Olga I. Zolotareva

20 papers A* 1Journal 17Unranked 1
YearRankTypeTitle / Venue / Authors
2026 J jnl
Farthest better or nearest worse optimizer: a novel metaheuristic algorithm.
Artif. Intell. Rev.
Ahmad Taheri, Keyvan RahimiZadeh, Jan Baumbach, Amin Beheshti, Olga I. Zolotareva, Mohammed Azmi Al-Betar, Seyedali Mirjalili, Amir H. Gandomi
2025 J jnl
Privacy-preserving multicenter differential protein abundance analysis with FedProt.
Nat. Comput. Sci.
Yuliya Burankova, Miriam Abele, Mohammad Bakhtiari, Christine von Törne, Teresa Barth, Lisa Schweizer, Pieter Giesbertz, Johannes R. Schmidt, Stefan Kalkhof, Janina Müller-Deile, Peter A. van Veelen, Yassene Mohammed, Elke Hammer, Lis Arend, Klaudia Adamowicz, Tanja Laske, Anne Hartebrodt, Tobias Frisch, Chen Meng, Julian O. Matschinske, Julian Späth, Richard Röttger, Veit Schwämmle, Stefanie M. Hauck, Stefan F. Lichtenthaler, Axel Imhof, Matthias Mann, Christina Ludwig, Bernhard Küster, Jan Baumbach, Olga I. Zolotareva
2025 J jnl
Systematic evaluation of normalization approaches in tandem mass tag and label-free protein quantification data using PRONE.
Briefings Bioinform.
Lis Arend, Klaudia Adamowicz, Johannes R. Schmidt, Yuliya Burankova, Olga I. Zolotareva, Olga Tsoy, Josch Konstantin Pauling, Stefan Kalkhof, Jan Baumbach, Markus List, Tanja Laske
2024 J jnl
FedRBE - a decentralized privacy-preserving federated batch effect correction tool for omics data based on limma.
CoRR
Yuliya Burankova, Julian Klemm, Jens Johann Georg Lohmann, Ahmad Taheri, Niklas Probul, Jan Baumbach, Olga I. Zolotareva
2024 — conf
NeDRex-Web: An Interactive Web Tool for Drug Repurposing by Exploring Heterogeneous Molecular Networks.
BIBM
Andreas Maier, Mahdie Rafiei, Elisa Anastasi, Olga I. Zolotareva, James Skelton, Maria L. Elkjaer, Ana I. Casas, Cristian Nogales, Harald H. H. W. Schmidt, Tim Kacprowski, David B. Blumenthal, Anil Wipat, Sepideh Sadegh, Jan Baumbach
2024 J jnl
Privacy-Preserving Multi-Center Differential Protein Abundance Analysis with FedProt.
CoRR
Yuliya Burankova, Miriam Abele, Mohammad Bakhtiari, Christine von Törne, Teresa Barth, Lisa Schweizer, Pieter Giesbertz, Johannes R. Schmidt, Stefan Kalkhof, Janina Müller-Deile, Peter A. van Veelen, Yassene Mohammed, Elke Hammer, Lis Arend, Klaudia Adamowicz, Tanja Laske, Anne Hartebrodt, Tobias Frisch, Chen Meng, Julian O. Matschinske, Julian Späth, Richard Röttger, Veit Schwämmle, Stefanie M. Hauck, Stefan F. Lichtenthaler, Axel Imhof, Matthias Mann, Christina Ludwig, Bernhard Küster, Jan Baumbach, Olga I. Zolotareva
2024 J jnl
UnPaSt: unsupervised patient stratification by differentially expressed biclusters in omics data.
CoRR
Michael Hartung, Andreas Maier, Fernando M. Delgado-Chaves, Yuliya Burankova, Olga I. Isaeva, Fábio Malta de Sá Patroni, Daniel He, Casey Shannon, Katharina Kaufmann, Jens Johann Georg Lohmann, Alexey Savchik, Anne Hartebrodt, Zoe Chervontseva, Farzaneh Firoozbakht, Niklas Probul, Evgenia Zotova, Olga Tsoy, David B. Blumenthal, Martin Ester, Tanja Laske, Jan Baumbach, Olga I. Zolotareva
2022 J jnl
Cancer driver drug interaction explorer.
Nucleic Acids Res.
