Patryk Burek

27 papers B 7C 2Misc 1Journal 4Unranked 12
YearRankTypeTitle / Venue / Authors
2024 — conf
Ontologically Founded Design Patterns for Situation Modeling.
ISD
Patryk Burek, Frank Loebe, Ralph Schäfermeier, Alexandr Uciteli, Bartosz Kondracki, Heinrich Herre
2023 — conf
Balls and Universal Space in GFO.
JOWO
Bärbel Hanle, Frank Loebe, Patryk Burek, Heinrich Herre
2023 — conf
Ontology patterns for function modeling with GFO (short paper).
ER (Companion)
Patryk Burek, Frank Loebe, Heinrich Herre
2022 J jnl
GFO: The General Formal Ontology.
Appl. Ontology
Frank Loebe, Patryk Burek, Heinrich Herre
2021 B conf
Cybersecurity Ontology for Dynamic Analysis of IT Systems.
KES
Jakub Pastuszuk, Patryk Burek, Bogdan Ksiezopolski
2021 — conf
Developing GFO 2.0 Further - Initiating the Modules of Space and Material Objects.
JOWO
Frank Loebe, Patryk Burek, Heinrich Herre
2021 B conf
Overview of GFO 2.0 Functions: An ontology module for representing teleological knowledge.
KES
Patryk Burek, Frank Loebe, Heinrich Herre
2020 B conf
A Lightweight Approach to the Multi-perspective Modeling of Processes and Objects.
KES
Patryk Burek, Heinrich Herre
2020 B conf
On the Formal Representation and Annotation of Cellular Genealogies.
EKAW
Patryk Burek, Nico Scherf, Heinrich Herre
2020 — conf
On the Ontological Foundations of Cellular Development.
JOWO
Patryk Burek, Heinrich Herre, Nico Scherf
2020 C conf
Towards GFO 2.0: Architecture, Modules and Applications.
FOIS
Patryk Burek, Frank Loebe, Heinrich Herre
2020 B conf
Towards a Modern Ontology Development Environment.
KES
Adrian Stadnicki, Filip Filip Pietron, Patryk Burek
2019 B conf
A pattern-based approach to a cell tracking ontology.
KES
Patryk Burek, Nico Scherf, Heinrich Herre
2019 — conf
Foundations of the Cell Tracking Ontology.
JOWO
Patryk Burek, Nico Scherf, Heinrich Herre
2019 J jnl
Ontology patterns for the representation of quality changes of cells in time.
J. Biomed. Semant.
Patryk Burek, Nico Scherf, Heinrich Herre
2017 J jnl
Towards refactoring the Molecular Function Ontology with a UML profile for function modeling.
J. Biomed. Semant.
Patryk Burek, Frank Loebe, Heinrich Herre
2016 J jnl
FueL: Representing function structure and function dependencies with a UML profile for function modeling.
Appl. Ontology
Patryk Burek, Frank Loebe, Heinrich Herre
2015 — conf
A UML profile for functional modeling applied to the Molecular Function Ontology.
ICBO
Patryk Burek, Frank Loebe, Heinrich Herre
2014 — conf
Search Ontology, a new approach towards Semantic Search.
GI-Jahrestagung
Alexandr Uciteli, Christoph Goller, Patryk Burek, Sebastian Siemoleit, Breno Faria, Halyna Galanzina, Timo Weiland, Doreen Drechsler-Hake, Wolfram Bartussek, Heinrich Herre
2013 — conf
Assisting the Machine Paradigms for Human-Machine Interaction in Single Cell Tracking.
Bildverarbeitung für die Medizin
Nico Scherf, Michael Kunze, Konstantin Thierbach, Thomas Zerjatke, Patryk Burek, Heinrich Herre, Ingmar Glauche, Ingo Roeder
2013 — conf
Representation, Realization, and Ascription of Functions for Material Entities.
GI-Jahrestagung
Patryk Burek, Heinrich Herre
2009 C conf
Ontological Analysis of Functional Decomposition.
SoMeT
Patryk Burek, Heinrich Herre, Frank Loebe
2006 — conf
A top-level ontology of functions and its application in the Open Biomedical Ontologies.
ISMB (Supplement of Bioinformatics)
Patryk Burek, Robert Hoehndorf, Frank Loebe, Johann Visagie, Heinrich Herre, Janet Kelso
2006 — —
Ontology of functions: a domain independent framework for modeling functions.
Patryk Burek
2005 B conf
Dually Structured Concepts in the Semantic Web: Answer Set Programming Approach.
ESWC
Patryk Burek, Rafal Grabos
2005 — conf
Essentialized Conceptual Structures in Ontology Modeling.
KES (2)
Patryk Burek
2004 Misc conf
Adoption of the Classical Theory of Definition to Ontology Modeling.
AIMSA
Patryk Burek