Patric Hagmann

54 papers B 1Journal 39Unranked 13

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Assessing workflow impact and clinical utility of AI-assisted brain aneurysm detection: a multi-reader study. CoRR Tommaso Di Noto, Sofyan Jankowski, Francesco Puccinelli, Guillaume Marie, Sébastien Tourbier, Yasser Alemán-Gómez, Oscar Esteban, Ricardo Corredor-Jerez, Guillaume Saliou, Patric Hagmann, Meritxell Bach Cuadra, Jonas Richiardi
2025	—	`conf`	Community-Driven Signal Processing On Directed Brain Graphs. EUSIPCO Alexandre Cionca, Chun Hei Michael Chan, Maria Giulia Preti, Maciej Jedynak, Yasser Alemán-Gómez, Olivier David, Patric Hagmann, Dimitri Van De Ville
2025	J	`jnl`	Comparing and Scaling fMRI Features for Brain-Behavior Prediction. CoRR Mikkel Schöttner Sieler, Thomas William Arthur Bolton, Jagruti Patel, Patric Hagmann
2025	J	`jnl`	Predicting Cognition from fMRI:A Comparative Study of Graph, Transformer, and Kernel Models Across Task and Rest Conditions. CoRR Jagruti Patel, Mikkel Schöttner, Thomas William Arthur Bolton, Patric Hagmann
2025	J	`jnl`	Structural Connectome Harmonization Using Deep Learning: The Strength of Graph Neural Networks. CoRR Jagruti Patel, Thomas William Arthur Bolton, Mikkel Schöttner, Anjali Tarun, Sébastien Tourbier, Yasser Alemán-Gómez, Jonas Richiardi, Patric Hagmann
2025	J	`jnl`	The added value for MRI radiomics and deep-learning for glioblastoma prognostication compared to clinical and molecular information. CoRR Daniel Abler, O. Pusterla, A. Joye-Kühnis, Nicolaus Andratschke, Meritxell Bach, A. Bink, S. M. Christ, Patric Hagmann, B. Pouymayou, E. Pravatà, Piotr Radojewski, Mauricio Reyes, L. Ruinelli, Roger Schaer, Bram Stieltjes, G. Treglia, Waldo Valenzuela, Roland Wiest, S. Zoergiebel, Matthias Guckenberger, Stephanie Tanadini-Lang, Adrien Depeursinge
2024	—	`conf`	Introducing Edge-Wise Graph Signal Processing: Application to Connectome Fingerprinting. ISBI Thomas William Arthur Bolton, Mikkel Schöttner, Jagruti Patel, Patric Hagmann
2023	J	`jnl`	The coupling between the spatial and temporal scales of neural processes revealed by a joint time-vertex connectome spectral analysis. NeuroImage Joan Rué Queralt, Valentina Mancini, Vincent Rochas, Caren Latrèche, Peter J. Uhlhaas, Christoph M. Michel, Gijs Plomp, Stephan Eliez, Patric Hagmann
2023	J	`jnl`	Towards Automated Brain Aneurysm Detection in TOF-MRA: Open Data, Weak Labels, and Anatomical Knowledge. Neuroinformatics Tommaso Di Noto, Guillaume Marie, Sébastien Tourbier, Yasser Alemán-Gómez, Oscar Esteban, Guillaume Saliou, Meritxell Bach Cuadra, Patric Hagmann, Jonas Richiardi
2022	J	`jnl`	Connectome Mapper 3: A Flexible and Open-Source Pipeline Software for Multiscale Multimodal Human Connectome Mapping. J. Open Source Softw. Sébastien Tourbier, Joan Rué Queralt, Katharina Glomb, Yasser Alemán-Gómez, Emeline Mullier, Alessandra Griffa, Mikkel Schöttner, Jonathan Wirsich, Mustafa Anil Tuncel, Jakub Jancovic, Meritxell Bach Cuadra, Patric Hagmann
2022	J	`jnl`	Transfer learning with weak labels from radiology reports: application to glioma change detection. CoRR Tommaso Di Noto, Meritxell Bach Cuadra, Chirine Atat, Eduardo Gamito Teiga, Monika Hegi, Andreas Hottinger, Patric Hagmann, Jonas Richiardi
2021	—	`conf`	Diagnostic Surveillance of High-Grade Gliomas: Towards Automated Change Detection Using Radiology Report Classification. PKDD/ECML Workshops (2) Tommaso Di Noto, Chirine Atat, Eduardo Gamito Teiga, Monika Hegi, Andreas Hottinger, Meritxell Bach Cuadra, Patric Hagmann, Jonas Richiardi
