Oliver Rippel

26 papers B 1C 5Journal 11Unranked 8
YearRankTypeTitle / Venue / Authors
2023 J jnl
CoRR
João Santos, Triet Tran, Oliver Rippel
2023 J jnl
Medical Image Anal.
Patrick Bilic, Patrick Ferdinand Christ, Hongwei Li, Eugene Vorontsov, Avi Ben-Cohen, Georgios Kaissis, Adi Szeskin, Colin Jacobs, Gabriel Efrain Humpire Mamani, Gabriel Chartrand, Fabian Lohöfer, Julian Walter Holch, Wieland H. Sommer, Felix Hofmann, Alexandre Hostettler, Naama Lev-Cohain, Michal Drozdzal, Michal Marianne Amitai, Refael Vivanti, Jacob Sosna, Ivan Ezhov, Anjany Sekuboyina, Fernando Navarro, Florian Kofler, Johannes C. Paetzold, Suprosanna Shit, Xiaobin Hu, Jana Lipková, Markus Rempfler, Marie Piraud, Jan Kirschke, Benedikt Wiestler, Zhiheng Zhang, Christian Hülsemeyer, Marcel Beetz, Florian Ettlinger, Michela Antonelli, Woong Bae, Miriam Bellver, Lei Bi, Hao Chen, Grzegorz Chlebus, Erik B. Dam, Qi Dou, Chi-Wing Fu, Bogdan Georgescu, Xavier Giró-i-Nieto, Felix Grün, Xu Han, Pheng-Ann Heng, Jürgen Hesser, Jan Hendrik Moltz, Christian Igel, Fabian Isensee, Paul Jäger, Fucang Jia, Krishna Chaitanya Kaluva, Mahendra Khened, Ildoo Kim, Jae-Hun Kim, Sungwoong Kim, Simon Kohl, Tomasz K. Konopczynski, Avinash Kori, Ganapathy Krishnamurthi, Fan Li, Hongchao Li, Junbo Li, Xiaomeng Li, John S. Lowengrub, Jun Ma, Klaus H. Maier-Hein, Kevis-Kokitsi Maninis, Hans Meine, Dorit Merhof, Akshay Pai, Mathias Perslev, Jens Petersen, Jordi Pont-Tuset, Jin Qi, Xiaojuan Qi, Oliver Rippel, Karsten Roth, Ignacio Sarasua, Andrea Schenk, Zengming Shen, Jordi Torres, Christian Wachinger, Chunliang Wang, Leon Weninger, Jianrong Wu, Daguang Xu, Xiaoping Yang, Simon Chun-Ho Yu, Yading Yuan, Miao Yue, Liping Zhang, Manuel Jorge Cardoso, Spyridon Bakas, Rickmer Braren, Volker Heinemann, Christopher Pal, An Tang, Samuel Kadoury, Luc Soler, Bram van Ginneken, Hayit Greenspan, Leo Joskowicz, Bjoern H. Menze
2022 conf
VISIGRAPP (5: VISAPP)
Oliver Rippel, Sergen Gülçelik, Khosrow Rahimi, Juliana Kurniadi, Andreas Herrmann, Dorit Merhof
2022 J jnl
Sensors
Oliver Rippel, Corinna Zwinge, Dorit Merhof
2022 conf
I2MTC
Oliver Rippel, Nikolaj Schönfelder, Khosrow Rahimi, Juliana Kurniadi, Andreas Herrmann, Dorit Merhof
2022 conf
IMPROVE
Oliver Rippel, Arnav Chavan, Chucai Lei, Dorit Merhof
2022
Oliver Rippel
2021 C conf
ETFA
Oliver Rippel, Peter Haumering, Johannes Brauers, Dorit Merhof
2021 J jnl
Comput. Biol. Medicine
Tobias Piotrowski, Oliver Rippel, Andreas Elanzew, Bastian Nießing, Sebastian Stucken, Sven Jung, Niels König, Simone Haupt, Laura Stappert, Oliver Brüstle, Robert H. Schmitt, Stephan M. Jonas
