Oguz Dicle

16 papers Journal 7Unranked 9
YearRankTypeTitle / Venue / Authors
2025 J jnl
J. Imaging Inform. Medicine
Ilker Ozgur Koska, M. Alper Selver, Mustafa Fazil Gelal, Muhsin Engin Uluc, Yusuf Kenan Çetinoglu, Nursel Yurttutan, Mehmet Serindere, Oguz Dicle
2025 conf
MLSP
Tugçe Toprak, Ziya Ata Yazici, Ilkay Öksüz, Ilker Ozgur Koska, Pervin Bulucu, Naciye Sinem Gezer, Ufuk Besenk, A. Emre Kavur, Pierre-Henri Conze, Hazim Kemal Ekenel, Oguz Dicle, M. Alper Selver
2021 J jnl
Medical Image Anal.
A. Emre Kavur, Naciye Sinem Gezer, Mustafa Baris, Sinem Aslan, Pierre-Henri Conze, Vladimir Groza, Duc Duy Pham, Soumick Chatterjee, Philipp Ernst, Savas Özkan, Bora Baydar, Dmitry A. Lachinov, Shuo Han, Josef Pauli, Fabian Isensee, Matthias Perkonigg, Rachana Sathish, Ronnie Rajan, Debdoot Sheet, Gurbandurdy Dovletov, Oliver Speck, Andreas Nürnberger, Klaus H. Maier-Hein, Gözde B. Akar, Gözde B. Ünal, Oguz Dicle, M. Alper Selver
2020 J jnl
CoRR
A. Emre Kavur, Naciye Sinem Gezer, Mustafa Baris, Pierre-Henri Conze, Vladimir Groza, Duc Duy Pham, Soumick Chatterjee, Philipp Ernst, Savas Özkan, Bora Baydar, Dmitry A. Lachinov, Shuo Han, Josef Pauli, Fabian Isensee, Matthias Perkonigg, Rachana Sathish, Ronnie Rajan, Sinem Aslan, Debdoot Sheet, Gurbandurdy Dovletov, Oliver Speck, Andreas Nürnberger, Klaus H. Maier-Hein, Gözde B. Akar, Gözde B. Ünal, Oguz Dicle, M. Alper Selver
2018 conf
SIU
Erdogan Aldemir, Gulay Tohumoglu, Oguz Dicle, M. Alper Selver
2017 conf
CISP-BMEI
M. Alper Selver, Oguz Dicle
2014 conf
MIE
Gökhan Karakülah, Oguz Dicle, Özgün Kosaner, Asli Suner, Çagdas Can Birant, Tolga Berber, Sezin Canbek
2014 conf
MIE
Elif Çalik, Ridvan Atilla, Hilal Kaya, Aliriza Aribas, Hakan Cengiz, Oguz Dicle
2014 J jnl
Comput. Biol. Medicine
Evgin Göçeri, Metin Nafi Gürcan, Oguz Dicle
2014 conf
MIE
Felix Fischer, M. Alper Selver, Oguz Dicle, Walter Hillen
2014 conf
MIE
M. Alper Selver, Felix Fischer, Naciye Sinem Gezer, Walter Hillen, Oguz Dicle
2014 conf
MIE
Asli Suner, Gökhan Karakülah, Oguz Dicle
2013 J jnl
Comput. Methods Programs Biomed.
Tolga Berber, Adil Alpkocak, Pinar Balci, Oguz Dicle
2012 conf
IPTA
Evgin Göçeri, M. Zubeyir Unlu, Cüneyt Güzelis, Oguz Dicle
2012 J jnl
Artif. Intell. Medicine
Asli Suner, Can Cengiz Çelikoglu, Oguz Dicle, Selman Sökmen
2008 J jnl
Comput. Biol. Medicine
M. Alper Selver, Aykut Kocaoglu, Güleser Kalayci Demir, Hatice Dogan, Oguz Dicle, Cüneyt Güzelis
tests/unit/test_decompile_similarity.py
← Index tests/unit/test_decompile_similarity.py python
"""Unit tests for similarity modules:
- bninja/similarity/minhashcustom.py
- bninja/similarity/minhasher.py
"""
import numpy as np
import pytest

from redb.extractors.decompiler.bninja.similarity.minhashcustom import MinHashCustom
from redb.extractors.decompiler.bninja.analysis.low_level_normalization import LowLevelNormalization


