Nirupama Benis

13 papers Misc 1Journal 7Unranked 5

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	FAIR in practice: minimum metadata schema for bioinformatics analytics by machines. SWAT4HCLS Daphne Wijnbergen, Núria Queralt-Rosinach, Valérie Barbié, Emma Verkinderen, Nirupama Benis, Annika Jacobsen, Peter A. C. 't Hoen, Claudio Carta, Marco Roos, Eleni Mina
2024	J	`jnl`	Building Expertise on FAIR Through Evolving Bring Your Own Data (BYOD) Workshops: Describing the Data, Software, and Management-focused Approaches and Their Evolution. Data Intell. César Henrique Bernabé, Lieze Thielemans, Rajaram Kaliyaperumal, Claudio Carta, Shuxin Zhang, Celia W. G. van Gelder, Nirupama Benis, Luiz Olavo Bonino da Silva Santos, Ronald Cornet, Bruna dos Santos Vieira, Nawel Lalout, Inês Henriques, Alberto Cámara Ballesteros, Kees Burger, Martijn G. Kersloot, Friederike Ehrhart, Esther van Enckevort, Chris T. A. Evelo, Alasdair J. G. Gray, Marc Hanauer, Kristina M. Hettne, Joep de Ligt, Arnaldo Pereira, Núria Queralt-Rosinach, Erik Schultes, Domenica Taruscio, Andra Waagmeester, Mark D. Wilkinson, Egon L. Willighagen, Mascha Jansen, Barend Mons, Marco Roos, Annika Jacobsen
2023	J	`jnl`	A Resource for Guiding Data Stewards to Make European Rare Disease Patient Registries FAIR. Data Sci. J. Philip van Damme, Pablo Alarcón Moreno, César Henrique Bernabé, Alberto Cámara Ballesteros, Clémence M. A. Le Cornec, Bruna dos Santos Vieira, K. Joeri van der Velde, Shuxin Zhang, Claudio Carta, Ronald Cornet, Peter A. C. 't Hoen, Annika Jacobsen, Morris A. Swertz, Marco Roos, Nirupama Benis
2023	J	`jnl`	Assessing resolvability, parsability, and consistency of RDF resources: a use case in rare diseases. J. Biomed. Semant. Shuxin Zhang, Nirupama Benis, Ronald Cornet
2023	J	`jnl`	Automated approach for quality assessment of RDF resources. BMC Medical Informatics Decis. Mak. Shuxin Zhang, Nirupama Benis, Ronald Cornet
2023	—	`conf`	Surveyed common data access policies preferences amongst European Reference Networks. SWAT4HCLS Alberto Cámara Ballesteros, Nirupama Benis, César Henrique Bernabé, Inés de Oliveira Coelho, Clémence M. A. Le Cornec, Aylin Demir, Bruna dos Santos Vieira, Jose Antonio Ramírez, K. Joeri van der Velde, Shuxin Zhang, Ronald Cornet, Annika Jacobsen, Marco Roos, Franz Schaefer, Morris A. Swertz, Mark D. Wilkinson
2022	Misc	`conf`	Leveraging Biolink for Interoperability between Semantic Models. AMIA Ian R. Braun, Pablo Alarcón Moreno, Emily Hartley, Daniel Olson, Nirupama Benis, Ronald Cornet, Mark D. Wilkinson, Ramona L. Walls
2022	J	`jnl`	Performance assessment of ontology matching systems for FAIR data. J. Biomed. Semant. Philip van Damme, Jesualdo Tomás Fernández-Breis, Nirupama Benis, José Antonio Miñarro-Giménez, Nicolette F. de Keizer, Ronald Cornet
2022	J	`jnl`	Semantic modelling of common data elements for rare disease registries, and a prototype workflow for their deployment over registry data. J. Biomed. Semant. Rajaram Kaliyaperumal, Mark D. Wilkinson, Pablo Alarcón Moreno, Nirupama Benis, Ronald Cornet, Bruna dos Santos Vieira, Michel Dumontier, César Henrique Bernabé, Annika Jacobsen, Clémence M. A. Le Cornec, Mario Prieto Godoy, Núria Queralt-Rosinach, Leo J. Schultze Kool, Morris A. Swertz, Philip van Damme, K. Joeri van der Velde, Nawel Lalout, Shuxin Zhang, Marco Roos
2021	—	`conf`	Assessing Resolvability and Consistency in OBO Foundry Ontologies: Pilot Study. EFMI-STC Shuxin Zhang, Nirupama Benis, Ronald Cornet
2016	J	`jnl`	Building pathway graphs from BioPAX data in R. F1000Research Nirupama Benis, Dirkjan Schokker, Frank Kramer, Mari A. Smits, María Suárez-Diez
2012	—	`conf`	Ontology-Driven Construction of Domain Corpus with Frame Semantics Annotations. CICLing (1) He Tan, Rajaram Kaliyaperumal, Nirupama Benis
2011	—	`conf`	Building frame-based corpus on the basis of ontological domain knowledge. BioNLP@ACL He Tan, Rajaram Kaliyaperumal, Nirupama Benis