2021	J	`jnl`	FaBiAN: A Fetal Brain magnetic resonance Acquisition Numerical phantom. CoRR Hélène Lajous, Christopher W. Roy, Tom Hilbert, Priscille de Dumast, Sébastien Tourbier, Yasser Alemán-Gómez, Jérôme Yerly, Thomas Yu, Hamza Kebiri, Kelly Payette, Jean-Baptiste Ledoux, Reto Meuli, Patric Hagmann, András Jakab, Vincent Dunet, Mériam Koob, Tobias Kober, Matthias Stuber, Meritxell Bach Cuadra
2021	J	`jnl`	Multiscale communication in cortico-cortical networks. NeuroImage Vincent Bazinet, Reinder Vos de Wael, Patric Hagmann, Boris C. Bernhardt, Bratislav Misic
2021	—	`conf`	Simulated Half-Fourier Acquisitions Single-shot Turbo Spin Echo (HASTE) of the Fetal Brain: Application to Super-Resolution Reconstruction. UNSURE/PIPPI@MICCAI Hélène Lajous, Tom Hilbert, Christopher W. Roy, Sébastien Tourbier, Priscille de Dumast, Yasser Alemán-Gómez, Thomas Yu, Hamza Kebiri, Jean-Baptiste Ledoux, Patric Hagmann, Reto Meuli, Vincent Dunet, Mériam Koob, Matthias Stuber, Tobias Kober, Meritxell Bach Cuadra
2021	J	`jnl`	The connectome spectrum as a canonical basis for a sparse representation of fast brain activity. NeuroImage Joan Rué Queralt, Katharina Glomb, David Pascucci, Sébastien Tourbier, Margherita Carboni, Serge Vulliémoz, Gijs Plomp, Patric Hagmann
2021	J	`jnl`	Weak labels and anatomical knowledge: making deep learning practical for intracranial aneurysm detection in TOF-MRA. CoRR Tommaso Di Noto, Guillaume Marie, Sébastien Tourbier, Yasser Alemán-Gómez, Oscar Esteban, Guillaume Saliou, Meritxell Bach Cuadra, Patric Hagmann, Jonas Richiardi
2020	—	`conf`	An Anatomically-Informed 3D CNN for Brain Aneurysm Classification with Weak Labels. MLCN/RNO-AI@MICCAI Tommaso Di Noto, Guillaume Marie, Sébastien Tourbier, Yasser Alemán-Gómez, Guillaume Saliou, Meritxell Bach Cuadra, Patric Hagmann, Jonas Richiardi
2020	J	`jnl`	An anatomically-informed 3D CNN for brain aneurysm classification with weak labels. CoRR Tommaso Di Noto, Guillaume Marie, Sébastien Tourbier, Yasser Alemán-Gómez, Guillaume Saliou, Meritxell Bach Cuadra, Patric Hagmann, Jonas Richiardi
2020	J	`jnl`	Connectome spectral analysis to track EEG task dynamics on a subsecond scale. NeuroImage Katharina Glomb, Joan Rué Queralt, David Pascucci, Michaël Defferrard, Sébastien Tourbier, Margherita Carboni, Maria Rubega, Serge Vulliémoz, Gijs Plomp, Patric Hagmann
2020	—	`conf`	T2 Mapping from Super-Resolution-Reconstructed Clinical Fast Spin Echo Magnetic Resonance Acquisitions. MICCAI (2) Hélène Lajous, Tom Hilbert, Christopher W. Roy, Sébastien Tourbier, Priscille de Dumast, Thomas Yu, Jean-Philippe Thiran, Jean-Baptiste Ledoux, Davide Piccini, Patric Hagmann, Reto Meuli, Tobias Kober, Matthias Stuber, Ruud B. van Heeswijk, Meritxell Bach Cuadra
2019	J	`jnl`	A spectrum of routing strategies for brain networks. PLoS Comput. Biol. Andrea Avena-Koenigsberger, Xiaoran Yan, Artemy Kolchinsky, Martijn P. van den Heuvel, Patric Hagmann, Olaf Sporns
2019	J	`jnl`	Distinct modes of functional connectivity induced by movie-watching. NeuroImage Murat Demirtas, Adrián Ponce-Alvarez, Matthieu Gilson, Patric Hagmann, Dante Mantini, Viviana Betti, Gian Luca Romani, Karl J. Friston, Maurizio Corbetta, Gustavo Deco
2019	—	`conf`	Time-varying effective EEG source connectivity: the optimization of model parameters. EMBC Maria Rubega, David Pascucci, Joan Rué Queralt, Pieter van Mierlo, Patric Hagmann, Gijs Plomp, Christoph M. Michel
