Ora Schueler-Furman

14 papers B 1Journal 12Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
Induction Meets Biology: Mechanisms of Repeat Detection in Protein Language Models.
CoRR
Gal Kesten-Pomeranz, Yaniv Nikankin, Anja Reusch, Tomer Tsaban, Ora Schueler-Furman, Yonatan Belinkov
2025 J jnl
actifpTM: a refined confidence metric of AlphaFold2 predictions involving flexible regions.
Bioinform.
Julia K. Varga, Sergey Ovchinnikov, Ora Schueler-Furman
2023 J jnl
Protein language models can capture protein quaternary state.
BMC Bioinform.
Orly Avraham, Tomer Tsaban, Ziv Ben-Aharon, Linoy Tsaban, Ora Schueler-Furman
2020 J jnl
Better together: Elements of successful scientific software development in a distributed collaborative community.
PLoS Comput. Biol.
Julia Koehler Leman, Brian D. Weitzner, P. Douglas Renfrew, Steven M. Lewis, Rocco Moretti, Andrew M. Watkins, Vikram Khipple Mulligan, Sergey Lyskov, Jared Adolf-Bryfogle, Jason W. Labonte, Justyna Krys, RosettaCommons Consortium, Christopher Bystroff, William R. Schief, Dominik Gront, Ora Schueler-Furman, David Baker, Philip Bradley, Roland L. Dunbrack Jr., Tanja Kortemme, Andrew Leaver-Fay, Charlie E. M. Strauss, Jens Meiler, Brian Kuhlman, Jeffrey J. Gray, Richard Bonneau
2017 J jnl
ClusPro PeptiDock: efficient global docking of peptide recognition motifs using FFT.
Bioinform.
Kathryn A. Porter, Bing Xia, Dmitri Beglov, Tanggis Bohnuud, Nawsad Alam, Ora Schueler-Furman, Dima Kozakov
2017 J jnl
High-resolution global peptide-protein docking using fragments-based PIPER-FlexPepDock.
PLoS Comput. Biol.
Nawsad Alam, Oriel Goldstein, Bing Xia, Kathryn A. Porter, Dima Kozakov, Ora Schueler-Furman
2016 J jnl
Peptiderive server: derive peptide inhibitors from protein-protein interactions.
Nucleic Acids Res.
Yuval Sedan, Orly Marcu, Sergey Lyskov, Ora Schueler-Furman
2012 J jnl
Application of asymmetric statistical potentials to antibody-protein docking.
Bioinform.
Ryan Brenke, David R. Hall, Gwo-Yu Chuang, Stephen R. Comeau, Tanggis Bohnuud, Dmitri Beglov, Ora Schueler-Furman, Sandor Vajda, Dima Kozakov
2011 J jnl
Identification of a Novel Class of Farnesylation Targets by Structure-Based Modeling of Binding Specificity.
PLoS Comput. Biol.
Nir London, Corissa L. Lamphear, James L. Hougland, Carol A. Fierke, Ora Schueler-Furman
2011 J jnl
Rosetta FlexPepDock web server - high resolution modeling of peptide-protein interactions.
Nucleic Acids Res.
Nir London, Barak Raveh, Eyal Cohen, Guy Fathi, Ora Schueler-Furman
2009 J jnl
Rapid Sampling of Molecular Motions with Prior Information Constraints.
PLoS Comput. Biol.
Barak Raveh, Angela Enosh, Ora Schueler-Furman, Dan Halperin
2008 J jnl
Minimizing and Learning Energy Functions for Side-Chain Prediction.
J. Comput. Biol.
Chen Yanover, Ora Schueler-Furman, Yair Weiss
2007 B conf
Minimizing and Learning Energy Functions for Side-Chain Prediction.
RECOMB
Chen Yanover, Ora Schueler-Furman, Yair Weiss
2006 — conf
Learning MHC I - peptide binding.
ISMB (Supplement of Bioinformatics)
Nebojsa Jojic, Manuel Reyes-Gomez, David Heckerman, Carl Myers Kadie, Ora Schueler-Furman