Omar Awile

15 papers B 1C 2Journal 9Unranked 2
YearRankTypeTitle / Venue / Authors
2023 J jnl
Editorial: Neuroscience, computing, performance, and benchmarks: Why it matters to neuroscience how fast we can compute.
Frontiers Neuroinformatics
James B. Aimone, Omar Awile, Markus Diesmann, James C. Knight, Thomas Nowotny, Felix Schürmann
2023 B conf
MOD2IR: High-Performance Code Generation for a Biophysically Detailed Neuronal Simulation DSL.
CC
George Mitenkov, Ioannis Magkanaris, Omar Awile, Pramod S. Kumbhar, Felix Schürmann, Alastair F. Donaldson
2022 J jnl
Modernizing the NEURON Simulator for Sustainability, Portability, and Performance.
Frontiers Neuroinformatics
Omar Awile, Pramod S. Kumbhar, Nicolas Cornu, Salvador Dura-Bernal, James Gonzalo King, Olli Lupton, Ioannis Magkanaris, Robert A. McDougal, Adam J. H. Newton, Fernando Pereira, Alexandru Savulescu, Nicholas T. Carnevale, William W. Lytton, Michael L. Hines, Felix Schürmann
2022 J jnl
STEPS 4.0: Fast and memory-efficient molecular simulations of neurons at the nanoscale.
Frontiers Neuroinformatics
Weiliang Chen, Tristan Carel, Omar Awile, Nicola Cantarutti, Giacomo Castiglioni, Alessandro Cattabiani, Baudouin Del Marmol, Iain Hepburn, James G. King, Christos Kotsalos, Pramod S. Kumbhar, Jules Lallouette, Samuel Melchior, Felix Schürmann, Erik De Schutter
2020 — conf
An Optimizing Multi-platform Source-to-source Compiler Framework for the NEURON MODeling Language.
ICCS (1)
Pramod S. Kumbhar, Omar Awile, Liam Keegan, Jorge Blanco Alonso, James Gonzalo King, Michael L. Hines, Felix Schürmann
2020 C conf
CoreNEURON: Performance and Energy Efficiency Evaluation on Intel and Arm CPUs.
CLUSTER
Joel Criado, Marta Garcia-Gasulla, Pramod S. Kumbhar, Omar Awile, Ioannis Magkanaris, Filippo Mantovani
2019 J jnl
An optimizing multi-platform source-to-source compiler framework for the NEURON MODeling Language.
CoRR
Pramod S. Kumbhar, Omar Awile, Liam Keegan, Jorge Blanco Alonso, James Gonzalo King, Michael L. Hines, Felix Schürmann
2018 J jnl
An efficient low-rank Kalman filter for modern SIMD architectures.
Concurr. Comput. Pract. Exp.
Daniel Hugo Cámpora Pérez, Omar Awile
2018 C conf
Parallelizing and Optimizing LHCb-Kalman for Intel Xeon Phi KNL Processors.
PDP
Placido Fernández, David del Rio Astorga, Manuel F. Dolz, Javier Fernández, Omar Awile, José Daniel García
2017 — conf
A High-Throughput Kalman Filter for Modern SIMD Architectures.
Euro-Par Workshops
Daniel Hugo Cámpora Pérez, Omar Awile, Cédric Potterat
2014 J jnl
A Pthreads Wrapper for Fortran 2003.
ACM Trans. Math. Softw.
Omar Awile, Ivo F. Sbalzarini
2013 — —
A domain-specific language and scalable middleware for particle-mesh simulations on heterogeneous parallel computers.
Omar Awile
2013 J jnl
A portable OpenCL implementation of generic particle-mesh and mesh-particle interpolation in 2D and 3D.
Parallel Comput.
Ferit Büyükkeçeci, Omar Awile, Ivo F. Sbalzarini
2012 J jnl
Fast neighbor lists for adaptive-resolution particle simulations.
Comput. Phys. Commun.
Omar Awile, Ferit Büyükkeçeci, Sylvain Reboux, Ivo F. Sbalzarini
2010 J jnl
Intrinsically Disordered Regions May Lower the Hydration Free Energy in Proteins: A Case Study of Nudix Hydrolase in the Bacterium
PLoS Comput. Biol.
Omar Awile, Anita Krisko, Ivo F. Sbalzarini, Bojan Zagrovic