Olivier Dameron

44 papers B 3C 1Misc 6Journal 14Unranked 19

Year	Rank	Type	Title / Venue / Authors
2024	—	`conf`	Phenotypes Extraction from Text: Analysis and Perspective in the LLM Era. IS Moussa Baddour, Stéphane Paquelet, Paul Rollier, Marie de Tayrac, Olivier Dameron, Thomas Labbé
2024	J	`jnl`	Regulus infers signed regulatory relations from few samples' information using discretization and likelihood constraints. PLoS Comput. Biol. Marine Louarn, Guillaume Collet, Ève Barré, Thierry Fest, Olivier Dameron, Anne Siegel, Fabrice Chatonnet
2023	J	`jnl`	Fixing molecular complexes in BioPAX standards to enrich interactions and detect redundancies using semantic web technologies. Bioinform. Camille Juigné, Olivier Dameron, François Moreews, Florence Gondret, Emmanuelle Becker
2022	J	`jnl`	Improving reusability along the data life cycle: a regulatory circuits case study. J. Biomed. Semant. Marine Louarn, Fabrice Chatonnet, Xavier Garnier, Thierry Fest, Anne Siegel, Catherine Faron, Olivier Dameron
2022	J	`jnl`	Towards a reproducible interactome: semantic-based detection of redundancies to unify protein-protein interaction databases. Bioinform. Marc Melkonian, Camille Juigné, Olivier Dameron, Gwenaël Rabut, Emmanuelle Becker
2021	—	`conf`	An Extension of Chronicles Temporal Model with Taxonomies: Application to Epidemiological Studies. HEALTHINF Johanne Bakalara, Thomas Guyet, Olivier Dameron, André Happe, Emmanuel Oger
2019	—	`conf`	Increasing Life Science Resources Re-Usability using Semantic Web Technologies. eScience Marine Louarn, Fabrice Chatonnet, Xavier Garnier, Thierry Fest, Anne Siegel, Olivier Dameron
2019	J	`jnl`	queryMed: Semantic Web functions for linking pharmacological and medical knowledge to data. Bioinform. Yann Rivault, Olivier Dameron, Nolwenn Le Meur
2018	—	`conf`	Converting Alzheimer's Disease Map into a Heavyweight Ontology: A Formal Network to Integrate Data. DILS Vincent Henry, Ivan Moszer, Olivier Dameron, Marie-Claude Potier, Martin Hofmann-Apitius, Olivier Colliot
2018	J	`jnl`	Traceability, reproducibility and wiki-exploration for "à-la-carte" reconstructions of genome-scale metabolic models. PLoS Comput. Biol. Méziane Aite, Marie Chevallier, Clémence Frioux, Camille Trottier, Jeanne Got, María Paz Cortés, Sebastián Nelson Mendoza, Grégory Carrier, Olivier Dameron, Nicolas Guillaudeux, Mauricio Latorre, Nicolás Loira, Gabriel V. Markov, Alejandro Maass, Anne Siegel
2017	B	`conf`	A Similarity Measure Based on Care Trajectories as Sequences of Sets. AIME Yann Rivault, Nolwenn Le Meur, Olivier Dameron
2017	—	`conf`	Identifying Functional Families of Trajectories in Biological Pathways by Soft Clustering: Application to TGF-β Signaling. CMSB Jean Coquet, Nathalie Théret, Vincent Legagneux, Olivier Dameron
2016	—	`book`	Ontology-based methods for analyzing life science data. Olivier Dameron
2015	J	`jnl`	Ontology for assessment studies of human-computer-interaction in surgery. Artif. Intell. Medicine Andrej Machno, Pierre Jannin, Olivier Dameron, Werner Korb, Gerik Scheuermann, Jürgen Meixensberger
2014	J	`jnl`	Temporal representation of care trajectories of cancer patients using data from a regional information system: an application in breast cancer. BMC Medical Informatics Decis. Mak. Gautier Defossez, Alexandre Rollet, Olivier Dameron, Pierre Ingrand
2013	J	`jnl`	A unified structural/terminological interoperability framework based on LexEVS: application to TRANSFoRm. J. Am. Medical Informatics Assoc. Jean-François Ethier, Olivier Dameron, Vasa Curcin, Mark M. McGilchrist, Robert A. Verheij, Theodoros N. Arvanitis, Adel Taweel, Brendan Delaney, Anita Burgun
2013	J	`jnl`	OWL model of clinical trial eligibility criteria compatible with partially-known information. J. Biomed. Semant. Olivier Dameron, Paolo Besana, Oussama Zekri, Annabel Bourde, Anita Burgun, Marc Cuggia
2012	—	`conf`	ATOL: The Multi-species Livestock Trait Ontology. MTSR Wiktoria Golik, Olivier Dameron, Jérôme Bugeon, Alice Fatet, Isabelle Hue, Catherine Hurtaud, Matthieu Reichstadt, Marie-Christine Salaün, Jean Vernet, Léa Joret, Frédéric Papazian, Claire Nedellec, Pierre-Yves Le Bail
2012	—	`conf`	Comparing Drools and ontology reasoning approaches for telecardiology decision support. MIE Pascal Van Hille, Julie Jacques, Julien Taillard, Arnaud Rosier, David Delerue, Anita Burgun, Olivier Dameron
