Ofer Pasternak

35 papers Journal 24Unranked 7

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	A Novel Dual-Stream Framework for dMRI Tractography Streamline Classification with Joint dMRI and fMRI Data. CoRR Haotian Yan, Bocheng Guo, Jianzhong He, Nir A. Sochen, Ofer Pasternak, Lauren J. O'Donnell, Fan Zhang
2025	J	`jnl`	Cross-Population White Matter Atlas Creation for Concurrent Mapping of Brain Connections in Neonates and Adults with Diffusion MRI Tractography. CoRR Wei Zhang, Yijie Li, Ruixi Zheng, Nir A. Sochen, Yuqian Chen, Leo R. Zekelman, Ofer Pasternak, Jarrett Rushmore, Yogesh Rathi, Nikos Makris, Lauren J. O'Donnell, Fan Zhang
2025	J	`jnl`	DDCSR: A Novel End-to-End Deep Learning Framework for Cortical Surface Reconstruction from Diffusion MRI. CoRR Chengjin Li, Yuqian Chen, Nir A. Sochen, Wei Zhang, Carl-Fredrik Westin, Yogesh Rathi, Lauren J. O'Donnell, Ofer Pasternak, Fan Zhang
2025	J	`jnl`	DDEvENet: Evidence-based ensemble learning for uncertainty-aware brain parcellation using diffusion MRI. Comput. Medical Imaging Graph. Chenjun Li, Dian Yang, Shun Yao, Shuyue Wang, Ye Wu, Le Zhang, Qiannuo Li, Kang Ik Kevin Cho, Johanna Seitz-Holland, Lipeng Ning, Jon Haitz Legarreta, Yogesh Rathi, Carl-Fredrik Westin, Lauren J. O'Donnell, Nir A. Sochen, Ofer Pasternak, Fan Zhang
2025	J	`jnl`	Improving Quality Control Of MRI Images Using Synthetic Motion Data. CoRR Charles Bricout, Kang Ik Kevin Cho, Michael Harms, Ofer Pasternak, Carrie E. Bearden, Patrick D. McGorry, Rene S. Kahn, John Kane, Barnaby Nelson, Scott W. Woods, Martha Elizabeth Shenton, Sylvain Bouix, Samira Ebrahimi Kahou
2025	—	`conf`	Improving Quality Control of MRI Images Using Synthetic Motion Data. ISBI Charles Bricout, Kang Ik Kevin Cho, Michael Harms, Ofer Pasternak, Carrie E. Bearden, Patrick D. McGorry, Rene S. Kahn, JM Kane, B. Nelson, Scott W. Woods, Martha Elizabeth Shenton, Sylvain Bouix, Samira Ebrahimi Kahou
2024	J	`jnl`	DDParcel: Deep Learning Anatomical Brain Parcellation From Diffusion MRI. IEEE Trans. Medical Imaging Fan Zhang, Kang Ik Kevin Cho, Johanna Seitz-Holland, Lipeng Ning, Jon Haitz Legarreta, Yogesh Rathi, Carl-Fredrik Westin, Lauren J. O'Donnell, Ofer Pasternak
2024	J	`jnl`	EVENet: Evidence-based Ensemble Learning for Uncertainty-aware Brain Parcellation Using Diffusion MRI. CoRR Chenjun Li, Dian Yang, Shun Yao, Shuyue Wang, Ye Wu, Le Zhang, Qiannuo Li, Kang Ik Kevin Cho, Johanna Seitz-Holland, Lipeng Ning, Jon Haitz Legarreta, Yogesh Rathi, Carl-Fredrik Westin, Lauren J. O'Donnell, Nir A. Sochen, Ofer Pasternak, Fan Zhang
2022	J	`jnl`	Cross-site harmonization of multi-shell diffusion MRI measures based on rotational invariant spherical harmonics (RISH). NeuroImage Alberto De Luca, Suheyla Cetin Karayumak, Alexander Leemans, Yogesh Rathi, Stephan P. Swinnen, Jolien Gooijers, Amanda Clauwaert, Roald Bahr, Stian Bahr Sandmo, Nir A. Sochen, David Kaufmann, Marc Muehlmann, Geert Jan Biessels, Inga Koerte, Ofer Pasternak