2018	J	`jnl`	Effective connectivity inferred from fMRI transition dynamics during movie viewing points to a balanced reconfiguration of cortical interactions. NeuroImage Matthieu Gilson, Gustavo Deco, Karl J. Friston, Patric Hagmann, Dante Mantini, Viviana Betti, Gian Luca Romani, Maurizio Corbetta
2018	—	`conf`	Holographic Visualisation and Interaction of Fused CT, PET and MRI Volumetric Medical Imaging Data Using Dedicated Remote GPGPU Ray Casting. POCUS/BIVPCS/CuRIOUS/CPM@MICCAI Magali Fröhlich, Christophe Bolinhas, Adrien Depeursinge, Antoine Widmer, Nicolas Chevrey, Patric Hagmann, Christian Simon, Vivianne B. C. Kokje, Stéphane Gobron
2017	J	`jnl`	Automated template-based brain localization and extraction for fetal brain MRI reconstruction. NeuroImage Sébastien Tourbier, Clemente Velasco-Annis, Vahid Taimouri, Patric Hagmann, Reto Meuli, Simon K. Warfield, Meritxell Bach Cuadra, Ali Gholipour
2017	J	`jnl`	Effect of Field Spread on Resting-State Magneto Encephalography Functional Network Analysis: A Computational Modeling Study. Brain Connect. Silvana Silva Pereira, Rikkert Hindriks, Stefanie Mühlberg, Eric Maris, Freek van Ede, Alessandra Griffa, Patric Hagmann, Gustavo Deco
2017	J	`jnl`	Routes Obey Hierarchy in Complex Networks. CoRR Attila Csoma, Attila Korösi, Gábor Rétvári, Zalán Heszberger, József Bíró, Mariann Slíz, Andrea Avena-Koenigsberger, Alessandra Griffa, Patric Hagmann, András Gulyás
2017	J	`jnl`	Transient networks of spatio-temporal connectivity map communication pathways in brain functional systems. NeuroImage Alessandra Griffa, Benjamin Ricaud, Kirell Benzi, Xavier Bresson, Alessandro Daducci, Pierre Vandergheynst, Jean-Philippe Thiran, Patric Hagmann
2016	J	`jnl`	Generative models of the human connectome. NeuroImage Richard F. Betzel, Andrea Avena-Koenigsberger, Joaquín Goñi, Ye He, Marcel A. de Reus, Alessandra Griffa, Petra E. Vértes, Bratislav Misic, Jean-Philippe Thiran, Patric Hagmann, Martijn P. van den Heuvel, Xi-Nian Zuo, Edward T. Bullmore, Olaf Sporns
2015	J	`jnl`	An efficient total variation algorithm for super-resolution in fetal brain MRI with adaptive regularization. NeuroImage Sébastien Tourbier, Xavier Bresson, Patric Hagmann, Jean-Philippe Thiran, Reto Meuli, Meritxell Bach Cuadra
2015	B	`conf`	Automatic brain extraction in fetal MRI using multi-atlas-based segmentation. Image Processing Sébastien Tourbier, Patric Hagmann, Maud Cagneaux, Laurent Guibaud, Subrahmanyam Gorthi, Marie Schaer, Jean-Philippe Thiran, Reto Meuli, Meritxell Bach Cuadra
2015	J	`jnl`	Improved statistical evaluation of group differences in connectomes by screening-filtering strategy with application to study maturation of brain connections between childhood and adolescence. NeuroImage Djalel Eddine Meskaldji, Lana Vasung, David Romascano, Jean-Philippe Thiran, Patric Hagmann, Stephan Morgenthaler, Dimitri Van De Ville
2015	J	`jnl`	Resting-State Temporal Synchronization Networks Emerge from Connectivity Topology and Heterogeneity. PLoS Comput. Biol. Adrián Ponce-Alvarez, Gustavo Deco, Patric Hagmann, Gian Luca Romani, Dante Mantini, Maurizio Corbetta
2015	J	`jnl`	Task-Driven Activity Reduces the Cortical Activity Space of the Brain: Experiment and Whole-Brain Modeling. PLoS Comput. Biol. Adrián Ponce-Alvarez, Biyu J. He, Patric Hagmann, Gustavo Deco
2014	—	`conf`	Efficient Total Variation Algorithm for Fetal Brain MRI Reconstruction. MICCAI (2) Sébastien Tourbier, Xavier Bresson, Patric Hagmann, Jean-Philippe Thiran, Reto Meuli, Meritxell Bach Cuadra
