Pablo Chacón

25 papers C 2Journal 20Unranked 2
YearRankTypeTitle / Venue / Authors
2023 J jnl
Predicting protein stability changes upon mutation using a simple orientational potential.
Bioinform.
Iván Martín Hernández, Yves Dehouck, Ugo Bastolla, José Ramón López-Blanco, Pablo Chacón
2022 J jnl
Local Normal Mode Analysis for Fast Loop Conformational Sampling.
J. Chem. Inf. Model.
José Ramón López-Blanco, Yves Dehouck, Ugo Bastolla, Pablo Chacón
2022 J jnl
Proposed Practical Overheight Detection and Alert System.
Autom. Control. Comput. Sci.
A. M. Aly, Pablo Chacón, H. Gol-Zaroudi, Jin-Woo Choi, George Z. Voyiadjis
2022 — conf
Using a Graph Transformer Network to Predict 3D Coordinates of Proteins via Geometric Algebra Modelling.
ENGAGE
Alberto Pepe, Joan Lasenby, Pablo Chacón
2021 J jnl
Atomic-level evolutionary information improves protein-protein interface scoring.
Bioinform.
Chloé Quignot, Pierre Granger, Pablo Chacón, Raphaël Guérois, Jessica Andreani
2021 J jnl
InterEvDock3: a combined template-based and free docking server with increased performance through explicit modeling of complex homologs and integration of covariation-based contact maps.
Nucleic Acids Res.
Chloé Quignot, Guillaume Postic, Hélène Bret, Julien Rey, Pierre Granger, Samuel Murail, Pablo Chacón, Jessica Andreani, Pierre Tufféry, Raphaël Guérois
2021 J jnl
KORP-PL: a coarse-grained knowledge-based scoring function for protein-ligand interactions.
Bioinform.
Maria Kadukova, Karina dos Santos Machado, Pablo Chacón, Sergei Grudinin
2019 J jnl
KORP: knowledge-based 6D potential for fast protein and loop modeling.
Bioinform.
José Ramón López-Blanco, Pablo Chacón
2016 J jnl
A fast band-Krylov eigensolver for macromolecular functional motion simulation on multicore architectures and graphics processors.
J. Comput. Phys.
José Ignacio Aliaga, Pedro Alonso, José M. Badía, Pablo Chacón, Davor Davidovic, José Ramón López-Blanco, Enrique S. Quintana-Ortí
2016 J jnl
FRODOCK 2.0: fast protein-protein docking server.
Bioinform.
Erney Ramírez-Aportela, José Ramón López-Blanco, Pablo Chacón
2016 J jnl
RCD+: Fast loop modeling server.
Nucleic Acids Res.
José Ramón López-Blanco, Alejandro Jesús Canosa-Valls, Yaohang Li, Pablo Chacón
2014 C conf
FRODRUG: A Virtual Screening GPU Accelerated Approach for Drug Discovery.
PDP
Santiago Garcia Sanchez, Erney Ramírez-Aportela, José Ignacio Garzón, Pablo Chacón, Antonio S. Montemayor, Raúl Cabido
2014 J jnl
iMODS: internal coordinates normal mode analysis server.
Nucleic Acids Res.
José Ramón López-Blanco, José Ignacio Aliaga, Enrique S. Quintana-Ortí, Pablo Chacón
2013 J jnl
Exploring large macromolecular functional motions on clusters of multicore processors.
J. Comput. Phys.
José Ramón López-Blanco, Ruymán Reyes, José Ignacio Aliaga, Rosa M. Badia, Pablo Chacón, Enrique S. Quintana-Ortí
2012 J jnl
Spinor product computations for protein conformations.
J. Comput. Chem.
Pieter Chys, Pablo Chacón
2011 J jnl
iMod: multipurpose normal mode analysis in internal coordinates.
Bioinform.
José Ramón López-Blanco, José Ignacio Garzón, Pablo Chacón
2010 J jnl
End-To-End Cache System for Grid Computing: Design and Efficiency Analysis of a High-Throughput Bioinformatic Docking Application.
Int. J. High Perform. Comput. Appl.
José Ignacio Garzón, Eduardo Huedo, Rubén Santiago Montero, Ignacio Martín Llorente, Pablo Chacón
2009 J jnl
FRODOCK: a new approach for fast rotational protein-protein docking.
Bioinform.
José Ignacio Garzón, José Ramón López-Blanco, Carles Pons, Julio A. Kovacs, Ruben Abagyan, Juan Fernández-Recio, Pablo Chacón
2007 J jnl
ADP_EM: fast exhaustive multi-resolution docking for high-throughput coverage.
Bioinform.
José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón
2007 J jnl
Adaptation of a Multi-Resolution Docking Bioinformatics Application to the Grid.
J. Softw.
José Ignacio Garzón, Eduardo Huedo, Rubén S. Montero, Ignacio Martín Llorente, Pablo Chacón
2007 J jnl
DFprot: a webtool for predicting local chain deformability.
Bioinform.
José Ignacio Garzón, Julio A. Kovacs, Ruben Abagyan, Pablo Chacón
2007 C conf
Grid Multi-Resolution Docking.
PDP
José Ignacio Garzón, Eduardo Huedo, Rubén S. Montero, Ignacio Martín Llorente, Pablo Chacón
2004 J jnl
Topology representing neural networks reconcile biomolecular shape, structure, and dynamics.
Neurocomputing
Willy Wriggers, Pablo Chacón, Julio A. Kovacs, Florence Tama, Stefan Birmanns
1995 — ed.
Advances in Artificial Life, Third European Conference on Artificial Life, Granada, Spain, June 4-6, 1995, Proceedings
ECAL
Federico Morán, Alvaro Moreno, Juan Julián Merelo Guervós, Pablo Chacón
1995 — conf
Compartimentation in Replicator Models.
ECAL
Juan Carlos Nuño, Pablo Chacón, Alvaro Moreno, Federico Morán