Pablo Minguez

20 papers Journal 20
YearRankTypeTitle / Venue / Authors
2021 J jnl
CSVS, a crowdsourcing database of the Spanish population genetic variability.
Nucleic Acids Res.
María Peña-Chilet, Gema Roldán, Javier Perez-Florido, Francisco M. Ortuño, Rosario Carmona, Virginia Aquino, Daniel López-López, Carlos Loucera, Jose Luis Fernandez-Rueda, Asunción Gallego, Francisco García-García, Anna González-Neira, Guillermo Pita, Rocío Núñez-Torres, Javier Santoyo-Lopez, Carmen Ayuso, Pablo Minguez, Almudena Avila-Fernandez, Marta Corton, Miguel Ángel Moreno-Pelayo, Matías Morin, Alvaro Gallego-Martinez, Jose A. Lopez-Escamez, Salud Borrego, Guillermo Antiñolo, Jorge Amigo, Josefa Salgado-Garrido, Sara Pasalodos-Sanchez, Beatriz Morte, Fátima Al-Shahrour, Rafael Artuch, Javier Benitez, Luis Antonio Castaño, Ignacio Del Castillo, Aitor Delmiro, Carmina Espinos, Roser González, Daniel Grinberg, Encarnación Guillén, Pablo Lapunzina, Esther López, Ramon Martí, Montserrat Milá, Jose M. Millán, Virginia Nunes, Francesc Palau, Belen Perez, Luis A. Pérez-Jurado, Rosario Perona, Aurora Pujol, Feliciano Ramos, Antonia Ribes, Jordi Rosell, Eulalia Rovira, Jordi Surrallés, Isabel Tejada, Magdalena Ugarte, Ángel Carracedo, Ángel Alonso, Joaquín Dopazo
2017 J jnl
Systematic identification of phosphorylation-mediated protein interaction switches.
PLoS Comput. Biol.
Matthew J. Betts, Oliver Wichmann, Mathias Utz, Timon Andre, Evangelia Petsalaki, Pablo Minguez, Luca Parca, Frederick P. Roth, Anne-Claude Gavin, Peer Bork, Robert B. Russell
2015 J jnl
PTMcode v2: a resource for functional associations of post-translational modifications within and between proteins.
Nucleic Acids Res.
Pablo Minguez, Ivica Letunic, Luca Parca, Luz Garcia-Alonso, Joaquín Dopazo, Jaime Huerta-Cepas, Peer Bork
2014 J jnl
Understanding disease mechanisms with models of signaling pathway activities.
BMC Syst. Biol.
Patricia Sebastián-León, Enrique Vidal, Pablo Minguez, Ana Conesa, Sonia Tarazona, Alicia Amadoz, Carmen Armero, Francisco Salavert, Antonio Vidal-Puig, David Montaner, Joaquín Dopazo
2013 J jnl
PTMcode: a database of known and predicted functional associations between post-translational modifications in proteins.
Nucleic Acids Res.
Pablo Minguez, Ivica Letunic, Luca Parca, Peer Bork
2013 J jnl
STRING v9.1: protein-protein interaction networks, with increased coverage and integration.
Nucleic Acids Res.
Andrea Franceschini, Damian Szklarczyk, Sune Frankild, Michael Kuhn, Milan Simonovic, Alexander Roth, Jianyi Lin, Pablo Minguez, Peer Bork, Christian von Mering, Lars Juhl Jensen
2012 J jnl
OGEE: an online gene essentiality database.
Nucleic Acids Res.
Wei-Hua Chen, Pablo Minguez, Martin J. Lercher, Peer Bork
2012 J jnl
Protein Interactions for Functional Genomics.
Int. J. Knowl. Discov. Bioinform.
Pablo Minguez, Joaquín Dopazo
2011 J jnl
The STRING database in 2011: functional interaction networks of proteins, globally integrated and scored.
Nucleic Acids Res.