2022	J	`jnl`	Free water diffusion MRI and executive function with a speed component in healthy aging. NeuroImage Martin Berger, Lukas Pirpamer, Edith Hofer, Stefan Ropele, Marco Duering, Benno Gesierich, Ofer Pasternak, Christian Enzinger, Reinhold Schmidt, Marisa Koini
2021	J	`jnl`	Deep learning based segmentation of brain tissue from diffusion MRI. NeuroImage Fan Zhang, Anna Breger, Kang Ik Kevin Cho, Lipeng Ning, Carl-Fredrik Westin, Lauren J. O'Donnell, Ofer Pasternak
2021	J	`jnl`	MK-Curve improves sensitivity to identify white matter alterations in clinical high risk for psychosis. NeuroImage Fan Zhang, Kang Ik Kevin Cho, Yingying Tang, Tianhong Zhang, Sinead Kelly, Maria Di Biase, Lihua Xu, Huijun Li, Keshevan Matcheri, Susan L. Whitfield-Gabrieli, Margaret Niznikiewicz, William S. Stone, Jijun Wang, Martha Elizabeth Shenton, Ofer Pasternak
2020	J	`jnl`	The association of white matter free water with cognition in older adults. NeuroImage Joseph M. Gullett, Andrew M. O'Shea, Damon G. Lamb, Eric C. Porges, Deirdre M. O'Shea, Ofer Pasternak, Ronald A. Cohen, Adam J. Woods
2019	J	`jnl`	MK-curve - Characterizing the relation between mean kurtosis and alterations in the diffusion MRI signal. NeuroImage Fan Zhang, Lipeng Ning, Lauren J. O'Donnell, Ofer Pasternak
2018	J	`jnl`	Advances in microstructural diffusion neuroimaging for psychiatric disorders. NeuroImage Ofer Pasternak, Sinead Kelly, Valerie J. Sydnor, Martha Elizabeth Shenton
2018	—	`conf`	Characterizing Peritumoral Tissue Using DTI-Based Free Water Elimination. BrainLes@MICCAI (1) Abdol Aziz Ould Ismail, Drew Parker, Moisés Hernández-Fernández, Steven Brem, Simon Alexander, Ofer Pasternak, Emmanuel Caruyer, Ragini Verma
2017	—	`conf`	"Evaluating Acquisition Time of rfMRI in the Human Connectome Project for Early Psychosis. How Much Is Enough?". CNI@MICCAI Sylvain Bouix, Sophia Swago, John D. West, Ofer Pasternak, Alan Breier, Martha Elizabeth Shenton
2017	J	`jnl`	Separating blood and water: Perfusion and free water elimination from diffusion MRI in the human brain. NeuroImage Anna S. Rydhög, Filip Szczepankiewicz, Ronnie Wirestam, André Ahlgren, Carl-Fredrik Westin, Linda Knutsson, Ofer Pasternak
2016	J	`jnl`	Corticospinal tract modeling for neurosurgical planning by tracking through regions of peritumoral edema and crossing fibers using two-tensor unscented Kalman filter tractography. Int. J. Comput. Assist. Radiol. Surg. Zhenrui Chen, Yanmei Tie, Olutayo I. Olubiyi, Fan Zhang, Alireza Mehrtash, Laura Rigolo, Pegah Kahali, Isaiah Norton, Ofer Pasternak, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell
2016	J	`jnl`	Inter-site and inter-scanner diffusion MRI data harmonization. NeuroImage Hengameh Mirzaalian, Lipeng Ning, Peter Savadjiev, Ofer Pasternak, Sylvain Bouix, Oleg V. Michailovich, Gerald Grant, Christine E. Marx, Rajendra A. Morey, Laura A. Flashman, Marie St. George, Thomas W. McAllister, Norberto Andaluz, Lori Shutter, Raul Coimbra, Ross D. Zafonte, Michael J. Coleman, Marek Kubicki, Carl-Fredrik Westin, Murray B. Stein, Martha Elizabeth Shenton, Yogesh Rathi
