Paul A. Bates

20 papers C 3Journal 17
YearRankTypeTitle / Venue / Authors
2019 C conf
Development of a Deep Learning Method to Predict Optimal Ablation Patterns for Atrial Fibrillation.
CIBCB
Marica Muffoletto, Xiao Fu, Aditi Roy, Marta Varela, Paul A. Bates, Oleg V. Aslanidi
2019 J jnl
Matrix feedback enables diverse higher-order patterning of the extracellular matrix.
PLoS Comput. Biol.
Esther Wershof, Danielle Park, Robert P. Jenkins, David J. Barry, Erik Sahai, Paul A. Bates
2017 J jnl
IRaPPA: information retrieval based integration of biophysical models for protein assembly selection.
Bioinform.
Iain H. Moal, Didier Barradas-Bautista, Brian Jiménez-García, Mieczyslaw Torchala, Arjan van der Velde, Thom Vreven, Zhiping Weng, Paul A. Bates, Juan Fernández-Recio
2016 C conf
Optimisation of a Molecular Dynamics Simulation of Chromosome Condensation.
SBAC-PAD
Timothy R. Law, Jonny Hancox, Tammy M. K. Cheng, Raphael A. G. Chaleil, Steven A. Wright, Paul A. Bates, Stephen A. Jarvis
2013 J jnl
Characterizing Changes in the Rate of Protein-Protein Dissociation upon Interface Mutation Using Hotspot Energy and Organization.
PLoS Comput. Biol.
Rudi Agius, Mieczyslaw Torchala, Iain H. Moal, Juan Fernández-Recio, Paul A. Bates
2013 J jnl
RaTrav: a tool for calculating mean first-passage times on biochemical networks.
BMC Syst. Biol.
Mieczyslaw Torchala, Przemyslaw Chelminiak, Michal Kurzynski, Paul A. Bates
2013 J jnl
SwarmDock: a server for flexible protein-protein docking.
Bioinform.
Mieczyslaw Torchala, Iain H. Moal, Raphael A. G. Chaleil, Juan Fernández-Recio, Paul A. Bates
2013 J jnl
The scoring of poses in protein-protein docking: current capabilities and future directions.
BMC Bioinform.
Iain H. Moal, Mieczyslaw Torchala, Paul A. Bates, Juan Fernández-Recio
2012 J jnl
A Structural Systems Biology Approach for Quantifying the Systemic Consequences of Missense Mutations in Proteins.
PLoS Comput. Biol.
Tammy M. K. Cheng, Lucas Goehring, Linda Jeffery, Yu-En Lu, Jacqueline Hayles, Béla Novák, Paul A. Bates
2012 J jnl
Kinetic Rate Constant Prediction Supports the Conformational Selection Mechanism of Protein Binding.
PLoS Comput. Biol.
Iain H. Moal, Paul A. Bates
2011 J jnl
Protein-protein binding affinity prediction on a diverse set of structures.
Bioinform.
Iain H. Moal, Rudi Agius, Paul A. Bates
2010 J jnl
Bridging the gaps: atomic simulation of macromolecular environment brings together protein docking, interaction kinetics and the crowding effects.
BMC Bioinform.
Xiaofan F. Li, Iain H. Moal, Paul A. Bates
2009 J jnl
Tipping the Balance: Robustness of Tip Cell Selection, Migration and Fusion in Angiogenesis.
PLoS Comput. Biol.
Katie Bentley, Giovanni Mariggi, Holger Gerhardt, Paul A. Bates
2008 C conf
Artificial life as cancer research - embodied agent modelling of blood vessel growth in tumours.
ALIFE
Katie Bentley, Paul A. Bates, Holger Gerhardt
2006 J jnl
Can MM-PBSA calculations predict the specificities of protein kinase inhibitors?
J. Comput. Chem.
Christopher S. Page, Paul A. Bates
2006 J jnl
Cluster analysis of networks generated through homology: automatic identification of important protein communities involved in cancer metastasis.
BMC Bioinform.
Pall F. Jonsson, Tamara Cavanna, Daniel Zicha, Paul A. Bates
2006 J jnl
Developing a move-set for protein model refinement.
Bioinform.
Marc N. Offman, Paul W. Fitzjohn, Paul A. Bates
2006 J jnl
Global topological features of cancer proteins in the human interactome.
Bioinform.
Pall F. Jonsson, Paul A. Bates
2006 J jnl
Probability-based model of protein-protein interactions on biological timescales.
Algorithms Mol. Biol.
Alexander L. Tournier, Paul W. Fitzjohn, Paul A. Bates
2002 J jnl
Domain Fishing: a first step in protein comparative modelling.
Bioinform.
Bruno Contreras-Moreira, Paul A. Bates