Oya Beyan - RankMe

64 papers B 1C 1Journal 29Unranked 33

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	Catnip for MedCAT: Optimizing the Input for Automated SNOMED CT Mapping of Clinical Variables. GMDS Julia Gehrmann, Asme Dogan, Lea Hagelschuer, Lars Quakulinski, Anne Koy, Oya Beyan
2025	—	`conf`	Implementation of HL7 FHIR-Based Terminology Services for a National Federated Health Research Infrastructure. GMDS Joshua Wiedekopf, Tessa Ohlsen, Alan Koops, Ann-Kristin Kock-Schoppenhauer, Muhammad Adnan, Sarah Ballout, Nele Philipzik, Oya Beyan, Andreas Beyer, Michael Marschollek, Josef Ingenerf
2024	J	`jnl`	Challenges of Entrepreneurship Teaching in the Healthtech and Medtech Domains: Some Inputs for a New Approach. Int. J. Online Biomed. Eng. Adamantios Koumpis, Arminda Maria Finisterra do Paço, Oya Beyan
2024	—	`conf`	Cybersecurity Frameworks in Healthcare Data: Short Literature Review. MIE Muhammad Adnan, Ekaterina Kutafina, Oya Beyan
2024	—	`conf`	Data Quality in Medical Real-World Data - An Oncological Use Case. MIE Julia Gehrmann, Oya Beyan
2024	—	`conf`	Early Multimodal Data Integration for Data-Driven Medical Research - A Scoping Review. GMDS Julia Gehrmann, Oya Beyan
2024	—	`conf`	FDO Manager: Minimum Viable FAIR Digital Object Implementation. FDO Oussama Zoubia, Nagaraj Bahubali Asundi, Adamantios Koumpis, Christoph Lange, Sezin Dogan, Oya Beyan, Zeyd Boukhers
2024	J	`jnl`	FDO Manager: Minimum Viable FAIR Digital Object Implementation. CoRR Oussama Zoubia, Zeyd Boukhers, Nagaraj Bahubali Asundi, Sezin Dogan, Adamantios Koumpis, Christoph Lange, Oya Beyan
2024	—	`conf`	Harmonizing Microneurography Metadata with Local Data Hubs: A Concept. MIE Barbara Namer, Alina Troglio, Toralf Kirsten, Oya Beyan, Ekaterina Kutafina
2024	—	`conf`	How Data Infrastructure Deals with Bias Problems in Medical Imaging. MIE Feifei Li, Ekaterina Kutafina, Mirjam Schöneck, Liliana Lourenco Caldeira, Oya Beyan
2024	J	`jnl`	Identification of Medical Ecosystems in the Field of Mental Health and Cardiovascular Diseases at the Cologne Site. Int. J. Online Biomed. Eng. Cara Dannenberg, Johannes Heimann, Adamantios Koumpis, Oya Beyan
2024	J	`jnl`	Improved Gradient Inversion Attacks and Defenses in Federated Learning. IEEE Trans. Big Data Jiahui Geng, Yongli Mou, Qing Li, Feifei Li, Oya Beyan, Stefan Decker, Chunming Rong
2024	—	`conf`	Large Language Models for Literature Reviews - An Exemplary Comparison of LLM-based Approaches with Manual Methods. FLLM Julia Gehrmann, Lars Quakulinski, Oya Beyan
2024	—	`conf`	Real-Time Visualization and Analysis Architecture for Data Integration Processes at Cologne University Hospital's Medical Data Integration Center. MIE Md. Mostafa Kamal, Ekaterina Kutafina, Oya Beyan
2024	—	`conf`	Review of Key Elements in Developing a Common Data Model for Rare Diseases: Identifying Common Success Factors. MIE Filip Rehburg, Miriam Hübner, Sylvia Thun, Oya Beyan
2024	—	`conf`	Semi-Automatic Export of Electrophysiological Metadata to NFDI4Health Local Data Hubs: Use Case of Microneurography odML-Tables - A Technical Case Report. GMDS Alina Troglio, Masoud Abedi, Martin Golebiewski, Frank A. Meineke, Toralf Kirsten, Barbara Namer, Oya Beyan, Ekaterina Kutafina
2024	J	`jnl`	Voxel-Wise Medical Image Generalization for Eliminating Distribution Shift. ACM Trans. Knowl. Discov. Data Feifei Li, Yuanbin Wang, Oya Beyan, Mirjam Schöneck, Liliana Lourenco Caldeira
