Paolo Ribeca

16 papers A 1B 4C 1Journal 8Unranked 2
YearRankTypeTitle / Venue / Authors
2024 B conf
Efficient Neural Clustering and Compression of Strings Through Approximate Euclidean Embeddings of the Levenshtein Distance.
DCC
Ünsal Öztürk, Utku Görkem Ertürk, Simone Casale-Brunet, Paolo Ribeca, Marco Mattavelli
2023 J jnl
Distinguishing imported cases from locally acquired cases within a geographically limited genomic sample of an infectious disease.
Bioinform.
Xavier Didelot, David Helekal, Michelle Kendall, Paolo Ribeca
2023 B conf
FM-Directories: Extending the Burrows-Wheeler Transform for String Labeled Vertex Graphs of (Almost) Arbitrary Topology.
DCC
Unsal Ozturk, Paolo Ribeca, Marco Mattavelli
2023 — conf
Scaling a Variant Calling Genomics Pipeline with FaaS.
WOSC@Middleware
Aitor Arjona, Arnau Gabriel-Atienza, Sara Lanuza-Orna, Xavier Roca-Canals, Ayman Bourramouss, Tyler K. Chafin, Lucio Marcello, Paolo Ribeca, Pedro García López
2023 J jnl
Scaling a Variant Calling Genomics Pipeline with FaaS.
CoRR
Aitor Arjona, Arnau Gabriel-Atienza, Sara Lanuza-Orna, Xavier Roca-Canals, Ayman Bourramouss, Tyler K. Chafin, Lucio Marcello, Paolo Ribeca, Pedro García López
2022 B conf
A Benchmark of Entropy Coders for the Compression of Genome Sequencing Data.
DCC
Simone Casale-Brunet, Paolo Ribeca, Claudio Alberti, Unsal Ozturk, Marco Mattavelli
2022 B conf
MPEG-G Reference-Based Compression of Unaligned Reads Through Ultra-Fast Alignments.
DCC
Unsal Ozturk, Simone Casale-Brunet, Paolo Ribeca, Marco Mattavelli
2021 — conf
Networks of Ethereum Non-Fungible Tokens: A graph-based analysis of the ERC-721 ecosystem.
Blockchain
Simone Casale-Brunet, Paolo Ribeca, P. Doyle, Marco Mattavelli
2021 J jnl
Networks of Ethereum Non-Fungible Tokens: A graph-based analysis of the ERC-721 ecosystem.
CoRR
Simone Casale-Brunet, Paolo Ribeca, P. Doyle, Marco Mattavelli
2015 J jnl
Boosting the FM-Index on the GPU: Effective Techniques to Mitigate Random Memory Access.
IEEE ACM Trans. Comput. Biol. Bioinform.
Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure
2015 J jnl
CARGO: Effective format-free compressed storage of genomic information.
CoRR
Lukasz Roguski, Paolo Ribeca
2014 C conf
FM-Index on GPU: A Cooperative Scheme to Reduce Memory Footprint.
ISPA
Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure
2014 A conf
Thread-cooperative, bit-parallel computation of levenshtein distance on GPU.
ICS
Alejandro Chacón, Santiago Marco-Sola, Antonio Espinosa, Paolo Ribeca, Juan Carlos Moure
2011 J jnl
Computational challenges of sequence classification in microbiomic data.
Briefings Bioinform.
Paolo Ribeca, Gabriel Valiente
2010 J jnl
A more precise characterization of chaperonin substrates.
Bioinform.
Emanuele Raineri, Paolo Ribeca, Luis Serrano, Tobias Maier
2008 J jnl
Faster exact Markovian probability functions for motif occurrences: a DFA-only approach.
Bioinform.
Paolo Ribeca, Emanuele Raineri