Padmini Rangamani

17 papers Journal 17
YearRankTypeTitle / Venue / Authors
2026 J jnl
Dynamics of the formation of flat clathrin lattices in response to growth factor stimulus.
PLoS Comput. Biol.
Lingxia Qiao, Marco A. Alfonzo-Méndez, Justin W. Taraska, Padmini Rangamani
2025 J jnl
A Finite Element framework for bulk-surface coupled PDEs to solve moving boundary problems in biophysics.
CoRR
Alessandro Contri, André Massing, Padmini Rangamani
2025 J jnl
Author Correction: Spatial modeling algorithms for reactions and transport in biological cells.
Nat. Comput. Sci.
Emmet A. Francis, Justin G. Laughlin, Jørgen S. Dokken, Henrik Nicolay Topnes Finsberg, Christopher T. Lee, Marie E. Rognes, Padmini Rangamani
2025 J jnl
Spatial modeling algorithms for reactions and transport in biological cells.
Nat. Comput. Sci.
Emmet A. Francis, Justin G. Laughlin, Jørgen S. Dokken, Henrik Nicolay Topnes Finsberg, Christopher T. Lee, Marie E. Rognes, Padmini Rangamani
2024 J jnl
Modeling cardiomyocyte signaling and metabolism predicts genotype-to-phenotype mechanisms in hypertrophic cardiomyopathy.
Comput. Biol. Medicine
Ali Khalilimeybodi, Jeffrey J. Saucerman, Padmini Rangamani
2024 J jnl
Spatiotemporal orchestration of calcium-cAMP oscillations on AKAP/AC nanodomains is governed by an incoherent feedforward loop.
PLoS Comput. Biol.
Lingxia Qiao, Michael Getz, Ben Gross, Brian Tenner, Jin Zhang, Padmini Rangamani
2023 J jnl
Correction: Bayesian parameter estimation for dynamical models in systems biology.
PLoS Comput. Biol.
Nathaniel J. Linden, Boris Kramer, Padmini Rangamani
2023 J jnl
Effective cell membrane tension protects red blood cells against malaria invasion.
PLoS Comput. Biol.
Haleh Alimohamadi, Padmini Rangamani
2023 J jnl
SMART: Spatial Modeling Algorithms for Reactions and Transport.
J. Open Source Softw.
Justin G. Laughlin, Jørgen S. Dokken, Henrik Nicolay Topnes Finsberg, Emmet A. Francis, Christopher T. Lee, Marie E. Rognes, Padmini Rangamani
2022 J jnl
Bayesian parameter estimation for dynamical models in systems biology.
PLoS Comput. Biol.
Nathaniel J. Linden, Boris Kramer, Padmini Rangamani
2022 J jnl
Nanoscale organization of ryanodine receptor distribution and phosphorylation pattern determines the dynamics of calcium sparks.
PLoS Comput. Biol.
María Hernández Mesa, Jonas van den Brink, William E. Louch, Kimberly J. McCabe, Padmini Rangamani
2021 J jnl
Mem3DG: Modeling Membrane Mechanochemical Dynamics in 3D using Discrete Differential Geometry.
CoRR
Cuncheng Zhu, Christopher T. Lee, Padmini Rangamani
2020 J jnl
3D mesh processing using GAMer 2 to enable reaction-diffusion simulations in realistic cellular geometries.
PLoS Comput. Biol.
Christopher T. Lee, Justin G. Laughlin, Nils Angliviel de La Beaumelle, Rommie E. Amaro, James Andrew McCammon, Ravi Ramamoorthi, Michael J. Holst, Padmini Rangamani
2020 J jnl
Interactions between calmodulin and neurogranin govern the dynamics of CaMKII as a leaky integrator.
PLoS Comput. Biol.
Mariam Ordyan, Tom Bartol, Mary B. Kennedy, Padmini Rangamani, Terrence J. Sejnowski
2020 J jnl
Local sensitivity analysis of the 'Membrane shape equation' derived from the Helfrich energy.
CoRR
Padmini Rangamani, Ali Behzadan, Michael J. Holst
2020 J jnl
Non-uniform distribution of myosin-mediated forces governs red blood cell membrane curvature through tension modulation.
PLoS Comput. Biol.
Haleh Alimohamadi, Alyson S. Smith, Roberta B. Nowak, Velia M. Fowler, Padmini Rangamani
2020 J jnl
Ten simple rules for women principal investigators during a pandemic.
PLoS Comput. Biol.
Pamela K. Kreeger, Amy Brock, Holly C. Gibbs, K. Jane Grande-Allen, Alice H. Huang, Kristyn S. Masters, Padmini Rangamani, Michaela R. Reagan, Shannon L. Servoss