Onkar Singh

22 papers Misc 1Journal 16Unranked 4
YearRankTypeTitle / Venue / Authors
2025 J jnl
SN Comput. Sci.
Onkar Singh
2025 J jnl
Expert Syst. J. Knowl. Eng.
Onkar Singh, Ajay Jaiswal, Nitin Kumar, Naveen Kumar
2025 J jnl
Appl. Intell.
Onkar Singh, Ajay Jaiswal, Naveen Kumar
2025 J jnl
IEEE Access
Stuti Pandey, Onkar Singh, Ashish Pandey, Chandrasen Pandey
2024 conf
IST
Abhinandan Jha, Onkar Singh, Koushlendra Kumar Singh, Akbar Sheikh Akbari, Masahiro Takei
2024 J jnl
SN Comput. Sci.
Onkar Singh, Koushlendra Kumar Singh
2024 J jnl
SN Comput. Sci.
Onkar Singh, Kanchan Lata Kashyap, Koushlendra Kumar Singh
2023 conf
IST
Onkar Singh, Koushlendra Kumar Singh, Saikat Das, Akbar Sheikh Akbari, Nurulfajar Abd Manap
2023 J jnl
Biomed. Signal Process. Control.
Onkar Singh, Kanchan Lata Kashyap, Koushlendra Kumar Singh
2021 J jnl
BMC Bioinform.
Onkar Singh, Wen-Lian Hsu, Emily Chia-Yu Su
2019 Misc conf
AMIA
Grace Gao, Madeleine J. Kerr, Sarah Beman, Candice Bruhjell, Joyce Rudenick, Onkar Singh, Mehrdad Rafiei, Karen A. Monsen
2019 ch.
Encyclopedia of Bioinformatics and Computational Biology (2)
Onkar Singh, Nai-Wen Chang, Hong-Jie Dai, Jitendra Jonnagaddala
2018 J jnl
Database J. Biol. Databases Curation
Hong-Jie Dai, Onkar Singh
2017 conf
DDDSM@IJCNLP
Chen-Kai Wang, Onkar Singh, Zhao-Li Tang, Hong-Jie Dai
2016 J jnl
Database J. Biol. Databases Curation
Sun Kim, Rezarta Islamaj Dogan, Andrew Chatr-aryamontri, Christie S. Chang, Rose Oughtred, Jennifer M. Rust, Riza Batista-Navarro, Jacob Carter, Sophia Ananiadou, Sérgio Matos, André Santos, David Campos, José Luís Oliveira, Onkar Singh, Jitendra Jonnagaddala, Hong-Jie Dai, Emily Chia-Yu Su, Yung-Chun Chang, Yu-Chen Su, Chun-Han Chu, Chien Chin Chen, Wen-Lian Hsu, Yifan Peng, Cecilia N. Arighi, Cathy H. Wu, K. Vijay-Shanker, Ferhat Aydin, Zehra Melce Hüsünbeyi, Arzucan Özgür, Soo-Yong Shin, Dongseop Kwon, Kara Dolinski, Mike Tyers, W. John Wilbur, Donald C. Comeau
2016 conf
EMBC
Suleman Atique, Mowafa S. Househ, Luis Fernández-Luque, Elia Gabarron, Marian Wan, Onkar Singh, Vicente Traver Salcedo, Yu-Chuan (Jack) Li, Syed Abdul Shabbir
2016 J jnl
Database J. Biol. Databases Curation
Hong-Jie Dai, Chu-Hsien Su, Po-Ting Lai, Ming-Siang Huang, Jitendra Jonnagaddala, Toni Rose Jue, Shruti Rao, Hui-Jou Chou, Marija Milacic, Onkar Singh, Syed Abdul Shabbir, Wen-Lian Hsu
2016 J jnl
Database J. Biol. Databases Curation
Hong-Jie Dai, Onkar Singh, Jitendra Jonnagaddala, Emily Chia-Yu Su
2016 J jnl
Database J. Biol. Databases Curation
Qinghua Wang, Shabbir Syed-Abdul, Lara Almeida, Sophia Ananiadou, Yalbi I. Balderas-Martínez, Riza Batista-Navarro, David Campos, Lucy Chilton, Hui-Jou Chou, Gabriela Contreras, Laurel Cooper, Hong-Jie Dai, Barbra Ferrell, Juliane Fluck, Socorro Gama-Castro, Nancy George, Georgios V. Gkoutos, Afroza Khanam Irin, Lars Juhl Jensen, Silvia Jimenez, Toni Rose Jue, Ingrid M. Keseler, Sumit Madan, Sérgio Matos, Peter McQuilton, Marija Milacic, Matthew E. Mort, Jeyakumar Natarajan, Evangelos Pafilis, Emiliano Pereira, Shruti Rao, Fabio Rinaldi, Karen Rothfels, David Salgado, Raquel M. Silva, Onkar Singh, Raymund Stefancsik, Chu-Hsien Su, Suresh Subramani, Hamsa D. Tadepally, Loukia Tsaprouni, Nicole A. Vasilevsky, Xiaodong Wang, Andrew Chatr-aryamontri, Stanley J. F. Laulederkind, Sherri Matis-Mitchell, Johanna R. McEntyre, Sandra E. Orchard, Sangya Pundir, Raul Rodriguez-Esteban, Kimberly Van Auken, Zhiyong Lu, Mary L. Schaeffer, Cathy H. Wu, Lynette Hirschman, Cecilia N. Arighi
2016 J jnl
BMC Bioinform.
Onkar Singh, Emily Chia-Yu Su
2015 J jnl
J. Syst. Control. Eng.
Mohan K. Misra, Bishakh Bhattacharya, Onkar Singh, Arya Chatterjee
2009 J jnl
J. Comput. Chem.
Jagdish Chandra Patra, Onkar Singh
tests/unit/test_smali_normalization.py
← Index tests/unit/test_smali_normalization.py python
"""Unit tests for smali semantic normalization.