2023	J	`jnl`	A Biomedical Knowledge Graph for Biomarker Discovery in Cancer. CoRR Md. Rezaul Karim, Lina Molinas Comet, Oya Beyan, Dietrich Rebholz-Schuhmann, Stefan Decker
2023	—	`conf`	Analyzing Distributed Medical Data in FAIR Data Spaces. WWW (Companion Volume) Mehrshad Jaberansary, Macedo Maia, Yeliz Ucer Yediel, Oya Beyan, Toralf Kirsten
2023	—	`conf`	Breaking Barriers for Interoperability: A Reference Implementation of CSV-FHIR Transformation Using Open-Source Tools. MIE Samer Alkarkoukly, Md. Mostafa Kamal, Oya Beyan
2023	—	`conf`	Distributed Privacy-Preserving Data Analysis in NFDI4Health With the Personal Health Train. CoRDI Yongli Mou, Feifei Li, Sven Weber, Sabith Haneef, Hans Meine, Liliana Caldeira, Mehrshad Jaberansary, Sascha Welten, Yeliz Ucer Yediel, Guido P. M. Prause, Stefan Decker, Oya Beyan, Toralf Kirsten
2023	—	`conf`	Enhancing Data Space Semantic Interoperability through Machine Learning: a Visionary Perspective. WWW (Companion Volume) Zeyd Boukhers, Christoph Lange, Oya Beyan
2023	J	`jnl`	Enhancing Data Space Semantic Interoperability through Machine Learning: a Visionary Perspective. CoRR Zeyd Boukhers, Christoph Lange, Oya Beyan
2023	J	`jnl`	Explainable AI for Bioinformatics: Methods, Tools and Applications. Briefings Bioinform. Md. Rezaul Karim, Tanhim Islam, Md Shajalal, Oya Beyan, Christoph Lange, Michael Cochez, Dietrich Rebholz-Schuhmann, Stefan Decker
2023	J	`jnl`	From Large Language Models to Knowledge Graphs for Biomarker Discovery in Cancer. CoRR Md. Rezaul Karim, Lina Molinas Comet, Md Shajalal, Oya Beyan, Dietrich Rebholz-Schuhmann, Stefan Decker
2023	—	`conf`	Integrating Cross-Departmental Data. MIE Julia Gehrmann, Oya Beyan
2023	—	`conf`	PADME-SoSci: A Platform for Analytics and Distributed Machine Learning for the Social Sciences. JCDL Zeyd Boukhers, Arnim Bleier, Yeliz Ucer Yediel, Mio Hienstorfer-Heitmann, Mehrshad Jaberansary, Sascha Welten, Adamantios Koumpis, Oya Beyan
2023	J	`jnl`	PADME-SoSci: A Platform for Analytics and Distributed Machine Learning for the Social Sciences. CoRR Zeyd Boukhers, Arnim Bleier, Yeliz Ucer Yediel, Mio Hienstorfer-Heitmann, Mehrshad Jaberansary, Adamantios Koumpis, Oya Beyan
2023	J	`jnl`	Performance and limitations of a supervised deep learning approach for the histopathological Oxford Classification of glomeruli with IgA nephropathy. Comput. Methods Programs Biomed. Nicola Altini, Michele Rossini, Sándor Turkevi-Nagy, Francesco Pesce, Paola Pontrelli, Berardino Prencipe, Francesco Berloco, Surya Seshan, Jean-Baptiste Gibier, Aníbal Pedraza Dorado, Gloria Bueno, Licia Peruzzi, Mattia Rossi, Albino Eccher, Feifei Li, Adamantios Koumpis, Oya Beyan, Jonathan Barratt, Huy Quoc Vo, Chandra Mohan, Hien Van Nguyen, Pietro Antonio Cicalese, Angela Ernst, Loreto Gesualdo, Vitoantonio Bevilacqua, Jan Ulrich Becker
2023	J	`jnl`	Stakeholders of Cardiovascular Innovation Ecosystems in Germany: A First Level Analysis and an Example. Int. J. Online Biomed. Eng. Stanislav Kirichenko, Adamantios Koumpis, Oya Beyan
2023	B	`conf`	Towards FAIR Data in Distributed Machine Learning Systems. GLOBECOM Yongli Mou, Fengyang Guo, Wei Lu, Yongzhao Li, Oya Beyan, Thomas Rose, Schahram Dustdar, Stefan Decker
2023	—	`conf`	Voxel-Wise Medical Imaging Transformation and Adaption Based on CycleGAN and Score-Based Diffusion. MIE Feifei Li, Mirjam Schöneck, Oya Beyan, Liliana Lourenco Caldeira