2021 C conf
ICPRAM
Oliver Rippel, Maximilian Müller, Andreas Münkel, Thomas Gries, Dorit Merhof
2021 J jnl
IEEE Trans. Instrum. Meas.
Oliver Rippel, Patrick Mertens, Eike König, Dorit Merhof
2021 conf
I2MTC
Oliver Rippel, Niclas Bilitewski, Khosrow Rahimi, Juliana Kurniadi, Andreas Herrmann, Dorit Merhof
2021 C conf
ETFA
Oliver Rippel, Dorit Merhof
2021 J jnl
CoRR
Michela Antonelli, Annika Reinke, Spyridon Bakas, Keyvan Farahani, Annette Kopp-Schneider, Bennett A. Landman, Geert Litjens, Bjoern H. Menze, Olaf Ronneberger, Ronald M. Summers, Bram van Ginneken, Michel Bilello, Patrick Bilic, Patrick Ferdinand Christ, Richard K. G. Do, Marc Gollub, Stephan Heckers, Henkjan J. Huisman, William R. Jarnagin, Maureen McHugo, Sandy Napel, Jennifer Goli-Pernicka, Kawal S. Rhode, Catalina Tobon-Gomez, Eugene Vorontsov, James A. Meakin, Sébastien Ourselin, Manuel Wiesenfarth, Pablo Arbeláez, Byeonguk Bae, Sihong Chen, Laura Alexandra Daza, Jianjiang Feng, Baochun He, Fabian Isensee, Yuanfeng Ji, Fucang Jia, Namkug Kim, Ildoo Kim, Dorit Merhof, Akshay Pai, BeomHee Park, Mathias Perslev, Ramin Rezaiifar, Oliver Rippel, Ignacio Sarasua, Wei Shen, Jaemin Son, Christian Wachinger, Liansheng Wang, Yan Wang, Yingda Xia, Daguang Xu, Zhanwei Xu, Yefeng Zheng, Amber L. Simpson, Lena Maier-Hein, M. Jorge Cardoso
2021 J jnl
CoRR
Oliver Rippel, Arnav Chavan, Chucai Lei, Dorit Merhof
2020 C conf
ETFA
Dieter Geller, Tarek Stiebel, Oliver Rippel, Jonas Osburg, Volker Lutz, Thomas Gries, Dorit Merhof
2020 J jnl
CoRR
Oliver Rippel, Leon Weninger, Dorit Merhof
2020 conf
I2MTC
Oliver Rippel, Maximilian Schnabel, Georg-Philipp Paar, Thomas Gries, Dorit Merhof
2020 C conf
ETFA
Oliver Rippel, Maximilian Müller, Dorit Merhof
2020 B conf
ICPR
Oliver Rippel, Patrick Mertens, Dorit Merhof
2020 J jnl
CoRR
Oliver Rippel, Patrick Mertens, Dorit Merhof
2019 J jnl
J. Open Source Softw.
Christoph Haarburger, Justus Schock, Michael Baumgartner, Oliver Rippel, Dorit Merhof
2019 conf
ISBI
Christoph Haarburger, Philippe Weitz, Oliver Rippel, Dorit Merhof
2019 conf
Bildverarbeitung für die Medizin
Oliver Rippel, Daniel Truhn, Johannes Thüring, Christoph Haarburger, Christiane K. Kuhl, Dorit Merhof
2018 J jnl
CoRR
Christoph Haarburger, Philippe Weitz, Oliver Rippel, Dorit Merhof
2018 conf
BrainLes@MICCAI (2)
Leon Weninger, Oliver Rippel, Simon Koppers, Dorit Merhof
redb/extractors/decompiler/bninja/similarity/minhasher.py
← Index redb/extractors/decompiler/bninja/similarity/minhasher.py python
import logging
import random
from enum import Enum

