Ottavia Spiga - RankMe

14 papers Journal 14

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Knowledge Graph Extraction from Biomedical Literature for Alkaptonuria Rare Disease. CoRR Giang Pham, Rebecca Finetti, Caterina Graziani, Bianca Roncaglia, Asma Bendjeddou, Linda Brodo, Sara Brunetti, Moreno Falaschi, Stefano Forti, Silvia Giulia Galfrè, Paolo Milazzo, Corrado Priami, Annalisa Santucci, Ottavia Spiga, Alina Sîrbu
2025	J	`jnl`	Machine Learning for Predicting the Drug-to-Antibody Ratio (DAR) in the Synthesis of Antibody-Drug Conjugates (ADCs). J. Chem. Inf. Model. Lorenzo Angiolini, Fabrizio Manetti, Ottavia Spiga, Andrea Tafi, Anna Visibelli, Elena Petricci
2025	J	`jnl`	Predicting therapy dropout in chronic pain management: a machine learning approach to cannabis treatment. Frontiers Artif. Intell. Anna Visibelli, Rebecca Finetti, Bianca Roncaglia, Paolo Poli, Ottavia Spiga, Annalisa Santucci
2022	J	`jnl`	Bioinformatics Approaches to Predict Mutation Effects in the Binding Site of the Proangiogenic Molecule CD93. Frontiers Bioinform. Vittoria Cicaloni, Malancha Karmakar, Luisa Frusciante, Francesco Pettini, Anna Visibelli, Maurizio Orlandini, Federico Galvagni, Maurizio Mongiat, Michael Silk, Federica Nardi, David B. Ascher, Annalisa Santucci, Ottavia Spiga
2022	J	`jnl`	Structural Bioinformatic Survey of Protein-Small Molecule Interfaces Delineates the Role of Glycine in Surface Pocket Formation. IEEE ACM Trans. Comput. Biol. Bioinform. Pietro Bongini, Neri Niccolai, Alfonso Trezza, Guido Mangiavacchi, Annalisa Santucci, Ottavia Spiga, Monica Bianchini, Simone Gardini
2021	J	`jnl`	Machine learning application for patient stratification and phenotype/genotype investigation in a rare disease. Briefings Bioinform. Ottavia Spiga, Vittoria Cicaloni, Giovanna Maria Dimitri, Francesco Pettini, Daniela Braconi, Andrea Bernini, Annalisa Santucci
2021	J	`jnl`	Structural bioinformatics survey on disease-inducing missense mutations. J. Bioinform. Comput. Biol. Pietro Bongini, Simone Gardini, Monica Bianchini, Ottavia Spiga, Neri Niccolai
2020	J	`jnl`	AKUImg: A database of cartilage images of Alkaptonuria patients. Comput. Biol. Medicine Alberto Rossi, Giorgia Giacomini, Vittoria Cicaloni, Silvia Galderisi, Maria Serena Milella, Andrea Bernini, Lia Millucci, Ottavia Spiga, Monica Bianchini, Annalisa Santucci
2020	J	`jnl`	Transient pockets as mediators of gas molecules routes inside proteins: The case study of dioxygen pathway in homogentisate 1, 2-dioxygenase and its implication in Alkaptonuria development. Comput. Biol. Chem. Andrea Bernini, Silvia Galderisi, Ottavia Spiga, Chukwudi Onyekachi Amarabom, Annalisa Santucci
2018	J	`jnl`	A new integrated and interactive tool applicable to inborn errors of metabolism: Application to alkaptonuria. Comput. Biol. Medicine Ottavia Spiga, Vittoria Cicaloni, Andrea Zatkova, Lia Millucci, Giulia Bernardini, Andrea Bernini, Barbara Marzocchi, Monica Bianchini, Andrea Zugarini, Alberto Rossi, Matteo Zazzeri, Alfonso Trezza, Bruno Frediani, Lakshminarayan Ranganath, Daniela Braconi, Annalisa Santucci
2017	J	`jnl`	ApreciseKUre: an approach of Precision Medicine in a Rare Disease. BMC Medical Informatics Decis. Mak. Ottavia Spiga, Vittoria Cicaloni, Andrea Bernini, Andrea Zatkova, Annalisa Santucci
2017	J	`jnl`	Toward a generalized computational workflow for exploiting transient pockets as new targets for small molecule stabilizers: Application to the homogentisate 1, 2-dioxygenase mutants at the base of rare disease Alkaptonuria. Comput. Biol. Chem. Andrea Bernini, Silvia Galderisi, Ottavia Spiga, Giulia Bernardini, Neri Niccolai, Fabrizio Manetti, Annalisa Santucci
2013	J	`jnl`	ProCoCoA: A quantitative approach for analyzing protein core composition. Comput. Biol. Chem. Silvia Bottini, Andrea Bernini, Matteo De Chiara, Diego Garlaschelli, Ottavia Spiga, Marco Dioguardi, Elisa Vannuccini, Anna Tramontano, Neri Niccolai
2005	J	`jnl`	Three-dimensional computation of atom depth in complex molecular structures. Bioinform. Daniele Varrazzo, Andrea Bernini, Ottavia Spiga, Arianna Ciutti, Stefano Chiellini, Vincenzo Venditti, Luisa Bracci, Neri Niccolai