Paulo Vilaça

16 papers Misc 5Journal 8Unranked 3
YearRankTypeTitle / Venue / Authors
2018 Misc conf
In Silico Predictions for Fucoxanthin Production by the Diatom Phaeodactylum Tricornutum.
PACBB
Cláudia M. Bauer, Paulo Vilaça, Fernanda Ramlov, Eva Regina de Oliveira, Débora Cabral Nazário, Caroline Schmitz, Rafaela Gordo Corrêa, Miguel Rocha, Marcelo Maraschin
2018 J jnl
Reconstruction of a genome-scale metabolic model for Actinobacillus succinogenes 130Z.
BMC Syst. Biol.
Bruno Pereira, Joana Miguel, Paulo Vilaça, Simão Soares, Isabel Rocha, Sónia Carneiro
2017 Misc conf
A Critical Evaluation of Automatic Atom Mapping Algorithms and Tools.
PACBB
Nuno Osório, Paulo Vilaça, Miguel Rocha
2017 J jnl
Genome-Wide Semi-Automated Annotation of Transporter Systems.
IEEE ACM Trans. Comput. Biol. Bioinform.
Oscar Dias, Daniel Gomes, Paulo Vilaça, João G. R. Cardoso, Miguel Rocha, Eugénio C. Ferreira, Isabel Rocha
2015 J jnl
Development and application of efficient pathway enumeration algorithms for metabolic engineering applications.
Comput. Methods Programs Biomed.
Filipe Liu, Paulo Vilaça, Isabel Rocha, Miguel Rocha
2014 J jnl
An integrated network visualization framework towards metabolic engineering applications.
BMC Bioinform.
Alberto Noronha, Paulo Vilaça, Miguel Rocha
2014 J jnl
CBFA: phenotype prediction integrating metabolic models with constraints derived from experimental data.
BMC Syst. Biol.
Rafael Carreira, Pedro Evangelista, Paulo Maia, Paulo Vilaça, Marcellinus Pont, Jean-François Tomb, Isabel Rocha, Miguel Rocha
2014 Misc conf
Evaluating Pathway Enumeration Algorithms in Metabolic Engineering Case Studies.
PACBB
Filipe Liu, Paulo Vilaça, Isabel Rocha, Miguel Rocha
2014 — conf
Reg4OptFlux: an OptFlux plug-in that comprises meta-heuristics approaches for Metabolic engineering using integrated models.
NaBIC
Orlando Rocha, Paulo Vilaça, Miguel Rocha, Rui Mendes
2013 Misc conf
Network Visualization Tools to Enhance Metabolic Engineering Platforms.
PACBB
Alberto Noronha, Paulo Vilaça, Miguel Rocha
2012 — conf
An Algorithm to Assemble Gene-Protein-Reaction Associations for Genome-Scale Metabolic Model Reconstruction.
PRIB
João G. R. Cardoso, Paulo Vilaça, Simão Soares, Miguel Rocha
2012 J jnl
An integrated computational environment for elementary modes analysis of biochemical networks.
Int. J. Data Min. Bioinform.
Paulo Maia, Paulo Vilaça, Isabel Rocha, Marcellinus Pont, Jean-François Tomb, Miguel Rocha
2011 Misc conf
A Study on the Robustness of Strain Optimization Algorithms.
PACBB
Paulo Vilaça, Paulo Maia, Miguel Rocha
2011 J jnl
A computational tool for the simulation and optimization of microbial strains accounting integrated metabolic/regulatory information.
Biosyst.
Paulo Vilaça, Isabel Rocha, Miguel Rocha
2010 — conf
Metaheuristics for Strain Optimization Using Transcriptional Information Enriched Metabolic Models.
EvoBIO
Paulo Vilaça, Paulo Maia, Isabel Rocha, Miguel Rocha
2010 J jnl
OptFlux: an open-source software platform for in silico metabolic engineering.
BMC Syst. Biol.
Isabel Rocha, Paulo Maia, Pedro Evangelista, Paulo Vilaça, Simão Soares, José P. Pinto, Jens Nielsen, Kiran Raosaheb Patil, Eugénio C. Ferreira, Miguel Rocha