2016	J	`jnl`	Q-space trajectory imaging for multidimensional diffusion MRI of the human brain. NeuroImage Carl-Fredrik Westin, Hans Knutsson, Ofer Pasternak, Filip Szczepankiewicz, Evren Özarslan, Danielle van Westen, Cecilia Mattisson, Mats Bogren, Lauren J. O'Donnell, Marek Kubicki, Daniel Topgaard, Markus Nilsson
2015	—	`conf`	Harmonizing Diffusion MRI Data Across Multiple Sites and Scanners. MICCAI (1) Hengameh Mirzaalian, Amicie de Pierrefeu, Peter Savadjiev, Ofer Pasternak, Sylvain Bouix, Marek Kubicki, Carl-Fredrik Westin, Martha Elizabeth Shenton, Yogesh Rathi
2014	—	`conf`	Measurement Tensors in Diffusion MRI: Generalizing the Concept of Diffusion Encoding. MICCAI (3) Carl-Fredrik Westin, Filip Szczepankiewicz, Ofer Pasternak, Evren Özarslan, Daniel Topgaard, Hans Knutsson, Markus Nilsson
2014	—	`ch.`	The Estimation of Free-Water Corrected Diffusion Tensors. Visualization and Processing of Tensors and Higher Order Descriptors for Multi-Valued Data Ofer Pasternak, Klaus H. Maier-Hein, Christian F. Baumgartner, Martha Elizabeth Shenton, Yogesh Rathi, Carl-Fredrik Westin
2012	—	`conf`	Estimation of Extracellular Volume from Regularized Multi-shell Diffusion MRI. MICCAI (2) Ofer Pasternak, Martha Elizabeth Shenton, Carl-Fredrik Westin
2012	J	`jnl`	How and how not to correct for CSF-contamination in diffusion MRI. NeuroImage Claudia Metzler-Baddeley, Michael J. O'Sullivan, Sonya Bells, Ofer Pasternak, Derek K. Jones
2012	—	`ch.`	SPD Tensors Regularization via Iwasawa Decomposition. Mathematical Methods for Signal and Image Analysis and Representation Yaniv Gur, Ofer Pasternak, Nir A. Sochen
2010	J	`jnl`	Structural correlates of memory performance with diffusion tensor imaging. NeuroImage Efrat Sasson, Glen M. Doniger, Ofer Pasternak, Yaniv Assaf
2010	J	`jnl`	The effect of metric selection on the analysis of diffusion tensor MRI data. NeuroImage Ofer Pasternak, Nir A. Sochen, Peter J. Basser
2009	J	`jnl`	Cluster analysis of resting-state fMRI time series. NeuroImage Aviv A. Mezer, Yossi Yovel, Ofer Pasternak, Tali Gorfine, Yaniv Assaf
2009	J	`jnl`	Fast Int. J. Comput. Vis. Yaniv Gur, Ofer Pasternak, Nir A. Sochen
2009	—	`—`	Feature extraction from diffusion MRI of complex brain architecture Ofer Pasternak
2006	J	`jnl`	Characterization of displaced white matter by brain tumors using combined DTI and fMRI. NeuroImage Tom Schonberg, Pazit Pianka, Talma Hendler, Ofer Pasternak, Yaniv Assaf
2006	—	`ch.`	Variational Regularization of Multiple Diffusion Tensor Fields. Visualization and Processing of Tensor Fields Ofer Pasternak, Nir A. Sochen, Yaniv Assaf
2005	—	`conf`	Neuronal Fiber Delineation in Area of Edema from Diffusion Weighted MRI. NIPS Ofer Pasternak, Nir A. Sochen, Nathan Intrator, Yaniv Assaf