo-Ojeda, Florencia A. Boshier, David A. Swan, Morgane Rolland, Merlin L. Robb, John R. Mascola, Myron S. Cohen, Lawrence Corey, Peter B. Gilbert, Joshua T. Schiffer
2019	J	`jnl`	Prediction of VRC01 neutralization sensitivity by HIV-1 gp160 sequence features. PLoS Comput. Biol. Craig A. Magaret, David C. Benkeser, Brian D. Williamson, Bhavesh Borate, Lindsay N. Carpp, Ivelin S. Georgiev, Ian Setliff, Adam S. Dingens, Noah Simon, Marco Carone, Christopher Simpkins, David C. Montefiori, Galit Alter, Wen-Han Yu, Michal Juraska, Paul Thatcher Edlefsen, Shelly Karuna, Nyaradzo M. Mgodi, Srilatha Edugupanti, Peter B. Gilbert
2018	J	`jnl`	Analysis of generalized semiparametric regression models for cumulative incidence functions with missing covariates. Comput. Stat. Data Anal. Unkyung Lee, Yanqing Sun, Thomas H. Scheike, Peter B. Gilbert
2017	J	`jnl`	SieveSifter: a web-based tool for visualizing the sieve analyses of HIV-1 vaccine efficacy trials. Bioinform. Andrew J. Gartland, Nicholas D. Kullman, Allan C. deCamp, Graham Clenaghan, Wayne Yang, Craig A. Magaret, Paul Thatcher Edlefsen, Peter B. Gilbert
2017	J	`jnl`	chngpt: threshold regression model estimation and inference. BMC Bioinform. Youyi Fong, Ying Huang, Peter B. Gilbert, Sallie R. Permar
2016	J	`jnl`	Goodness-of-fit test of the stratified mark-specific proportional hazards model with continuous mark. Comput. Stat. Data Anal. Yanqing Sun, Mei Li, Peter B. Gilbert
2015	J	`jnl`	: Comprehensive Sieve Analysis of Breakthrough HIV-1 Sequences in the RV144 Vaccine Efficacy Trial. PLoS Comput. Biol. Paul Thatcher Edlefsen, Morgane Rolland, Tomer Hertz, Sodsai Tovanabutra, Andrew J. Gartland, Allan C. deCamp, Craig A. Magaret, Hasan Ahmed, Raphael Gottardo, Michal Juraska, Connor McCoy, Brendan B. Larsen, Eric Sanders-Buell, Chris Carrico, Sergey Menis, Meera Bose, Miguel A. Arroyo, Robert J. O'Connell, Sorachai Nitayaphan, Punnee Pitisuttithum, Jaranit Kaewkungwal, Supachai Rerks-Ngarm, Merlin L. Robb, Tatsiana Kirys, Ivelin Georgiev, Peter D. Kwong, Konrad Scheffler, Sergei L. Kosakovsky Pond, Jonathan M. Carlson, Nelson Michael, William R. Schief, James I. Mullins, Jerome H. Kim, Peter B. Gilbert
2011	—	`conf`	Using HLA binding prediction algorithms for epitope mapping in HIV vaccine clinical trials. BCB Dan He, Pratima Kunwar, Eleazar Eskin, Helen Horton, Peter B. Gilbert, Tomer Hertz
2006	J	`jnl`	On Modeling HIV and T Cells In Vivo: Assessing Causal Estimators in Vaccine Trials. PLoS Comput. Biol. W. David Wick, Peter B. Gilbert, Steven G. Self
2001	J	`jnl`	An Efficient Test for Comparing Sequence Diversity between Two Populations. J. Comput. Biol. Peter B. Gilbert, Vladimir A. Novitsky, Monty A. Montano, Max Essex