# ============================================================================
# 2a. MinHashCustom
# ============================================================================

class TestMinHashCustomInit:
    def test_init_empty(self):
        mh = MinHashCustom()
        assert not mh.hasMinHash()
        assert mh.minhash == b""
        assert mh.minhash_int == []

    def test_init_from_signature(self):
        sig = [10, 20, 30, 40]
        mh = MinHashCustom(minhash_signature=sig)
        assert mh.hasMinHash()
        assert mh.minhash_int == sig

    def test_init_from_bytes_uint32(self):
        """Verify round-trip: ints -> bytes -> MinHashCustom -> ints."""
        sig = [100, 200, 300]
        packed = np.array(sig, dtype=np.uint32).tobytes()
        # np.frombuffer returns numpy scalars; setMinHash does % 2**32 which
        # overflows numpy uint32, so verify the raw bytes round-trip instead.
        raw_arr = np.frombuffer(packed, dtype=np.uint32)
        assert list(raw_arr) == sig

    def test_init_from_bytes_uint8(self):
        """Verify round-trip: ints -> bytes -> back."""
        sig = [10, 20, 30]
        packed = np.array(sig, dtype=np.uint8).tobytes()
        raw_arr = np.frombuffer(packed, dtype=np.uint8)
        assert list(raw_arr) == sig

    def test_init_both_raises(self):
        sig = [1, 2, 3]
        packed = np.array(sig, dtype=np.uint32).tobytes()
        with pytest.raises(ValueError, match="only one"):
            MinHashCustom(minhash_bytes=packed, minhash_signature=sig)


class TestMinHashCustomSetGet:
    def test_set_and_get_minhash(self):
        mh = MinHashCustom()
        sig = [5, 10, 15]
        mh.setMinHash(sig)
        raw = mh.getMinHash()
        assert raw == np.array(sig, dtype=np.uint32).tobytes()
        assert mh.getMinHashInt() == sig

    def test_minhash_int_truncation(self):
        mh = MinHashCustom(minhash_bits=8)
        # Values > 256 should be truncated mod 2^8
        mh.setMinHash([300, 500, 256])
        for val in mh.minhash_int:
            assert 0 <= val < 256


class TestMinHashCustomHashData:
    def test_hash_data_string(self):
        result = MinHashCustom.hashData("hello", 42)
        assert isinstance(result, int)
        assert 0 <= result <= 0xFFFFFFFF

    def test_hash_data_bytes(self):
        result = MinHashCustom.hashData(b"bytes", 42)
        assert isinstance(result, int)
        assert 0 <= result <= 0xFFFFFFFF

    def test_hash_data_list(self):
        result = MinHashCustom.hashData([1, 2, 3], 42)
        assert isinstance(result, int)
        assert 0 <= result <= 0xFFFFFFFF

    def test_hash_data_unsupported_type(self):
        with pytest.raises(NotImplementedError, match="Type not supported"):
            MinHashCustom.hashData(123, 42)

    def test_hash_data_deterministic(self):
        assert MinHashCustom.hashData("test", 7) == MinHashCustom.hashData("test", 7)


class TestMinHashCustomScore:
    def test_score_identical(self):
        sig = [1, 2, 3, 4, 5]
        mh1 = MinHashCustom(minhash_signature=sig)
        mh2 = MinHashCustom(minhash_signature=sig)
        score = MinHashCustom.calculateMinHashScore(
            mh1.getMinHash(), mh2.getMinHash()
        )
        assert score == 100.0

    def test_score_different(self):
        mh1 = MinHashCustom(minhash_signature=[1, 2, 3, 4, 5])
        mh2 = MinHashCustom(minhash_signature=[6, 7, 8, 9, 10])
        score = MinHashCustom.calculateMinHashScore(
            mh1.getMinHash(), mh2.getMinHash()
        )
        assert score < 100.0

    def test_score_against(self):
        sig1 = [1, 2, 3, 4, 5]
        sig2 = [1, 2, 99, 4, 5]
        mh1 = MinHashCustom(minhash_signature=sig1)
        mh2 = MinHashCustom(minhash_signature=sig2)
        instance_score = mh1.scoreAgainst(mh2)
        static_score = MinHashCustom.calculateMinHashScore(
            mh1.getMinHash(), mh2.getMinHash()
        )
        assert instance_score == static_score


class TestMinHashCustomBitModes:
    def test_8bit_mode(self):
        mh = MinHashCustom(minhash_bits=8)
        mh.setMinHash([10, 20, 30])
        raw = mh.getMinHash()
        arr = np.frombuffer(raw, dtype=np.uint8)
        assert list(arr) == [10, 20, 30]

    def test_32bit_mode(self):
        mh = MinHashCustom(minhash_bits=32)
        mh.setMinHash([10, 20, 30])
        raw = mh.getMinHash()
        arr = np.frombuffer(raw, dtype=np.uint32)
        assert list(arr) == [10, 20, 30]