Tests the three normalization levels (category, opcode, opcode_api),
opcode categorization, ACFG feature index mapping, and integration
with MinHash computation.
"""
import pytest

pytestmark = [pytest.mark.unit, pytest.mark.apk, pytest.mark.decompile]


class TestCategorizeOpcode:
    """Tests for opcode -> semantic category mapping."""

    def test_arithmetic(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("add-int") == "ALU"
        assert categorize_opcode("mul-long/2addr") == "ALU"
        assert categorize_opcode("neg-int") == "ALU"

    def test_data_movement(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("move-result") == "MOV"
        assert categorize_opcode("const/4") == "CONST"
        assert categorize_opcode("const-string") == "CONST"

    def test_memory_access(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("iget-object") == "LOAD"
        assert categorize_opcode("sput-wide") == "STORE"
        assert categorize_opcode("aget-byte") == "LOAD"

    def test_invocation(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("invoke-virtual") == "CALL"
        assert categorize_opcode("invoke-static") == "CALL"
        assert categorize_opcode("invoke-direct") == "CALL"

    def test_control_flow(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("if-eqz") == "BRANCH"
        assert categorize_opcode("goto") == "JMP"
        assert categorize_opcode("goto/16") == "JMP"
        assert categorize_opcode("return-void") == "RET"

    def test_comparison(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("cmp-long") == "CMP"
        assert categorize_opcode("cmpl-float") == "CMP"
        assert categorize_opcode("cmpg-double") == "CMP"

    def test_conversion(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("int-to-long") == "CONV"
        assert categorize_opcode("float-to-int") == "CONV"

    def test_object_type(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("new-instance") == "ALLOC"
        assert categorize_opcode("check-cast") == "TYPE"
        assert categorize_opcode("instance-of") == "TYPE"

    def test_exception_sync(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("throw") == "EXC"
        assert categorize_opcode("monitor-enter") == "SYNC"

    def test_unknown(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("nop") == "OTHER"


class TestNormalizeInstruction:
    """Tests for single instruction normalization at various levels."""

