Peter A. J. Hilbers

39 papers A 3B 1C 2Misc 2Journal 20Unranked 10

Year	Rank	Type	Title / Venue / Authors
2021	J	`jnl`	Interpretable systems biomarkers predict response to immune-checkpoint inhibitors. Patterns Óscar Lapuente-Santana, Maisa van Genderen, Peter A. J. Hilbers, Francesca Finotello, Federica Eduati
2020	J	`jnl`	A Distance-Based Framework for the Characterization of Metabolic Heterogeneity in Large Sets of Genome-Scale Metabolic Models. Patterns Andrea Cabbia, Peter A. J. Hilbers, Natal A. W. van Riel
2020	J	`jnl`	A Distance-Based Framework for the Characterization of Metabolic Heterogeneity in Large Sets of Genome-Scale Metabolic Models. Patterns Andrea Cabbia, Peter A. J. Hilbers, Natal A. W. van Riel
2019	J	`jnl`	Computational modelling of energy balance in individuals with Metabolic Syndrome. BMC Syst. Biol. Yvonne J. W. Rozendaal, Yanan Wang, Peter A. J. Hilbers, Natal A. W. van Riel
2019	—	`conf`	HIFUpm: a Visual Environment to Plan and Monitor High Intensity Focused Ultrasound Treatments. VCBM Daniela Modena, Davide Bassano, Aaldert Elevelt, Marco Baragona, Peter A. J. Hilbers, Michel A. Westenberg
2018	J	`jnl`	In vivo and in silico dynamics of the development of Metabolic Syndrome. PLoS Comput. Biol. Yvonne J. W. Rozendaal, Yanan Wang, Yared Paalvast, Lauren L. Tambyrajah, Zhuang Li, Ko Willems van Dijk, Patrick C. N. Rensen, Jan A. Kuivenhoven, Albert K. Groen, Peter A. J. Hilbers, Natal A. W. van Riel
2014	J	`jnl`	A Computational Model for the Analysis of Lipoprotein Distributions in the Mouse: Translating FPLC Profiles to Lipoprotein Metabolism. PLoS Comput. Biol. Fianne L. P. Sips, Christian A. Tiemann, Maaike H. Oosterveer, Albert K. Groen, Peter A. J. Hilbers, Natal A. W. van Riel
2014	J	`jnl`	Optimal experiment design for model selection in biochemical networks. BMC Syst. Biol. Joep Vanlier, Christian A. Tiemann, Peter A. J. Hilbers, Natal A. W. van Riel
2014	—	`conf`	Robustness of the Gray Code Arrangements of the Genetic Code in Mitochondria. ICT Innovations Dragan Bosnacki, Hubertus M. M. ten Eikelder, Marieke Maanders, Peter A. J. Hilbers
2013	J	`jnl`	Parameter Trajectory Analysis to Identify Treatment Effects of Pharmacological Interventions. PLoS Comput. Biol. Christian A. Tiemann, Joep Vanlier, Maaike H. Oosterveer, Albert K. Groen, Peter A. J. Hilbers, Natal A. W. van Riel
2013	J	`jnl`	Reconn: a Cytoscape Plug-in for Exploring and Visualizing Reactome. J. Bioinform. Comput. Biol. Willem P. A. Ligtenberg, Dragan Bosnacki, Peter A. J. Hilbers
2012	J	`jnl`	A Bayesian approach to targeted experiment design. Bioinform. Joep Vanlier, Christian A. Tiemann, Peter A. J. Hilbers, Natal A. W. van Riel
2012	J	`jnl`	An integrated strategy for prediction uncertainty analysis. Bioinform. Joep Vanlier, Christian A. Tiemann, Peter A. J. Hilbers, Natal A. W. van Riel
2012	J	`jnl`	Efficient reconstruction of biological networks via transitive reduction on general purpose graphics processors. BMC Bioinform. Dragan Bonaki, Maximilian R. Odenbrett, Anton Wijs, Willem P. A. Ligtenberg, Peter A. J. Hilbers
2011	J	`jnl`	Application of a ligand-based theoretical approach to derive conversion paths and ligand conformations in CYP11B2-mediated aldosterone formation. J. Comput. Chem. Luc Roumen, Bram Van Hoof, Koen Pieterse, Peter A. J. Hilbers, Erica M. G. Custers, Ralf Plate, Marcel de Gooyer, Ilona P. E. Beugels, Judith M. A. Emmen, Dirk Leysen, Jos F. M. Smits, Harry C. J. Ottenheijm, J. J. Rob Hermans
2011	J	`jnl`	Parameter adaptations during phenotype transitions in progressive diseases. BMC Syst. Biol. Christian A. Tiemann, Joep Vanlier, Peter A. J. Hilbers, Natal A. W. van Riel
2010	J	`jnl`	Computing the Stochastic Dynamics of Phosphorylation Networks. J. Comput. Biol. Marvin N. Steijaert, J. H. K. Van Den Brink, Anthony M. L. Liekens, Peter A. J. Hilbers, Huub M. M. ten Eikelder