Michael Hartung, Elisa Anastasi, Zeinab M. Mamdouh, Cristian Nogales, Harald H. H. W. Schmidt, Jan Baumbach, Olga I. Zolotareva, Markus List
2022 J jnl
Federated Random Forests can improve local performance of predictive models for various healthcare applications.
Bioinform.
Anne-Christin Hauschild, Marta Lemanczyk, Julian O. Matschinske, Tobias Frisch, Olga I. Zolotareva, Andreas Holzinger, Jan Baumbach, Dominik Heider
2021 — —
Identification of Differentially Expressed Gene Modules in Heterogeneous Diseases
Olga I. Zolotareva
2021 J jnl
Identification of differentially expressed gene modules in heterogeneous diseases.
Bioinform.
Olga I. Zolotareva, Sahand Khakabimamaghani, Olga I. Isaeva, Zoe Chervontseva, Alexey Savchik, Martin Ester
2021 A* conf
Interpretable Drug Response Prediction using a Knowledge-based Neural Network.
KDD
Oliver Snow, Hossein Sharifi-Noghabi, Jialin Lu, Olga I. Zolotareva, Mark Lee, Martin Ester
2021 J jnl
Out-of-distribution generalization from labelled and unlabelled gene expression data for drug response prediction.
Nat. Mach. Intell.
Hossein Sharifi-Noghabi, Parsa Alamzadeh Harjandi, Olga I. Zolotareva, Colin C. Collins, Martin Ester
2021 J jnl
The FeatureCloud AI Store for Federated Learning in Biomedicine and Beyond.
CoRR
Julian O. Matschinske, Julian Späth, Reza Nasirigerdeh, Reihaneh Torkzadehmahani, Anne Hartebrodt, Balázs Orbán, Sándor Fejér, Olga I. Zolotareva, Mohammad Bakhtiari, Béla Bihari, Marcus D. Bloice, Nina C. Donner, Walid Fdhila, Tobias Frisch, Anne-Christin Hauschild, Dominik Heider, Andreas Holzinger, Walter Hötzendorfer, Jan Hospes, Tim Kacprowski, Markus Kastelitz, Markus List, Rudolf Mayer, Mónika Moga, Heimo Müller, Anastasia Pustozerova, Richard Röttger, Anna Saranti, Harald H. H. W. Schmidt, Christof Tschohl, Nina Kerstin Wenke, Jan Baumbach
2020 J jnl
AITL: Adversarial Inductive Transfer Learning with input and output space adaptation for pharmacogenomics.
Bioinform.
Hossein Sharifi-Noghabi, Shuman Peng, Olga I. Zolotareva, Colin C. Collins, Martin Ester
2019 J jnl
A Survey of Gene Prioritization Tools for Mendelian and Complex Human Diseases.
J. Integr. Bioinform.
Olga I. Zolotareva, Maren Kleine
2019 J jnl
MOLI: multi-omics late integration with deep neural networks for drug response prediction.
Bioinform.
Hossein Sharifi-Noghabi, Olga I. Zolotareva, Colin C. Collins, Martin Ester
2018 J jnl
GenCoNet - A Graph Database for the Analysis of Comorbidities by Gene Networks.
J. Integr. Bioinform.
Alban Shoshi, Ralf Hofestädt, Olga I. Zolotareva, Marcel Friedrichs, Alex Maier, Vladimir A. Ivanisenko, Victor E. Dosenko, Elena Yu. Bragina
2018 J jnl
Molecular Relationships between Bronchial Asthma and Hypertension as Comorbid Diseases.
J. Integr. Bioinform.
Elena Yu. Bragina, Irina A. Goncharova, Anna F. Garaeva, Evgeniy V. Nemerov, Anastasija A. Babovskaya, Andrey B. Karpov, Yulia V. Semenova, Irina Z. Zhalsanova, Densema E. Gomboeva, Olga V. Saik, Olga I. Zolotareva, Vladimir A. Ivanisenko, Victor E. Dosenko, Ralf Hofestädt, Maxim B. Freidin
2018 J jnl
Search for New Candidate Genes Involved in the Comorbidity of Asthma and Hypertension Based on Automatic Analysis of Scientific Literature.
J. Integr. Bioinform.
Olga V. Saik, Pavel S. Demenkov, Timofey V. Ivanisenko, Elena Yu. Bragina, Maxim B. Freidin, Victor E. Dosenko, Olga I. Zolotareva, Evgeniy L. Choynzonov, Ralf Hofestädt, Vladimir A. Ivanisenko