    def test_category_level(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        assert normalize_instruction("add-int v0, v1, v2", "category") == "ALU"
        assert normalize_instruction("invoke-virtual {p0}, Lcom/Foo;->bar()V", "category") == "CALL"
        assert normalize_instruction("return-void", "category") == "RET"

    def test_opcode_level_strips_width(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        # Width variants collapse to same base
        assert normalize_instruction("add-int v0, v1, v2", "opcode") == "add"
        assert normalize_instruction("add-long v0, v2, v4", "opcode") == "add"
        assert normalize_instruction("add-float v0, v1, v2", "opcode") == "add"
        # Addressing modes collapse too
        assert normalize_instruction("add-int/2addr v0, v1", "opcode") == "add"

    def test_opcode_api_invoke(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            "invoke-virtual {p0, v0}, Lcom/example/Foo;->bar(I)V"
        )
        assert result == "CALL Lcom/example/Foo;->bar(I)V"

    def test_opcode_api_invoke_no_ref(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        # If somehow no method ref is found, fallback to CALL
        assert normalize_instruction("invoke-virtual {v0}") == "CALL"

    def test_opcode_api_field_load(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            "iget-object v0, p0, Lcom/Foo;->mField:Ljava/lang/String;"
        )
        assert result == "LOAD Lcom/Foo;->mField:Ljava/lang/String;"

    def test_opcode_api_field_store(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            "iput-object v0, p0, Lcom/Foo;->mField:Ljava/lang/String;"
        )
        assert result == "STORE Lcom/Foo;->mField:Ljava/lang/String;"

    def test_opcode_api_androguard_field_format(self):
        """androguard uses space instead of colon in field references."""
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            "iget-object v0, p0, Lcom/Foo;->mField Ljava/lang/String;"
        )
        assert result.startswith("LOAD")
        assert "Lcom/Foo;->mField" in result

    def test_opcode_api_new_instance(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            "new-instance v0, Lcom/example/MyClass;"
        )
        assert result == "ALLOC Lcom/example/MyClass;"

    def test_opcode_api_const_string(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            'const-string v0, "hello world"'
        )
        assert result == 'CONST_STR "hello world"'

    def test_opcode_api_const_string_jumbo(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            'const-string/jumbo v0, "large string"'
        )
        assert result == 'CONST_STR "large string"'

    def test_opcode_api_fallback_to_category(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        # Non-special instructions fall back to category
        assert normalize_instruction("add-int v0, v1, v2") == "ALU"
        assert normalize_instruction("return-void") == "RET"
        assert normalize_instruction("nop") == "OTHER"

    def test_empty_input(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        assert normalize_instruction("") == ""
        assert normalize_instruction("   ") == ""


class TestNormalizeMethodBody:
    """Tests for full method body normalization."""

    def test_filters_directives_labels_comments(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_method_body
        body = """\
.locals 2
# comment
:label_0
add-int v0, v1, v2
.line 42
invoke-virtual {p0}, Lcom/Foo;->bar()V
return-void
"""
        result = normalize_method_body(body, "category")
        assert result == ["ALU", "CALL", "RET"]

    def test_opcode_api_preserves_api_refs(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_method_body
        body = """\
const/4 v0, 0x0
invoke-virtual {p0, v0}, Lcom/Foo;->setX(I)V
iget-object v1, p0, Lcom/Foo;->name:Ljava/lang/String;
return-void
"""
        result = normalize_method_body(body, "opcode_api")
        assert result[0] == "CONST"
        assert result[1] == "CALL Lcom/Foo;->setX(I)V"
        assert result[2] == "LOAD Lcom/Foo;->name:Ljava/lang/String;"
        assert result[3] == "RET"

    def test_empty_body(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_method_body
        assert normalize_method_body("") == []
        assert normalize_method_body("\n\n") == []


class TestNormalizationWithMinHash:
    """Integration tests: normalization + MinHash computation."""

    def test_minhash_returns_signature(self):
        from redb.extractors.decompiler.apk.method_extractor import compute_minhash
        body = """\
const/4 v0, 0x0
invoke-virtual {p0, v0}, Lcom/Foo;->bar(I)V
iget-object v1, p0, Lcom/Foo;->name:Ljava/lang/String;
add-int v2, v0, v1
return-void
"""
        sig = compute_minhash(body)
        assert sig is not None
        assert len(sig) == 64
        assert all(0 <= v < 256 for v in sig)

