Olivier Elemento

27 papers A* 1A 1B 1C 1Journal 20Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
AI-Driven Acoustic Voice Biomarker-Based Hierarchical Classification of Benign Laryngeal Voice Disorders from Sustained Vowels.
CoRR
Mohsen Annabestani, Samira Aghadoost, Anaïs Rameau, Olivier Elemento, Gloria Chia-Yi Chiang
2025 J jnl
Predicting response to neoadjuvant chemotherapy in muscle-invasive bladder cancer via interpretable multimodal deep learning.
npj Digit. Medicine
Zilong Bai, Mohamed Osman, Matthew Brendel, Catherine M. Tangen, Thomas W. Flaig, Ian M. Thompson, Melissa Plets, M. Scott Lucia, Dan Theodorescu, Daniel Gustafson, Siamak Daneshmand, Joshua J. Meeks, Woonyoung Choi, Colin P. N. Dinney, Olivier Elemento, Seth P. Lerner, David J. McConkey, Bishoy M. Faltas, Fei Wang
2025 J jnl
The Bridge2AI-voice application: initial feasibility study of voice data acquisition through mobile health.
Frontiers Digit. Health
Elijah Moothedan, Micah Boyer, Stephanie Watts, Yassmeen Abdel-Aty, Satrajit Ghosh, Anaïs Rameau, Alexandros Sigaras, Olivier Elemento, Yael Bensoussan
2024 J jnl
Benchmarking multi-ancestry prostate cancer polygenic risk scores in a real-world cohort.
PLoS Comput. Biol.
Yajas Shah, Scott Kulm, Jones T. Nauseef, Zhengming Chen, Olivier Elemento, Kevin H. Kensler, Ravi N. Sharaf
2024 A conf
Developing Multi-Disorder Voice Protocols: A team science approach involving clinical expertise, bioethics, standards, and DEI.
INTERSPEECH
Anaïs Rameau, Satrajit Ghosh, Alexandros Sigaras, Olivier Elemento, Jean-Christophe Bélisle-Pipon, Vardit Ravitsky, Maria Powell, Alistair Johnson, David A. Dorr, Philip R. O. Payne, Micah Boyer, Stephanie Watts, Ruth Bahr, Frank Rudzicz, Jordan Lerner-Ellis, Shaheen Awan, Don Bolser, Yael Bensoussan
2022 J jnl
Application of Deep Learning on Single-Cell RNA-sequencing Data Analysis: A Review.
CoRR
Matthew Brendel, Chang Su, Zilong Bai, Hao Zhang, Olivier Elemento, Fei Wang
2022 J jnl
Application of Deep Learning on Single-cell RNA Sequencing Data Analysis: A Review.
Genom. Proteom. Bioinform.
Matthew Brendel, Chang Su, Zilong Bai, Hao Zhang, Olivier Elemento, Fei Wang
2020 J jnl
A machine learning and network framework to discover new indications for small molecules.
PLoS Comput. Biol.
Coryandar Gilvary, Jamal Elkhader, Neel Madhukar, Claire Henchcliffe, Marcus D. Goncalves, Olivier Elemento
2020 J jnl
ABEMUS: platform-specific and data-informed detection of somatic SNVs in cfDNA.
Bioinform.
Nicola Casiraghi, Francesco Orlando, Yari Ciani, Jenny Xiang, Andrea Sboner, Olivier Elemento, Gerhardt Attard, Himisha Beltran, Francesca Demichelis, Alessandro Romanel
2020 J jnl
Graph convolutional networks for computational drug development and discovery.
Briefings Bioinform.
Mengying Sun, Sendong Zhao, Coryandar Gilvary, Olivier Elemento, Jiayu Zhou, Fei Wang
2020 A* conf
Structure-Based Drug-Drug Interaction Detection via Expressive Graph Convolutional Networks and Deep Sets (Student Abstract).
AAAI
Mengying Sun, Fei Wang, Olivier Elemento, Jiayu Zhou
2019 J jnl
Deep learning enables robust assessment and selection of human blastocysts after in vitro fertilization.
npj Digit. Medicine
Pegah Khosravi, Ehsan Kazemi, Qiansheng Zhan, Jonas Malmsten, Marco Toschi, Pantelis Zisimopoulos, Alexandros Sigaras, Stuart Lavery, Lee A. D. Cooper, Cristina Hickman, Marcos Meseguer, Zev Rosenwaks, Olivier Elemento, Nikica Zaninovic, Iman Hajirasouliha
2019 J jnl
Drug knowledge bases and their applications in biomedical informatics research.
Briefings Bioinform.
Yongjun Zhu, Olivier Elemento, Jyotishman Pathak, Fei Wang
2019 J jnl
Predicting peptide presentation by major histocompatibility complex class I: an improved machine learning approach to the immunopeptidome.
BMC Bioinform.
Kevin Michael Boehm, Bhavneet Bhinder, Vijay Joseph Raja, Noah Dephoure, Olivier Elemento
2018 — conf
Breast Cancer Histopathological Image Classification: A Deep Learning Approach.
BIBM
Mahboubeh Jannesari, Mehdi Habibzadeh, HamidReza Aboulkheyr, Pegah Khosravi, Olivier Elemento, Mehdi Totonchi, Iman Hajirasouliha
2017 J jnl
A Computational Approach for Identifying Synergistic Drug Combinations.
PLoS Comput. Biol.
Kaitlyn M. Gayvert, Omar Aly, James Platt, Marcus W. Bosenberg, David F. Stern, Olivier Elemento
2017 J jnl
EthSEQ: ethnicity annotation from whole exome sequencing data.
Bioinform.
Alessandro Romanel, Tuo Zhang, Olivier Elemento, Francesca Demichelis
2017 J jnl
The cancer precision medicine knowledge base for structured clinical-grade mutations and interpretations.
J. Am. Medical Informatics Assoc.
Linda Huang, Helen Fernandes, Hamid Zia, Peyman Tavassoli, Hanna Rennert, David Pisapia, Marcin Imielinski, Andrea Sboner, Mark A. Rubin, Michael Kluk, Olivier Elemento
2016 J jnl
A primer on precision medicine informatics.
Briefings Bioinform.
Andrea Sboner, Olivier Elemento
2016 — ch.
Practical Analysis of Genome Contact Interaction Experiments.
Statistical Genomics
Mark A. Carty, Olivier Elemento
2011 J jnl
An integrated ChIP-seq analysis platform with customizable workflows.
BMC Bioinform.
Eugenia G. Giannopoulou, Olivier Elemento
2009 J jnl
DISPARE: DIScriminative PAttern REfinement for Position Weight Matrices.
BMC Bioinform.
Isabelle da Piedade, Man-Hung Eric Tang, Olivier Elemento
2007 — ch.
Reconstructing the duplication history of tandemly repeated sequences.
Mathematics of Evolution and Phylogeny
Olivier Gascuel, Denis Bertrand, Olivier Elemento
2005 J jnl
An exact and polynomial distance-based algorithm to reconstruct single copy tandem duplication trees.
J. Discrete Algorithms
Olivier Elemento, Olivier Gascuel
2005 J jnl
Revealing Posttranscriptional Regulatory Elements Through Network-Level Conservation.
PLoS Comput. Biol.
Chang S. Chan, Olivier Elemento, Saeed Tavazoie
2003 B conf
An Exact and Polynomial Distance-Based Algorithm to Reconstruct Single Copy Tandem Duplication Trees.
CPM
Olivier Elemento, Olivier Gascuel
2002 C conf
An efficient and accurate distance based algorithm to reconstruct tandem duplication trees.
ECCB
Olivier Elemento, Olivier Gascuel