from ..analysis.medium_level_normalization import MediumLevelNormalization

try:
    from .minhashcustom import MinHashCustom
    from ..analysis.low_level_normalization import LowLevelNormalization
except ImportError:
    # Fallback to absolute imports (for multiprocessing spawned processes)
    from redb.extractors.decompiler.bninja.similarity.minhashcustom import MinHashCustom
    from redb.extractors.decompiler.bninja.analysis.low_level_normalization import LowLevelNormalization

## Values for this configuration were extracted from https://github.com/danielplohmann/mcrit/blob/main/mcrit/config/MinHashConfig.py#L10
# Length in number of Shingles of which a minhash consists
# this value represents the length of sha256sum hash truncated
MINHASH_SIGNATURE_LENGTH: int = 64
# Number of bits per signature element (1-32 bits)
MINHASH_SIGNATURE_BITS: int = 8


class TokenKind(Enum):
    LLIL = "llil"
    TYPED_LLIL = "typed_llil"
    MLIL = "mlil"
    TYPED_MLIL = "typed_mlil"


class MinHasher:
    # stick to the default method
    MINHASH_STRATEGY_HASH_ALL = 1

    def __init__(self, seed, il_function, kind: TokenKind = TokenKind.LLIL):
        self._minhash_seeds = []
        self.il_func = il_function
        self.kind = kind
        self._minhash_permutation = []
        self._signature_segments = []
        self._initMinhashing(seed)

    def _initMinhashing(self, MINHASH_SEED=None):
        random.seed(MINHASH_SEED)
        # init sequence of seeds
        self._minhash_seeds = [
            random.randint(0, MinHashCustom.getHashMax()) for _ in range(MINHASH_SIGNATURE_LENGTH)
        ]

    def make_ngrams(self, tokens, n=3):
        """Take the ngrams of the IL we try to pass into the functions"""
        return [tuple(tokens[i:i+n]) for i in range(len(tokens) - n + 1)]

    def _extract_tokens(self):
        """Extract the IL tokens from the IL function, picking the right
        normalizer (LLIL/MLIL) and the right normalization mode
        (skeleton/typed) based on self.kind."""
        if self.kind in (TokenKind.LLIL, TokenKind.TYPED_LLIL):
            normalizer = LowLevelNormalization()
        elif self.kind in (TokenKind.MLIL, TokenKind.TYPED_MLIL):
            normalizer = MediumLevelNormalization()
        else:
            raise ValueError(f"Unsupported token kind: {self.kind}")

        # typed variants include operand type info, skeleton variants don't
        if self.kind in (TokenKind.TYPED_LLIL, TokenKind.TYPED_MLIL):
            normalize = normalizer.normalize_instr_with_operands
        else:
            normalize = normalizer.normalize_instruction_all_levels

        instructions = []
        for basic_block in self.il_func.basic_blocks:
            for il in basic_block:
                instructions.append(normalize(il))

        return instructions

    def calculateMinHash(self):
        """Calculate hash function every time, then take minimum shingle per shingler"""
        minhash_result = MinHashCustom(minhash_bits=MINHASH_SIGNATURE_BITS)
        minhash_signature = []

        tokens = self._extract_tokens()
        shingles = self.make_ngrams(tokens, n=3)

        # Functions with fewer than 3 IL instructions can't produce n-grams
        # Return empty minhash for such small functions (thunks, stubs, etc.)
        # Triggered by 39d8ad95b0323c37bd3134ab93ac4af44c66a1a8443a41c1ac02cec19bb2816a
        if not shingles:
            return []

        # Generate the MinHash
        for seed in self._minhash_seeds:
            hashed_shingles = [
                self.shingle_hash(shingle, seed) for shingle in shingles
            ]
            min_value = min(hashed_shingles)

            if MINHASH_SIGNATURE_BITS < 32:
                min_value %= (2 ** MINHASH_SIGNATURE_BITS)

            minhash_signature.append(min_value)

        minhash_result.setMinHash(minhash_signature)
        return minhash_result.getMinHashInt()

    def shingle_hash(self, shingle, hash_seed=0):
        """Produce a single 32bit UINT hash for a given shingle"""
        return MinHashCustom.hashData(shingle, hash_seed)