    def test_minhash_register_invariance(self):
        """Same operations with different registers should produce identical signatures."""
        from redb.extractors.decompiler.apk.method_extractor import compute_minhash
        body_a = """\
const/4 v0, 0x0
invoke-virtual {p0, v0}, Lcom/Foo;->bar(I)V
iget-object v1, p0, Lcom/Foo;->name:Ljava/lang/String;
add-int v2, v0, v1
return-void
"""
        body_b = """\
const/4 v3, 0x0
invoke-virtual {p1, v3}, Lcom/Foo;->bar(I)V
iget-object v4, p1, Lcom/Foo;->name:Ljava/lang/String;
add-int v5, v3, v4
return-void
"""
        sig_a = compute_minhash(body_a)
        sig_b = compute_minhash(body_b)
        assert sig_a == sig_b

    def test_minhash_width_invariance(self):
        """Width variants of same operations should produce identical signatures."""
        from redb.extractors.decompiler.apk.method_extractor import compute_minhash
        body_int = """\
add-int v0, v1, v2
sub-int v3, v0, v1
mul-int v4, v0, v3
return v4
"""
        body_long = """\
add-long v0, v2, v4
sub-long v6, v0, v2
mul-long v8, v0, v6
return-wide v8
"""
        sig_int = compute_minhash(body_int)
        sig_long = compute_minhash(body_long)
        # Both normalize to ALU, ALU, ALU, RET -> identical
        assert sig_int == sig_long

    def test_minhash_different_apis_differ(self):
        """Methods calling different APIs should produce different signatures."""
        from redb.extractors.decompiler.apk.method_extractor import compute_minhash
        body_a = """\
const/4 v0, 0x0
invoke-virtual {p0, v0}, Lcom/crypto/AES;->encrypt([B)[B
invoke-virtual {v0}, Ljava/io/OutputStream;->write([B)V
return-void
"""
        body_b = """\
const/4 v0, 0x0
invoke-virtual {p0, v0}, Ljava/lang/String;->length()I
invoke-virtual {v0}, Ljava/io/PrintStream;->println(I)V
return-void
"""
        sig_a = compute_minhash(body_a)
        sig_b = compute_minhash(body_b)
        assert sig_a != sig_b

    def test_minhash_too_few_instructions(self):
        from redb.extractors.decompiler.apk.method_extractor import compute_minhash
        assert compute_minhash("return-void\nnop") is None


class TestACFGBlockFeatures:
    """Tests for per-block ACFG feature extraction via smali_cfg."""

    def test_simple_linear_method(self):
        from redb.extractors.decompiler.apk.smali_cfg import compute_cfg_metrics
        body = """\
add-int v0, v1, v2
invoke-virtual {p0}, Lcom/Foo;->bar()V
return-void
"""
        metrics = compute_cfg_metrics(body)
        assert metrics.block_count >= 1
        assert len(metrics.block_features) == metrics.block_count
        # Each feature vector has 8 elements
        for feat in metrics.block_features:
            assert len(feat) == 8

    def test_branching_method_has_multiple_blocks(self):
        from redb.extractors.decompiler.apk.smali_cfg import compute_cfg_metrics
        body = """\
const/4 v0, 0x0
if-eqz v0, :cond_0
invoke-virtual {p0}, Lcom/Foo;->a()V
goto :goto_0
:cond_0
invoke-virtual {p0}, Lcom/Foo;->b()V
:goto_0
return-void
"""
        metrics = compute_cfg_metrics(body)
        assert metrics.block_count >= 3
        assert len(metrics.block_features) == metrics.block_count

    def test_feature_vector_arithmetic_count(self):
        from redb.extractors.decompiler.apk.smali_cfg import compute_cfg_metrics
        body = """\
add-int v0, v1, v2
sub-int v3, v0, v1
mul-int v4, v0, v3
return v4
"""
        metrics = compute_cfg_metrics(body)
        assert len(metrics.block_features) == 1
        feat = metrics.block_features[0]
        # feat[0] = instr_count (4), feat[1] = arithmetic (3)
        assert feat[0] == 4
        assert feat[1] >= 3  # 3 ALU ops

    def test_feature_vector_call_count(self):
        from redb.extractors.decompiler.apk.smali_cfg import compute_cfg_metrics
        body = """\
invoke-virtual {p0}, Lcom/A;->a()V
invoke-static {v0}, Lcom/B;->b()V
return-void
"""
        metrics = compute_cfg_metrics(body)
        feat = metrics.block_features[0]
        # feat[4] = call count
        assert feat[4] == 2