2012	J	`jnl`	GO2PUB: Querying PubMed with semantic expansion of gene ontology terms. J. Biomed. Semant. Charles Bettembourg, Christian Diot, Anita Burgun, Olivier Dameron
2012	—	`conf`	OWL Model of Clinical Trial Eligibility Criteria Compatible with Partially-known Information. SWAT4LS Olivier Dameron, Paolo Besana, Oussama Zekri, Annabel Bourde, Anita Burgun, Marc Cuggia
2010	J	`jnl`	Achieving High Research Reporting Quality Through the Use of Computational Ontologies. Neuroinformatics Amrapali Zaveri, Luciana Cofiel, Jatin Shah, Shreyasee S. Pradhan, Edwin Chan, Olivier Dameron, Ricardo Pietrobon, Beng Ti Ang
2010	—	`conf`	Mapping BFO and DOLCE. MedInfo Lynda Temal, Arnaud Rosier, Olivier Dameron, Anita Burgun
2010	C	`conf`	Verification of parameters semantic compatibility for semi-automatic web service composition: a generic case study. iiWAS Nicolas Lebreton, Christophe Blanchet, Daniela Barreiro Claro, Julie Chabalier, Anita Burgun, Olivier Dameron
2009	—	`conf`	Testing Tactics to Localize De-Identification. MIE Cyril Grouin, Arnaud Rosier, Olivier Dameron, Pierre Zweigenbaum
2008	—	`conf`	Bio-ontologies Tutorial. DILS Olivier Dameron, Julie Chabalier
2008	—	`conf`	Gene Regulation Ontology (GRO): Design Principles and Use Cases. MIE Elena Beisswanger, Vivian Lee, Jung-Jae Kim, Dietrich Rebholz-Schuhmann, Andrea Splendiani, Olivier Dameron, Stefan Schulz, Udo Hahn
2007	Misc	`conf`	Grading glioma tumors using OWL-DL and NCI Thesaurus. AMIA Gwenaëlle Marquet, Olivier Dameron, Stephan Saikali, Jean Mosser, Anita Burgun
2007	J	`jnl`	Using semantic dependencies for consistency management of an ontology of brain-cortex anatomy. Artif. Intell. Medicine Olivier Dameron, Mark A. Musen, Bernard Gibaud
2006	J	`jnl`	Using ontologies linked with geometric models to reason about penetrating injuries. Artif. Intell. Medicine Daniel L. Rubin, Olivier Dameron, Yasser Bashir, David Grossman, Parvati Dev, Mark A. Musen
2005	Misc	`conf`	Challenges in Converting Frame-Based Ontology into OWL: the Foundational Model of Anatomy Case-Study. AMIA Olivier Dameron, Daniel L. Rubin, Mark A. Musen
2005	Misc	`conf`	Protégé-OWL: Creating Ontology-Driven Reasoning Applications with the Web Ontology Language. AMIA Daniel L. Rubin, Holger Knublauch, Ray W. Fergerson, Olivier Dameron, Mark A. Musen
2005	—	`conf`	Use Case: Ontology with Rules for identifying brain anatomical structures. Rule Languages for Interoperability Christine Golbreich, Olivier Bierlaire, Olivier Dameron, Bernard Gibaud
2005	Misc	`conf`	Use of Description Logic Classification to Reason about Consequences of Penetrating Injuries. AMIA Daniel L. Rubin, Olivier Dameron, Mark A. Musen
2004	—	`conf`	Accessing and Manipulating Ontologies Using Web Services. SWS@ISWC Olivier Dameron, Natalya Fridman Noy, Holger Knublauch, Mark A. Musen
2004	—	`conf`	Using semantic dependencies for consistency management of an ontology of brain-cortex anatomy. KR-MED Olivier Dameron, Bernard Gibaud, Mark A. Musen
2004	—	`conf`	Weaving the biomedical Semantic Web with the Prote'ge' OWL Plugin. KR-MED Holger Knublauch, Olivier Dameron, Mark A. Musen
2003	B	`conf`	How to Represent Medical Ontologies in View of a Semantic Web? AIME Christine Golbreich, Olivier Dameron, Bernard Gibaud, Anita Burgun
2003	—	`conf`	Modelling dependencies between relations to ensure consistency of a cerebral cortex anatomy knowledge base. MIE Olivier Dameron, Anita Burgun, Xavier Morandi, Bernard Gibaud
2003	—	`conf`	Re-use of a multi-purpose knowledge corpus on cortex anatomy for educational purposes. MIE Bernard Gibaud, Olivier Dameron, Xavier Morandi
2003	Misc	`conf`	Web Ontology Language Requirements w.r.t Expressiveness of Taxonomy and Axioms in Medicine. ISWC Christine Golbreich, Olivier Dameron, Bernard Gibaud, Anita Burgun
2002	Misc	`conf`	Towards a sharable numeric and symbolic knowledge base on cerebral cortex anatomy: lessons learned from a prototype. AMIA Olivier Dameron, Bernard Gibaud, Anita Burgun, Xavier Morandi
2001	B	`conf`	Numeric and Symbolic Knowledge Representation of Cortex Anatomy Using Web Technologies. AIME Olivier Dameron, Bernard Gibaud, Xavier Morandi
2001	—	`conf`	Representing and sharing numeric and symbolic knowledge of brain cortex anatomy using web technology. CARS Bernard Gibaud, Olivier Dameron, Xavier Morandi