2009	—	`conf`	Adaptive Ensemble Models of Extreme Learning Machines for Time Series Prediction. ICANN (2) Mark van Heeswijk, Yoan Miche, Tiina Lindh-Knuutila, Peter A. J. Hilbers, Timo Honkela, Erkki Oja, Amaury Lendasse
2009	J	`jnl`	Computing Algebraic Functions with Biochemical Reaction Networks. Artif. Life H. J. Buisman, Huub M. M. ten Eikelder, Peter A. J. Hilbers, Anthony M. L. Liekens
2009	—	`conf`	Large Scale Analysis of Small Repeats via Mining of the Human Genome. DEXA Workshops Inge van den Berg, Dragan Bosnacki, Peter A. J. Hilbers
2009	—	`conf`	Mining Maximal Frequent Subgraphs in KEGG Reaction Networks. DEXA Workshops Willem P. A. Ligtenberg, Dragan Bosnacki, Peter A. J. Hilbers
2008	C	`conf`	Multiple Functionalities of Biochemical Reaction Networks. ALIFE Marvin N. Steijaert, Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers
2008	C	`conf`	Simulated Evolution of Mass Conserving Reaction Networks. ALIFE Anthony M. L. Liekens, Huub M. M. ten Eikelder, Marvin N. Steijaert, Peter A. J. Hilbers
2007	—	`conf`	Computing with Feedforward Networks of Artificial Biochemical Neurons. IWNC Huub M. M. ten Eikelder, Sjoerd P. M. Crijns, Marvin N. Steijaert, Anthony M. L. Liekens, Peter A. J. Hilbers
2007	J	`jnl`	Construction of 3D models of the CYP11B family as a tool to predict ligand binding characteristics. J. Comput. Aided Mol. Des. Luc Roumen, Marijn P. A. Sanders, Koen Pieterse, Peter A. J. Hilbers, Ralf Plate, Erica M. G. Custers, Marcel de Gooyer, Jos F. M. Smits, Ilona P. E. Beugels, Judith M. A. Emmen, Harry C. J. Ottenheijm, Dirk Leysen, J. J. Rob Hermans
2006	J	`jnl`	Density distribution for a dense hard-sphere gas in micro/nano-channels: Analytical and simulation results. J. Comput. Phys. Silvia V. Nedea, Arjan J. H. Frijns, Anton A. van Steenhoven, A. P. J. Jansen, A. J. Markvoort, Peter A. J. Hilbers
2006	J	`jnl`	The Role of the Hyperpolarization-Activated Inward Current $I\rm _ f$ in Arrhythmogenesis: A Computer Model Study. IEEE Trans. Biomed. Eng. Nico H. L. Kuijpers, Rikkert H. Keldermann, Huub M. M. ten Eikelder, Theo Arts, Peter A. J. Hilbers
2004	Misc	`conf`	Molecular Dynamics and Monte Carlo Simulations for Heat Transfer in Micro and Nano-channels. International Conference on Computational Science Arjan J. H. Frijns, Silvia V. Nedea, A. J. Markvoort, Anton A. van Steenhoven, Peter A. J. Hilbers
2004	—	`conf`	Predicting Genetic Drift in 2×2 Games. GECCO (1) Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers
2003	A	`conf`	Finite Population Models of Co-evolution and Their Application to Haploidy versus Diploidy. GECCO Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers
2003	B	`conf`	Finite population models of dynamic optimization with stochastically alternating fitness functions. IEEE Congress on Evolutionary Computation Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers
2003	—	`conf`	Genetic Code as a Gray Code Revisited. METMBS Dragan Bosnacki, Huub M. M. ten Eikelder, Peter A. J. Hilbers
2003	A	`conf`	Methods for Parallel Simulations of Surface Reactions. IPDPS Silvia V. Nedea, Johan J. Lukkien, Peter A. J. Hilbers, A. P. J. Jansen
2002	A	`conf`	Modeling and Simulating Diploid Simple Genetic Algorithms. FOGA Anthony M. L. Liekens, Huub M. M. ten Eikelder, Peter A. J. Hilbers
2001	Misc	`conf`	Interpolating Wavelets in Kohn-Sham Electronic Structure Calculations. International Conference on Computational Science (1) A. J. Markvoort, R. Pino, Peter A. J. Hilbers
1996	—	`ch.`	Parallel Molecular Dynamics on a Torus Network. Applications on Advanced Architecture Computers Klaas Esselink, Peter A. J. Hilbers
1996	—	`conf`	Parallel Monte Carlo Simulation of Chemical Surface Reactions: A Case Study. HPCN Europe John Segers, Johan J. Lukkien, Peter A. J. Hilbers
1989	J	`jnl`	Deadlock-Free Message Routing in Multicomputer Networks. Distributed Comput. Peter A. J. Hilbers, Johan J. Lukkien
1987	—	`conf`	The Twisted Cube. PARLE (1) Peter A. J. Hilbers, Marion R. J. Koopman, Jan L. A. van de Snepscheut