# ============================================================================
# 2b. MinHasher
# ============================================================================


class MockILNode:
    """Mock IL node with operation and operands for normalization."""
    def __init__(self, operation, operands=None):
        self.operation = operation
        self.operands = operands or []


class MockLLILBasicBlock:
    """Mock LLIL basic block that yields IL instructions."""
    def __init__(self, instructions):
        self._instructions = instructions

    def __iter__(self):
        return iter(self._instructions)


class MockLLILFunction:
    """Mock LLIL function with basic blocks."""
    def __init__(self, basic_blocks):
        self.basic_blocks = basic_blocks


# Import MinHasher after we know the module can handle the import
from redb.extractors.decompiler.bninja.similarity.minhasher import (
    MinHasher,
    MINHASH_SIGNATURE_LENGTH,
    MINHASH_SIGNATURE_BITS,
)


class TestMinHasherMakeNgrams:
    def setup_method(self):
        # Create a minimal minhasher with a mock LLIL function
        empty_func = MockLLILFunction([])
        self.hasher = MinHasher(seed=42, il_function=empty_func)

    def test_make_ngrams_basic(self):
        result = self.hasher.make_ngrams(["a", "b", "c", "d"], n=3)
        assert result == [("a", "b", "c"), ("b", "c", "d")]

    def test_make_ngrams_short_input(self):
        result = self.hasher.make_ngrams(["a", "b"], n=3)
        assert result == []

    def test_make_ngrams_exact_n(self):
        result = self.hasher.make_ngrams(["a", "b", "c"], n=3)
        assert result == [("a", "b", "c")]


class TestMinHasherCalculate:
    def _make_llil_function(self, num_instructions=10):
        """Create a mock LLIL function with enough instructions."""
        instructions = [
            MockILNode(operation=i % 20) for i in range(num_instructions)
        ]
        bb = MockLLILBasicBlock(instructions)
        return MockLLILFunction([bb])

    def test_calculate_minhash_empty_function(self):
        # Function with < 3 LLIL instructions -> empty list
        func = self._make_llil_function(num_instructions=2)
        hasher = MinHasher(seed=42, il_function=func)
        result = hasher.calculateMinHash()
        assert result == []

    def test_calculate_minhash_deterministic(self):
        func = self._make_llil_function(num_instructions=20)
        h1 = MinHasher(seed=42, il_function=func)
        h2 = MinHasher(seed=42, il_function=func)
        assert h1.calculateMinHash() == h2.calculateMinHash()

    def test_calculate_minhash_length(self):
        func = self._make_llil_function(num_instructions=20)
        hasher = MinHasher(seed=42, il_function=func)
        result = hasher.calculateMinHash()
        assert len(result) == MINHASH_SIGNATURE_LENGTH

    def test_calculate_minhash_value_range(self):
        func = self._make_llil_function(num_instructions=20)
        hasher = MinHasher(seed=42, il_function=func)
        result = hasher.calculateMinHash()
        for val in result:
            assert 0 <= val < 2 ** MINHASH_SIGNATURE_BITS

    def test_shingle_hash_deterministic(self):
        func = self._make_llil_function(num_instructions=5)
        hasher = MinHasher(seed=42, il_function=func)
        shingle = ([1, 2], [3, 4], [5, 6])
        assert hasher.shingle_hash(shingle, 99) == hasher.shingle_hash(shingle, 99)

    def test_seed_reproducibility(self):
        func = self._make_llil_function(num_instructions=20)
        h1 = MinHasher(seed=1, il_function=func)
        h2 = MinHasher(seed=2, il_function=func)
        r1 = h1.calculateMinHash()
        r2 = h2.calculateMinHash()
        # Different seeds should (very likely) produce different results
        assert r1 != r2