2023	—	`conf`	pFedV: Mitigating Feature Distribution Skewness via Personalized Federated Learning with Variational Distribution Constraints. PAKDD (2) Yongli Mou, Jiahui Geng, Feng Zhou, Oya Beyan, Chunming Rong, Stefan Decker
2022	J	`jnl`	Convolutional Embedded Networks for Population Scale Clustering and Bio-Ancestry Inferencing. IEEE ACM Trans. Comput. Biol. Bioinform. Md. Rezaul Karim, Michael Cochez, Achille Zappa, Ratnesh Sahay, Dietrich Rebholz-Schuhmann, Oya Beyan, Stefan Decker
2022	J	`jnl`	Explainable AI for Bioinformatics: Methods, Tools, and Applications. CoRR Md. Rezaul Karim, Tanhim Islam, Oya Beyan, Christoph Lange, Michael Cochez, Dietrich Rebholz-Schuhmann, Stefan Decker
2022	—	`conf`	NFDI4DataScience registry for reproducible Data Science and Artificial Intelligence. WOOC Leyla Jael Castro, Zeyd Boukhers, Olga L. Giraldo, Adamantios Koumpis, Oya Beyan, Dietrich Rebholz-Schuhmann
2021	J	`jnl`	DAMS: A Distributed Analytics Metadata Schema. Data Intell. Sascha Welten, Laurenz Neumann, Yeliz Ucer Yediel, Luiz Olavo Bonino da Silva Santos, Stefan Decker, Oya Beyan
2021	J	`jnl`	Deep learning-based clustering approaches for bioinformatics. Briefings Bioinform. Md. Rezaul Karim, Oya Beyan, Achille Zappa, Ivan G. Costa, Dietrich Rebholz-Schuhmann, Michael Cochez, Stefan Decker
2021	J	`jnl`	DeepKneeExplainer: Explainable Knee Osteoarthritis Diagnosis From Radiographs and Magnetic Resonance Imaging. IEEE Access Md. Rezaul Karim, Jiao Jiao, Till Döhmen, Michael Cochez, Oya Beyan, Dietrich Rebholz-Schuhmann, Stefan Decker
2021	—	`conf`	Distributed Skin Lesion Analysis Across Decentralised Data Sources. MIE Yongli Mou, Sascha Welten, Mehrshad Jaberansary, Yeliz Ucer Yediel, Toralf Kirsten, Stefan Decker, Oya Beyan
2021	—	`conf`	FAIRness for FHIR: Towards Making Health Datasets FAIR Using HL7 FHIR. MedInfo Alicia Martinez-García, Giorgio Cangioli, Catherine E. Chronaki, Matthias Löbe, Oya Beyan, Anthony Juehne, Carlos Luis Parra Calderón
2021	—	`conf`	Optimized Federated Learning on Class-Biased Distributed Data Sources. PKDD/ECML Workshops (1) Yongli Mou, Jiahui Geng, Sascha Welten, Chunming Rong, Stefan Decker, Oya Beyan
2021	J	`jnl`	Towards General Deep Leakage in Federated Learning. CoRR Jiahui Geng, Yongli Mou, Feifei Li, Qing Li, Oya Beyan, Stefan Decker, Chunming Rong
2020	J	`jnl`	A snapshot neural ensemble method for cancer-type prediction based on copy number variations. Neural Comput. Appl. Md. Rezaul Karim, Ashiqur Rahman, Joao Bosco Jares, Stefan Decker, Oya Beyan
2020	J	`jnl`	Biases in Data Science Lifecycle. CoRR Dinh-An Ho, Oya Beyan
2020	—	`conf`	DeepCOVIDExplainer: Explainable COVID-19 Diagnosis from Chest X-ray Images. BIBM Md. Rezaul Karim, Till Döhmen, Michael Cochez, Oya Beyan, Dietrich Rebholz-Schuhmann, Stefan Decker
2020	J	`jnl`	DeepCOVIDExplainer: Explainable COVID-19 Predictions Based on Chest X-ray Images. CoRR Md. Rezaul Karim, Till Döhmen, Dietrich Rebholz-Schuhmann, Stefan Decker, Michael Cochez, Oya Beyan
2020	J	`jnl`	Distributed Analytics on Sensitive Medical Data: The Personal Health Train. Data Intell. Oya Beyan, Ananya Choudhury, Johan van Soest, Oliver Kohlbacher, Lukas Zimmermann, Holger Stenzhorn, Md. Rezaul Karim, Michel Dumontier, Stefan Decker, Luiz Olavo Bonino da Silva Santos, Andre Dekker
2020	J	`jnl`	Enabling ad-hoc reuse of private data repositories through schema extraction. J. Biomed. Semant. Lars Christoph Gleim, Md. Rezaul Karim, Lukas Zimmermann, Oliver Kohlbacher, Holger Stenzhorn, Stefan Decker, Oya Beyan