2014	J	`jnl`	Multi-scale integration and predictability in resting state brain activity. Frontiers Neuroinformatics Artemy Kolchinsky, Martijn P. van den Heuvel, Alessandra Griffa, Patric Hagmann, Luis M. Rocha, Olaf Sporns, Joaquín Goñi
2013	J	`jnl`	Comparing connectomes across subjects and populations at different scales. NeuroImage Djalel Eddine Meskaldji, Elda Fischi Gomez, Alessandra Griffa, Patric Hagmann, Stephan Morgenthaler, Jean-Philippe Thiran
2013	J	`jnl`	Structural connectomics in brain diseases. NeuroImage Alessandra Griffa, Philipp S. Baumann, Jean-Philippe Thiran, Patric Hagmann
2012	J	`jnl`	Classifying minimally disabled multiple sclerosis patients from resting state functional connectivity. NeuroImage Jonas Richiardi, Markus Gschwind, Samanta Simioni, Jean-Marie Annoni, Beatrice Greco, Patric Hagmann, Myriam Schluep, Patrik Vuilleumier, Dimitri Van De Ville
2011	J	`jnl`	The Connectome Viewer Toolkit: An Open Source Framework to Manage, Analyze, and Visualize Connectomes. Frontiers Neuroinformatics Stephan Gerhard, Alessandro Daducci, Alia Lemkaddem, Reto Meuli, Jean-Philippe Thiran, Patric Hagmann
2009	J	`jnl`	Modeling the Impact of Lesions in the Human Brain. PLoS Comput. Biol. Jeffrey Alstott, Michael Breakspear, Patric Hagmann, Leila Cammoun, Olaf Sporns
2008	J	`jnl`	Diffusion spectrum magnetic resonance imaging (DSI) tractography of crossing fibers. NeuroImage Van J. Wedeen, R. P. Wang, Jeremy D. Schmahmann, Thomas Benner, Wen-Yih Isaac Tseng, Guangping Dai, Deepak N. Pandya, Patric Hagmann, Helen D'Arceuil, Alex J. de Crespigny
2007	J	`jnl`	A level set method for segmentation of the thalamus and its nuclei in DT-MRI. Signal Process. Lisa Jonasson, Patric Hagmann, Claudio Pollo, Xavier Bresson, Cecilia Richero Wilson, Reto Meuli, Jean-Philippe Thiran
2007	J	`jnl`	Representing Diffusion MRI in 5-D Simplifies Regularization and Segmentation of White Matter Tracts. IEEE Trans. Medical Imaging Lisa Jonasson, Xavier Bresson, Jean-Philippe Thiran, Van J. Wedeen, Patric Hagmann
2006	J	`jnl`	Fibertract segmentation in position orientation space from high angular resolution diffusion MRI. NeuroImage Patric Hagmann, Lisa Jonasson, Thomas Deffieux, Reto Meuli, Jean-Philippe Thiran, Van J. Wedeen
2005	—	`—`	From diffusion MRI to brain connectomics. Patric Hagmann
2005	—	`conf`	Representing Diffusion MRI in 5D for Segmentation of White Matter Tracts with a Level Set Method. IPMI Lisa Jonasson, Patric Hagmann, Xavier Bresson, Jean-Philippe Thiran, Van J. Wedeen
2005	J	`jnl`	White matter fiber tract segmentation in DT-MRI using geometric flows. Medical Image Anal. Lisa Jonasson, Xavier Bresson, Patric Hagmann, Olivier Cuisenaire, Reto Meuli, Jean-Philippe Thiran
2003	—	`conf`	A New Brain Segmentation Framework. MICCAI (2) Torsten Butz, Patric Hagmann, Eric Tardif, Reto Meuli, Jean-Philippe Thiran
2003	J	`jnl`	DTI mapping of human brain connectivity: statistical fibre tracking and virtual dissection. NeuroImage Patric Hagmann, Jean-Philippe Thiran, Lisa Jonasson, Pierre Vandergheynst, Stephanie Clarke, Philippe Maeder, Reto Meuli
2003	—	`conf`	White Matter Mapping in DT-MRI Using Geometric Flows. EUROCAST Lisa Jonasson, Patric Hagmann, Xavier Bresson, Reto Meuli, Olivier Cuisenaire, Jean-Philippe Thiran
2002	—	`conf`	Atlas-Based Segmentation of Pathological Brains Using a Model of Tumor Growth. MICCAI (1) Meritxell Bach Cuadra, J. Gomez, Patric Hagmann, Claudio Pollo, Jean-Guy Villemure, Benoit M. Dawant, Jean-Philippe Thiran