Damian Szklarczyk, Andrea Franceschini, Michael Kuhn, Milan Simonovic, Alexander Roth, Pablo Minguez, Tobias Doerks, Manuel Stark, Jean Muller, Peer Bork, Lars Juhl Jensen, Christian von Mering
2010 J jnl
Selection upon Genome Architecture: Conservation of Functional Neighborhoods with Changing Genes.
PLoS Comput. Biol.
Fátima Al-Shahrour, Pablo Minguez, Tomàs Marquès-Bonet, Elodie Gazave, Arcadi Navarro, Joaquín Dopazo
2009 J jnl
SNOW, a web-based tool for the statistical analysis of protein-protein interaction networks.
Nucleic Acids Res.
Pablo Minguez, Stefan Götz, David Montaner, Fátima Al-Shahrour, Joaquín Dopazo
2008 J jnl
Babelomics: advanced functional profiling of transcriptomics, proteomics and genomics experiments.
Nucleic Acids Res.
Fátima Al-Shahrour, José Carbonell, Pablo Minguez, Stefan Götz, Ana Conesa, Joaquín Tárraga, Ignacio Medina, Eva Alloza, David Montaner, Joaquín Dopazo
2008 J jnl
GEPAS, a web-based tool for microarray data analysis and interpretation.
Nucleic Acids Res.
Joaquín Tárraga, Ignacio Medina, José Carbonell, Jaime Huerta-Cepas, Pablo Minguez, Eva Alloza, Fátima Al-Shahrour, Susana Vegas-Azcárate, Stefan Götz, Pablo Escobar, Francisco García-García, Ana Conesa, David Montaner, Joaquín Dopazo
2007 J jnl
FatiGO +: a functional profiling tool for genomic data. Integration of functional annotation, regulatory motifs and interaction data with microarray experiments.
Nucleic Acids Res.
Fátima Al-Shahrour, Pablo Minguez, Joaquín Tárraga, Ignacio Medina, Eva Alloza, David Montaner, Joaquín Dopazo
2007 J jnl
From genes to functional classes in the study of biological systems.
BMC Bioinform.
Fátima Al-Shahrour, Leonardo Arbiza, Hernán Dopazo, Jaime Huerta-Cepas, Pablo Minguez, David Montaner, Joaquín Dopazo
2007 J jnl
Functional profiling of microarray experiments using text-mining derived bioentities.
Bioinform.
Pablo Minguez, Fátima Al-Shahrour, David Montaner, Joaquín Dopazo
2006 J jnl
BABELOMICS: a systems biology perspective in the functional annotation of genome-scale experiments.
Nucleic Acids Res.
Fátima Al-Shahrour, Pablo Minguez, Joaquín Tárraga, David Montaner, Eva Alloza, Juan M. Vaquerizas, Lucía Conde, Christian Blaschke, Javier Vera, Joaquín Dopazo
2006 J jnl
Next station in microarray data analysis: GEPAS.
Nucleic Acids Res.
David Montaner, Joaquín Tárraga, Jaime Huerta-Cepas, Jordi Burguet-Castell, Juan M. Vaquerizas, Lucía Conde, Pablo Minguez, Javier Vera, Sach Mukherjee, Joan Valls, Miguel A. G. Pujana, Eva Alloza, Javier Herrero, Fátima Al-Shahrour, Joaquín Dopazo
2005 J jnl
BABELOMICS: a suite of web tools for functional annotation and analysis of groups of genes in high-throughput experiments.
Nucleic Acids Res.
Fátima Al-Shahrour, Pablo Minguez, Juan M. Vaquerizas, Lucía Conde, Joaquín Dopazo
2005 J jnl
GEPAS, an experiment-oriented pipeline for the analysis of microarray gene expression data.
Nucleic Acids Res.
Juan M. Vaquerizas, Lucía Conde, Patricio Yankilevich, Amaya Cabezón, Pablo Minguez, Ramón Díaz-Uriarte, Fátima Al-Shahrour, Javier Herrero, Joaquín Dopazo