2020	J	`jnl`	Helping the Consumers and Producers of Standards, Repositories and Policies to Enable FAIR Data. Data Intell. Peter McQuilton, Dominique Batista, Oya Beyan, Ramón Granell, Simon J. Coles, Massimiliano Izzo, Allyson L. Lister, Robert Pergl, Philippe Rocca-Serra, Ben Schaap, Hugh P. Shanahan, Milo Thurston, Susanna-Assunta Sansone
2019	—	`conf`	Design of Metadata Services for Clinical Data Interoperability in Germany. MedInfo Matthias Löbe, Oya Beyan, Sebastian Stäubert, Frank A. Meineke, Danny Ammon, Alfred Winter, Stefan Decker, Markus Löffler, Toralf Kirsten
2019	—	`conf`	Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network. BCB Md. Rezaul Karim, Michael Cochez, Joao Bosco Jares, Mamtaz Uddin, Oya Beyan, Stefan Decker
2019	J	`jnl`	Drug-Drug Interaction Prediction Based on Knowledge Graph Embeddings and Convolutional-LSTM Network. CoRR Md. Rezaul Karim, Michael Cochez, Joao Bosco Jares, Mamtaz Uddin, Oya Beyan, Stefan Decker
2019	—	`conf`	Implementation of Clinical Decision Support Services to Detect Potential Drug-Drug Interaction Using Clinical Quality Language. MedInfo Binh-Phi Nguyen, Thomas J. Reese, Stefan Decker, Daniel C. Malone, Richard D. Boyce, Oya Beyan
2019	C	`conf`	OncoNetExplainer: Explainable Predictions of Cancer Types Based on Gene Expression Data. BIBE Md. Rezaul Karim, Michael Cochez, Oya Beyan, Stefan Decker, Christoph Lange
2019	J	`jnl`	OncoNetExplainer: Explainable Predictions of Cancer Types Based on Gene Expression Data. CoRR Md. Rezaul Karim, Michael Cochez, Oya Beyan, Stefan Decker, Christoph Lange
2019	J	`jnl`	Prognostically Relevant Subtypes and Survival Prediction for Breast Cancer Based on Multimodal Genomics Data. IEEE Access Md. Rezaul Karim, Galih Wicaksono, Ivan G. Costa, Stefan Decker, Oya Beyan
2018	—	`conf`	A distributed analytics platform to execute FHIR based phenotyping algorithms. SWAT4LS Md. Rezaul Karim, Binh-Phi Nguyen, Lukas Zimmermann, Toralf Kirsten, Matthias Löbe, Frank A. Meineke, Holger Stenzhorn, Oliver Kohlbacher, Stefan Decker, Oya Beyan
2018	J	`jnl`	Recurrent Deep Embedding Networks for Genotype Clustering and Ethnicity Prediction. CoRR Md. Rezaul Karim, Michael Cochez, Oya Beyan, Achille Zappa, Ratnesh Sahay, Stefan Decker, Dietrich Rebholz-Schuhmann
2018	—	`conf`	Research Data in the Fraunhofer Digital Project: Creating a FAIR Research Data Infrastructure and Culture. RO Oya Beyan, Andrea Wuchner, Dirk Eisengräber-Pabst, Christoph Quix, Christian Zaschke, Oliver Schumacher
2017	—	`conf`	Towards a FAIR Sharing of Scientific Experiments: Improving Discoverability and Reusability of Dielectric Measurements of Biological Tissues. SWAT4LS Md. Rezaul Karim, Matthias Heinrichs, Lars Christoph Gleim, Michael Cochez, Emily Porter, Alessandra La Gioia, Saqib Salahuddin, Stefan Decker, Martin O'Halloran, Oya Beyan
2016	—	`conf`	An RDF Based Semantic Approach to Model Temporal Relations in Health Records. SWAT4LS Oya Beyan, Stefan Decker
2015	—	`conf`	Historical Data Preservation and Interpretation Pipeline for Irish Civil Registration Records. OTM Workshops Oya Beyan, P. J. Mealy, Dolores Grant, Rebecca Grant, Natalie Harrower, Ciara Breathnach, Sandra Collins, Stefan Decker
2015	J	`jnl`	Implementing an ethical approach to big data analytics in assistive robotics for elderly with dementia. SIGCAS Comput. Soc. Heike Felzmann, Timur Beyan, Mark Ryan, Oya Beyan