Paola Vera-Licona

12 papers Journal 12
YearRankTypeTitle / Venue / Authors
2020 J jnl
OCSANA+: optimal control and simulation of signaling networks from network analysis.
Bioinform.
Lauren Marazzi, Andrew Gainer-Dewar, Paola Vera-Licona
2019 J jnl
Benchmarking time-series data discretization on inference methods.
Bioinform.
Yuezhe Li, Tiffany Jann, Paola Vera-Licona
2017 J jnl
The Minimal Hitting Set Generation Problem: Algorithms and Computation.
SIAM J. Discret. Math.
Andrew Gainer-Dewar, Paola Vera-Licona
2016 J jnl
AlgoRun: a Docker-based packaging system for platform-agnostic implemented algorithms.
Bioinform.
Abdelrahman Hosny, Paola Vera-Licona, Reinhard C. Laubenbacher, Thibauld Favre
2016 J jnl
QuIN: A Web Server for Querying and Visualizing Chromatin Interaction Networks.
PLoS Comput. Biol.
Asa Thibodeau, Eladio J. Márquez, Oscar Luo, Yijun Ruan, Francesca Menghi, Dong-Guk Shin, Michael L. Stitzel, Paola Vera-Licona, Duygu Ucar
2016 J jnl
The minimal hitting set generation problem: algorithms and computation.
CoRR
Andrew Gainer-Dewar, Paola Vera-Licona
2014 J jnl
An Algebra-Based Method for Inferring Gene Regulatory Networks.
BMC Syst. Biol.
Paola Vera-Licona, Abdul Salam Jarrah, Luis David García-Puente, John McGee, Reinhard C. Laubenbacher
2013 J jnl
OCSANA: optimal combinations of interventions from network analysis.
Bioinform.
Paola Vera-Licona, Eric Bonnet, Emmanuel Barillot, Andrei Yu. Zinovyev
2012 J jnl
TIGRESS: Trustful Inference of Gene REgulation using Stability Selection.
BMC Syst. Biol.
Anne-Claire Haury, Fantine Mordelet, Paola Vera-Licona, Jean-Philippe Vert
2011 J jnl
Parameter estimation for Boolean models of biological networks.
Theor. Comput. Sci.
Elena S. Dimitrova, Luis David García-Puente, Franziska Hinkelmann, Abdul Salam Jarrah, Reinhard C. Laubenbacher, Brandilyn Stigler, Michael Eugene Stillman, Paola Vera-Licona
2011 J jnl
Reverse Engineering of Molecular Networks from a Common Combinatorial Approach
CoRR
Bhaskar DasGupta, Paola Vera-Licona, Eduardo D. Sontag
2010 J jnl
Discretization of Time Series Data.
J. Comput. Biol.
Elena S. Dimitrova, Paola Vera-Licona, John McGee, Reinhard C. Laubenbacher