Olgun Guvench

11 papers Journal 9Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
On the Use of PDB X-Ray Crystal Structures as Force Field Target and Validation Data for Pyranose Ring Puckering.
J. Comput. Chem.
Olgun Guvench, Andrew L. Straffin
2017 J jnl
Rigidity and flexibility in the tetrasaccharide linker of proteoglycans from atomic-resolution molecular simulation.
J. Comput. Chem.
Cathy Ng, Padmavathy Nandha Premnath, Olgun Guvench
2013 — conf
New atomic resolution insights into dynamic protein-carbohydrate interactions enabled by high-performance computing.
XSEDE
Olgun Guvench
2012 J jnl
Balancing target flexibility and target denaturation in computational fragment-based inhibitor discovery.
J. Comput. Chem.
Theresa J. Foster, Alexander D. MacKerell Jr., Olgun Guvench
2011 J jnl
Reproducing Crystal Binding Modes of Ligand Functional Groups Using Site-Identification by Ligand Competitive Saturation (SILCS) Simulations.
J. Chem. Inf. Model.
E. Prabhu Raman, Wenbo Yu, Olgun Guvench, Alexander D. MacKerell Jr.
2010 J jnl
CHARMM general force field: A force field for drug-like molecules compatible with the CHARMM all-atom additive biological force fields.
J. Comput. Chem.
Kenno Vanommeslaeghe, Elizabeth Hatcher, Chayan Acharya, Sibsankar Kundu, Shijun Zhong, Jihyun Shim, Eva Darian, Olgun Guvench, Pedro E. M. Lopes, Igor Vorobyov, Alexander D. MacKerell Jr.
2009 J jnl
Computational Fragment-Based Binding Site Identification by Ligand Competitive Saturation.
PLoS Comput. Biol.
Olgun Guvench, Alexander D. MacKerell Jr.
2008 J jnl
Additive empirical force field for hexopyranose monosaccharides.
J. Comput. Chem.
Olgun Guvench, Shannon N. Greene, Ganesh Kamath, John W. Brady, Richard M. Venable, Richard W. Pastor, Alexander D. MacKerell Jr.
2007 — conf
Enhanced password authentication through keystroke typing characteristics.
Artificial Intelligence and Applications
Olgun Guvench, Selim Akyokus, Mitat Uysal, Aykut Güven
2004 J jnl
Efficient approximate all-atom solvent accessible surface area method parameterized for folded and denatured protein conformations.
J. Comput. Chem.
Olgun Guvench, Charles L. Brooks III
2002 J jnl
Application of the frozen atom approximation to the GB/SA continuum model for solvation free energy.
J. Comput. Chem.
Olgun Guvench, Jörg Weiser, Peter S. Shenkin, István Kolossváry, W. Clark Still