Oluwatosin Oluwadare

12 papers C 1Journal 11
YearRankTypeTitle / Venue / Authors
2025 J jnl
DiCARN-DNase: enhancing cell-to-cell Hi-C resolution using dilated cascading ResNet with self-attention and DNase-seq chromatin accessibility data.
Bioinform.
Samuel Olowofila, Oluwatosin Oluwadare
2025 J jnl
HiCForecast: dynamic network optical flow estimation algorithm for spatiotemporal Hi-C data forecasting.
Bioinform.
Dmitry Pinchuk, H. M. A. Mohit Chowdhury, Abhishek Pandeya, Oluwatosin Oluwadare
2025 J jnl
Unicorn: enhancing single-cell Hi-C data with blind super-resolution for 3D genome structure reconstruction.
Bioinform.
Mohan Kumar B. Chandrashekar, Rohit Menon, Samuel Olowofila, Oluwatosin Oluwadare
2024 J jnl
Comparative study on chromatin loop callers using Hi-C data reveals their effectiveness.
BMC Bioinform.
H. M. A. Mohit Chowdhury, Terrance E. Boult, Oluwatosin Oluwadare
2022 J jnl
EnsembleSplice: ensemble deep learning model for splice site prediction.
BMC Bioinform.
Victor Akpokiro, Trevor Martin, Oluwatosin Oluwadare
2022 J jnl
HiCARN: resolution enhancement of Hi-C data using cascading residual networks.
Bioinform.
Parker Hicks, Oluwatosin Oluwadare
2022 J jnl
ParticleChromo3D: a Particle Swarm Optimization algorithm for chromosome 3D structure prediction from Hi-C data.
BioData Min.
David Vadnais, Michael Middleton, Oluwatosin Oluwadare
2022 J jnl
TADMaster: a comprehensive web-based tool for the analysis of topologically associated domains.
BMC Bioinform.
Sean Higgins, Victor Akpokiro, Allen Westcott, Oluwatosin Oluwadare
2021 C conf
DeepSplicer: An Improved Method of Splice Sites Prediction using Deep Learning.
ICMLA
Victor Akpokiro, Oluwatosin Oluwadare, Jugal Kalita
2019 J jnl
GenomeFlow: a comprehensive graphical tool for modeling and analyzing 3D genome structure.
Bioinform.
Tuan Trieu, Oluwatosin Oluwadare, Julia Wopata, Jianlin Cheng
2017 J jnl
ClusterTAD: an unsupervised machine learning approach to detecting topologically associated domains of chromosomes from Hi-C data.
BMC Bioinform.
Oluwatosin Oluwadare, Jianlin Cheng
2015 J jnl
Iterative reconstruction of three-dimensional models of human chromosomes from chromosomal contact data.
BMC Bioinform.
Jackson Nowotny, Sharif Ahmed, Lingfei Xu, Oluwatosin Oluwadare, Hannah Chen, Noelan Hensley, Tuan Trieu, Renzhi Cao, Jianlin Cheng
2025 Best paper conf
Assessing the Effectiveness of the Tigress Obfuscator Against MOPSA and BinaryNinja.
CheckMATE
Nicolò Altamura, Enrico Bragastini, Marco Campion, Mila Dalla Preda
2026 Best paper preprint
ASSEMBLAGE-DEEPHISTORY: A Cross-Build Binary Dataset with Temporal Coverage.
arXiv
Chang Liu, Noah Fleischmann, Nicolò Altamura, Edward Raff, James Holt, Kristopher Micinski