Osamu Hirose

21 papers Journal 16Unranked 5
YearRankTypeTitle / Venue / Authors
2026 J jnl
Domain Elastic Transform: Bayesian Function Registration for High-Dimensional Scientific Data.
CoRR
Osamu Hirose, Emanuele Rodolà
2023 J jnl
Geodesic-Based Bayesian Coherent Point Drift.
IEEE Trans. Pattern Anal. Mach. Intell.
Osamu Hirose
2021 J jnl
A Bayesian Formulation of Coherent Point Drift.
IEEE Trans. Pattern Anal. Mach. Intell.
Osamu Hirose
2021 J jnl
Acceleration of Non-Rigid Point Set Registration With Downsampling and Gaussian Process Regression.
IEEE Trans. Pattern Anal. Mach. Intell.
Osamu Hirose
2021 J jnl
Erratum to "A Bayesian Formulation of Coherent Point Drift".
IEEE Trans. Pattern Anal. Mach. Intell.
Osamu Hirose
2018 J jnl
SPF-CellTracker: Tracking Multiple Cells with Strongly-Correlated Moves Using a Spatial Particle Filter.
IEEE ACM Trans. Comput. Biol. Bioinform.
Osamu Hirose, Shotaro Kawaguchi, Terumasa Tokunaga, Yu Toyoshima, Takayuki Teramoto, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida
2017 J jnl
Dependent landmark drift: robust point set registration based on the Gaussian mixture model with a statistical shape model.
CoRR
Osamu Hirose
2016 J jnl
Accurate Automatic Detection of Densely Distributed Cell Nuclei in 3D Space.
PLoS Comput. Biol.
Yu Toyoshima, Terumasa Tokunaga, Osamu Hirose, Manami Kanamori, Takayuki Teramoto, Moon Sun Jang, Sayuri Kuge, Takeshi Ishihara, Ryo Yoshida, Yuichi Iino
2015 J jnl
SPF-CellTracker: Tracking multiple cells with strongly-correlated moves using a spatial particle filter.
CoRR
Osamu Hirose, Shotaro Kawaguchi, Terumasa Tokunaga, Yu Toyoshima, Takayuki Teramoto, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida
2015 — conf
SPY: A Novel Resampling Method for Improving Classification Performance in Imbalanced Data.
KSE
Xuan Tho Dang, Dang Hung Tran, Osamu Hirose, Kenji Satou
2014 J jnl
Automated detection and tracking of many cells by using 4D live-cell imaging data.
Bioinform.
Terumasa Tokunaga, Osamu Hirose, Shotaro Kawaguchi, Yu Toyoshima, Takayuki Teramoto, Hisaki Ikebata, Sayuri Kuge, Takeshi Ishihara, Yuichi Iino, Ryo Yoshida
2014 J jnl
Inference of domain-domain interactions by matrix factorisation and domain-level features.
Int. J. Funct. Informatics Pers. Medicine
Thi Tu Kien Le, Osamu Hirose, Thi Lan Anh Nguyen, Thammakorn Saethang, Vu Anh Tran, Xuan Tho Dang, Duc Luu Ngo, Mamoru Kubo, Yoichi Yamada, Kenji Satou
2013 J jnl
TIGAR: transcript isoform abundance estimation method with gapped alignment of RNA-Seq data by variational Bayesian inference.
Bioinform.
Naoki Nariai, Osamu Hirose, Kaname Kojima, Masao Nagasaki
2012 J jnl
EpicCapo: epitope prediction using combined information of amino acid pairwise contact potentials and HLA-peptide contact site information.
BMC Bioinform.
Thammakorn Saethang, Osamu Hirose, Ingorn Kimkong, Vu Anh Tran, Xuan Tho Dang, Thi Lan Anh Nguyen, Thi Tu Kien Le, Mamoru Kubo, Yoichi Yamada, Kenji Satou
2011 J jnl
SiGN-SSM: open source parallel software for estimating gene networks with state space models.
Bioinform.
Yoshinori Tamada, Rui Yamaguchi, Seiya Imoto, Osamu Hirose, Ryo Yoshida, Masao Nagasaki, Satoru Miyano
2010 — conf
A Self-organizing State Space Approach to Inferring Time-Varying Causalities between Regulatory Proteins.
ITBAM
Osamu Hirose, Kentaro Shimizu
2010 J jnl
Prediction of Carbohydrate-Binding Proteins from Sequences Using Support Vector Machines.
Adv. Bioinformatics
Seizi Someya, Masanori Kakuta, Mizuki Morita, Kazuya Sumikoshi, Cao Wei, Ge Zhenyi, Osamu Hirose, Shugo Nakamura, Tohru Terada, Kentaro Shimizu
2008 — conf
Analyzing Time Course Gene Expression Data with Biological and Technical Replicates to Estimate Gene Networks by State Space Models.
Asia International Conference on Modelling and Simulation
Osamu Hirose, Ryo Yoshida, Rui Yamaguchi, Seiya Imoto, Tomoyuki Higuchi, Satoru Miyano
2008 J jnl
Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models.
Bioinform.
Osamu Hirose, Ryo Yoshida, Seiya Imoto, Rui Yamaguchi, Tomoyuki Higuchi, Stephen D. Charnock-Jones, Cristin G. Print, Satoru Miyano
2007 — conf
Anisotropic Potential Field Maximization Model for Subjective Contour from Line Figure.
ISVC (1)
Osamu Hirose, Tomoharu Nagao
2005 — conf
Estimating Gene Networks from Expression Data and Binding Location Data via Boolean Networks.
ICCSA (3)
Osamu Hirose, Naoki Nariai, Yoshinori Tamada, Hideo Bannai, Seiya Imoto, Satoru Miyano