Patrick R. Johnstone

26 papers B 1Misc 2Journal 21Unranked 1
YearRankTypeTitle / Venue / Authors
2024 J jnl
Correction to: Stochastic projective splitting.
Comput. Optim. Appl.
Patrick R. Johnstone, Jonathan Eckstein, Thomas Flynn, Shinjae Yoo
2024 J jnl
Density estimation via measure transport: Outlook for applications in the biological sciences.
Stat. Anal. Data Min.
Vanessa López-Marrero, Patrick R. Johnstone, Gilchan Park, Xihaier Luo
2024 J jnl
Pathway-based analyses of gene expression profiles at low doses of ionizing radiation.
Frontiers Bioinform.
Xihaier Luo, Seyednami Niyakan, Patrick R. Johnstone, Sean McCorkle, Gilchan Park, Vanessa López-Marrero, Shinjae Yoo, Edward R. Dougherty, Xiaoning Qian, Francis J. Alexander, Shantenu Jha, Byung-Jun Yoon
2024 J jnl
Problem-dependent convergence bounds for randomized linear gradient compression.
CoRR
Thomas Flynn, Patrick R. Johnstone, Shinjae Yoo
2024 J jnl
Stochastic projective splitting.
Comput. Optim. Appl.
Patrick R. Johnstone, Jonathan Eckstein, Thomas Flynn, Shinjae Yoo
2023 — conf
Automated Extraction of Molecular Interactions and Pathway Knowledge using Large Language Model, Galactica: Opportunities and Challenges.
BioNLP@ACL
Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Patrick R. Johnstone, Shinjae Yoo, Francis J. Alexander
2023 J jnl
Comparative Performance Evaluation of Large Language Models for Extracting Molecular Interactions and Pathway Knowledge.
CoRR
Gilchan Park, Byung-Jun Yoon, Xihaier Luo, Vanessa López-Marrero, Patrick R. Johnstone, Shinjae Yoo, Francis J. Alexander
2023 J jnl
Density Estimation via Measure Transport: Outlook for Applications in the Biological Sciences.
CoRR
Vanessa López-Marrero, Patrick R. Johnstone, Gilchan Park, Xihaier Luo
2022 J jnl
Projective splitting with forward steps.
Math. Program.
Patrick R. Johnstone, Jonathan Eckstein
2021 J jnl
Single-forward-step projective splitting: exploiting cocoercivity.
Comput. Optim. Appl.
Patrick R. Johnstone, Jonathan Eckstein
2021 J jnl
Stochastic Projective Splitting: Solving Saddle-Point Problems with Multiple Regularizers.
CoRR
Patrick R. Johnstone, Jonathan Eckstein, Thomas Flynn, Shinjae Yoo
2020 J jnl
Faster subgradient methods for functions with Hölderian growth.
Math. Program.
Patrick R. Johnstone, Pierre Moulin
2020 J jnl
Projective splitting with forward steps only requires continuity.
Optim. Lett.
Patrick R. Johnstone, Jonathan Eckstein
2019 J jnl
Convergence Rates for Projective Splitting.
SIAM J. Optim.
Patrick R. Johnstone, Jonathan Eckstein
2019 J jnl
Single-Forward-Step Projective Splitting: Exploiting Cocoercivity.
CoRR
Patrick R. Johnstone, Jonathan Eckstein
2018 J jnl
Convergence Rates for Projective Splitting.
CoRR
Patrick R. Johnstone, Jonathan Eckstein
2018 J jnl
Projective Splitting with Forward Steps only Requires Continuity.
CoRR
Patrick R. Johnstone, Jonathan Eckstein
2018 J jnl
Projective Splitting with Forward Steps: Asynchronous and Block-Iterative Operator Splitting.
CoRR
Patrick R. Johnstone, Jonathan Eckstein
2017 — —
Accelerated first-order optimization methods using inertia and error bounds
Patrick R. Johnstone
2017 Misc conf
Convergence rates of inertial splitting schemes for nonconvex composite optimization.
ICASSP
Patrick R. Johnstone, Pierre Moulin
2017 J jnl
Faster Subgradient Methods for Functions with Hölderian Growth.
CoRR
Patrick R. Johnstone, Pierre Moulin
2017 J jnl
Local and global convergence of a general inertial proximal splitting scheme for minimizing composite functions.
Comput. Optim. Appl.
Patrick R. Johnstone, Pierre Moulin
2016 J jnl
Local and Global Convergence of a General Inertial Proximal Splitting Scheme.
CoRR
Patrick R. Johnstone, Pierre Moulin
2015 J jnl
A Lyapunov Analysis of FISTA with Local Linear Convergence for Sparse Optimization.
CoRR
Patrick R. Johnstone, Pierre Moulin
2015 Misc conf
Convergence of an inertial proximal method for l1-regularized least-squares.
ICASSP
Patrick R. Johnstone, Pierre Moulin
2015 B conf
Strong large deviations for Rao test score and GLRT in exponential families.
ISIT
Pierre Moulin, Patrick R. Johnstone